module load hmmer/3.0; hmmscan --cpu 16 -o /N/dc2/projects/marinovg/genomes/Ciliates/Paramecium_sonneborni-ATCC_30995/psonneborni_ATCC_30995_annotation_v1.0.ORF.PFAM27-A --tblout /N/dc2/projects/marinovg/genomes/Ciliates/Paramecium_sonneborni-ATCC_30995/psonneborni_ATCC_30995_annotation_v1.0.ORF..PFAM27-A.tblout /N/dc2/projects/marinovg/genomes/PFam/PFam27.0/Pfam-A.hmm /N/dc2/projects/marinovg/genomes/Ciliates/Paramecium_sonneborni-ATCC_30995/psonneborni_ATCC_30995_annotation_v1.0.ORF.faa