cd /N/dc2/projects/marinovg/2015-05-15-Teredinibacter-annotation; /N/dc2/projects/marinovg/programs/infernal-1.1.1-linux-intel-gcc/binaries/cmscan /N/dc2/projects/marinovg/genomes/Rfam/Rfam12/Rfam.cm Teredinibacter_sp._1162T.S.0a.05-ASM96424v1/GCA_000964245.1_ASM96424v1_genomic.fna > Teredinibacter_sp._1162T.S.0a.05-ASM96424v1/GCA_000964245.1_ASM96424v1_genomic.RFAM12-cmscan &
cd /N/dc2/projects/marinovg/2015-05-15-Teredinibacter-annotation; /N/dc2/projects/marinovg/programs/infernal-1.1.1-linux-intel-gcc/binaries/cmscan /N/dc2/projects/marinovg/genomes/Rfam/Rfam12/Rfam.cm Teredinibacter_sp._991H.S.0a.06-ASM96425v1/GCA_000964255.1_ASM96425v1_genomic.fna > Teredinibacter_sp._991H.S.0a.06-ASM96425v1/GCA_000964255.1_ASM96425v1_genomic.RFAM12-cmscan &
cd /N/dc2/projects/marinovg/2015-05-15-Teredinibacter-annotation; /N/dc2/projects/marinovg/programs/infernal-1.1.1-linux-intel-gcc/binaries/cmscan /N/dc2/projects/marinovg/genomes/Rfam/Rfam12/Rfam.cm Teredinibacter_turnerae_1133Y.S.0a.04-ASM62042v1/GCA_000620425.1_ASM62042v1_genomic.fna > Teredinibacter_turnerae_1133Y.S.0a.04-ASM62042v1/GCA_000620425.1_ASM62042v1_genomic.RFAM12-cmscan &
cd /N/dc2/projects/marinovg/2015-05-15-Teredinibacter-annotation; /N/dc2/projects/marinovg/programs/infernal-1.1.1-linux-intel-gcc/binaries/cmscan /N/dc2/projects/marinovg/genomes/Rfam/Rfam12/Rfam.cm Teredinibacter_turnerae_T0609-ASM37292v1/GCA_000372925.1_ASM37292v1_genomic.fna > Teredinibacter_turnerae_T0609-ASM37292v1/GCA_000372925.1_ASM37292v1_genomic.RFAM12-cmscan &
cd /N/dc2/projects/marinovg/2015-05-15-Teredinibacter-annotation; /N/dc2/projects/marinovg/programs/infernal-1.1.1-linux-intel-gcc/binaries/cmscan /N/dc2/projects/marinovg/genomes/Rfam/Rfam12/Rfam.cm Teredinibacter_turnerae_T7901-ASM2302v1/GCA_000023025.1_ASM2302v1_genomic.fna > Teredinibacter_turnerae_T7901-ASM2302v1/GCA_000023025.1_ASM2302v1_genomic.RFAM12-cmscan &
cd /N/dc2/projects/marinovg/2015-05-15-Teredinibacter-annotation; /N/dc2/projects/marinovg/programs/infernal-1.1.1-linux-intel-gcc/binaries/cmscan /N/dc2/projects/marinovg/genomes/Rfam/Rfam12/Rfam.cm Teredinibacter_turnerae_T7902-ASM37916v1/GCA_000379165.1_ASM37916v1_genomic.fna > Teredinibacter_turnerae_T7902-ASM37916v1/GCA_000379165.1_ASM37916v1_genomic.RFAM12-cmscan &
cd /N/dc2/projects/marinovg/2015-05-15-Teredinibacter-annotation; /N/dc2/projects/marinovg/programs/infernal-1.1.1-linux-intel-gcc/binaries/cmscan /N/dc2/projects/marinovg/genomes/Rfam/Rfam12/Rfam.cm Teredinibacter_turnerae_T8402-ASM38164v1/GCA_000381645.1_ASM38164v1_genomic.fna > Teredinibacter_turnerae_T8402-ASM38164v1/GCA_000381645.1_ASM38164v1_genomic.RFAM12-cmscan &
cd /N/dc2/projects/marinovg/2015-05-15-Teredinibacter-annotation; /N/dc2/projects/marinovg/programs/infernal-1.1.1-linux-intel-gcc/binaries/cmscan /N/dc2/projects/marinovg/genomes/Rfam/Rfam12/Rfam.cm Teredinibacter_turnerae_T8412-ASM38166v1/GCA_000381665.1_ASM38166v1_genomic.fna > Teredinibacter_turnerae_T8412-ASM38166v1/GCA_000381665.1_ASM38166v1_genomic.RFAM12-cmscan &
cd /N/dc2/projects/marinovg/2015-05-15-Teredinibacter-annotation; /N/dc2/projects/marinovg/programs/infernal-1.1.1-linux-intel-gcc/binaries/cmscan /N/dc2/projects/marinovg/genomes/Rfam/Rfam12/Rfam.cm Teredinibacter_turnerae_T8415-ASM42760v1/GCA_000427605.1_ASM42760v1_genomic.fna > Teredinibacter_turnerae_T8415-ASM42760v1/GCA_000427605.1_ASM42760v1_genomic.RFAM12-cmscan &
cd /N/dc2/projects/marinovg/2015-05-15-Teredinibacter-annotation; /N/dc2/projects/marinovg/programs/infernal-1.1.1-linux-intel-gcc/binaries/cmscan /N/dc2/projects/marinovg/genomes/Rfam/Rfam12/Rfam.cm Teredinibacter_turnerae_T8513-ASM42680v1/GCA_000426805.1_ASM42680v1_genomic.fna > Teredinibacter_turnerae_T8513-ASM42680v1/GCA_000426805.1_ASM42680v1_genomic.RFAM12-cmscan &
cd /N/dc2/projects/marinovg/2015-05-15-Teredinibacter-annotation; /N/dc2/projects/marinovg/programs/infernal-1.1.1-linux-intel-gcc/binaries/cmscan /N/dc2/projects/marinovg/genomes/Rfam/Rfam12/Rfam.cm Teredinibacter_turnerae_T8602-ASM37232v1/GCA_000372325.1_ASM37232v1_genomic.fna > Teredinibacter_turnerae_T8602-ASM37232v1/GCA_000372325.1_ASM37232v1_genomic.RFAM12-cmscan &