#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
Ymf56|P.octaurelia-Sample_1038	Ymf56|Sample_C026	0.202703	0.733025	0.27653	300	54.1572	245.843	69	25.3333	43.6667
Ymf56|P.octaurelia-Sample_1038	Ymf56|P.multimicronucleatum-Sample_M04	0.213867	0.861596	0.248222	270	48.3176	221.682	66	24.75	41.25
Ymf56|P.octaurelia-Sample_1038	Ymf56|Sample_M13	0.24858	1.06646	0.233089	297	53.5966	243.403	82	30.5	51.5
Ymf56|P.octaurelia-Sample_1038	Ymf56|P.tetraurelia-Sample_291	0.0987308	0.432425	0.228319	435	83.6802	351.32	60	27.5	32.5
Ymf56|P.octaurelia-Sample_1038	Ymf56|Sample_Peniche3I	0.292999	0.902496	0.324653	303	54.9358	248.064	89	28.8333	60.1667
Ymf56|P.octaurelia-Sample_1038	Ymf56|P.sexaurelia-Sample_130	0.0340968	NA	NA	234	39	195	42	35.5	6.5
Ymf56|P.octaurelia-Sample_1038	Ymf56|P.biaurelia-Sample_379	0.0299903	0.90282	0.0332185	246	41.9086	204.091	28	22	6
Ymf56|P.octaurelia-Sample_1038	Ymf56|P.caudatum-Sample_C104	0.188792	1.52958	0.123427	294	51.347	242.653	74	33.5	40.5
Ymf56|Sample_C026	Ymf56|P.multimicronucleatum-Sample_M04	0.277101	0.468557	0.591392	273	49.2657	223.734	69	17.1667	51.8333
Ymf56|Sample_C026	Ymf56|Sample_M13	0.385654	0.376187	1.02517	273	55.2135	217.787	82	16.3333	65.6667
Ymf56|Sample_C026	Ymf56|P.tetraurelia-Sample_291	0.363435	0.166872	2.17793	273	55.1429	217.857	71	8.25	62.75
Ymf56|Sample_C026	Ymf56|Sample_Peniche3I	0.323836	0.19912	1.62634	246	41.9337	204.066	61	7.33333	53.6667
Ymf56|Sample_C026	Ymf56|P.sexaurelia-Sample_130	0.136352	NA	NA	231	38.5	192.5	57	33	24
Ymf56|Sample_C026	Ymf56|P.biaurelia-Sample_379	0.120587	1.19423	0.100975	243	41.0105	201.989	47	24.5	22.5
Ymf56|Sample_C026	Ymf56|P.caudatum-Sample_C104	0.0707008	0.566669	0.124766	318	56.1578	261.842	40	22.3333	17.6667
Ymf56|P.multimicronucleatum-Sample_M04	Ymf56|Sample_M13	0.133064	0.576301	0.230894	279	53.458	225.542	49	21.5	27.5
Ymf56|P.multimicronucleatum-Sample_M04	Ymf56|P.tetraurelia-Sample_291	0.218656	0.694298	0.314931	252	46.3762	205.624	60	21	39
Ymf56|P.multimicronucleatum-Sample_M04	Ymf56|Sample_Peniche3I	0.17636	0.0292238	6.03481	252	43.6121	208.388	34	1.25	32.75
Ymf56|P.multimicronucleatum-Sample_M04	Ymf56|P.sexaurelia-Sample_130	0.239195	NA	NA	228	40.0149	187.985	73	34.5	38.5
Ymf56|P.multimicronucleatum-Sample_M04	Ymf56|P.biaurelia-Sample_379	0.217048	1.47968	0.146686	240	43.234	196.766	65	27.9167	37.0833
Ymf56|P.multimicronucleatum-Sample_M04	Ymf56|P.caudatum-Sample_C104	0.37385	0.254828	1.46707	240	46.6714	193.329	67	10.0833	56.9167
Ymf56|Sample_M13	Ymf56|P.tetraurelia-Sample_291	0.353891	0.258758	1.36765	267	52.5497	214.45	72	11.5	60.5
Ymf56|Sample_M13	Ymf56|Sample_Peniche3I	0.0846428	0.164161	0.51561	282	50.8692	231.131	26	7.5	18.5
Ymf56|Sample_M13	Ymf56|P.sexaurelia-Sample_130	0.219368	NA	NA	228	40.4764	187.524	71	35.3333	35.6667
Ymf56|Sample_M13	Ymf56|P.biaurelia-Sample_379	0.315312	0.211133	1.49343	210	41.6627	168.337	51	7.66667	43.3333
Ymf56|Sample_M13	Ymf56|P.caudatum-Sample_C104	0.443063	0.467427	0.947877	264	50.7889	213.211	89	17.6667	71.3333
Ymf56|P.tetraurelia-Sample_291	Ymf56|Sample_Peniche3I	0.290841	0.433849	0.670372	279	53.6277	225.372	72	17.6667	54.3333
Ymf56|P.tetraurelia-Sample_291	Ymf56|P.sexaurelia-Sample_130	0.104096	NA	NA	234	38.5171	195.483	55	36	19
Ymf56|P.tetraurelia-Sample_291	Ymf56|P.biaurelia-Sample_379	0.0806053	0.937096	0.086016	243	40.1865	202.814	37	21.5	15.5
Ymf56|P.tetraurelia-Sample_291	Ymf56|P.caudatum-Sample_C104	0.390076	0.17139	2.27595	267	54.3889	212.611	73	8.33333	64.6667
Ymf56|Sample_Peniche3I	Ymf56|P.sexaurelia-Sample_130	0.229054	NA	NA	225	39.2343	185.766	70	33.3333	36.6667
Ymf56|Sample_Peniche3I	Ymf56|P.biaurelia-Sample_379	0.244913	0.970528	0.25235	237	43.1685	193.832	64	23.5	40.5
Ymf56|Sample_Peniche3I	Ymf56|P.caudatum-Sample_C104	0.35235	0.361925	0.973546	255	51.3755	203.624	72	14.75	57.25
Ymf56|P.sexaurelia-Sample_130	Ymf56|P.biaurelia-Sample_379	0.0422663	NA	NA	234	39.3406	194.659	40	32	8
Ymf56|P.sexaurelia-Sample_130	Ymf56|P.caudatum-Sample_C104	0.136088	NA	NA	231	38.1593	192.841	53	29	24
Ymf56|P.biaurelia-Sample_379	Ymf56|P.caudatum-Sample_C104	0.338227	0.12736	2.65568	219	42.6864	176.314	53	5	48
#Average Ka: 0.243924107143
#Average Ks: 0.590642671429
#Average KaKs: 0.948103696429