python /home/users/marinovg/code/ChIP/TFOverlapMatrix.py peak_calls.IDR_5e-2.narrowPeak.files peak_calls.GEM.narrowPeak.files peak_calls.IDR_5e-2-vs-GEM.table
python /home/users/marinovg/code/ChIP/TFOverlapMatrix.py peak_calls.IDR_5e-2.narrowPeak.files peak_calls.GEM.narrowPeak.files peak_calls.IDR_5e-2-vs-GEM.minOL=0.25.table -minOverlap 0.25
python /home/users/marinovg/code/ChIP/TFOverlapMatrix.py peak_calls.IDR_5e-2.narrowPeak.files peak_calls.GEM.narrowPeak.files peak_calls.IDR_5e-2-vs-GEM.minOL=0.5.table -minOverlap 0.5
python /home/users/marinovg/code/ChIP/TFOverlapMatrix.py peak_calls.IDR_5e-2.narrowPeak.files peak_calls.GEM.narrowPeak.files peak_calls.IDR_5e-2-vs-GEM.minOL=0.75.table -minOverlap 0.75
python /home/users/marinovg/code/ChIP/TFOverlapMatrix.py peak_calls.IDR_5e-3.narrowPeak.files peak_calls.GEM.narrowPeak.files peak_calls.IDR_5e-3-vs-GEM.table
python /home/users/marinovg/code/ChIP/TFOverlapMatrix.py peak_calls.IDR_5e-3.narrowPeak.files peak_calls.GEM.narrowPeak.files peak_calls.IDR_5e-3-vs-GEM.minOL=0.25.table -minOverlap 0.25
python /home/users/marinovg/code/ChIP/TFOverlapMatrix.py peak_calls.IDR_5e-3.narrowPeak.files peak_calls.GEM.narrowPeak.files peak_calls.IDR_5e-3-vs-GEM.minOL=0.5.table -minOverlap 0.5
python /home/users/marinovg/code/ChIP/TFOverlapMatrix.py peak_calls.IDR_5e-3.narrowPeak.files peak_calls.GEM.narrowPeak.files peak_calls.IDR_5e-3-vs-GEM.minOL=0.75.table -minOverlap 0.75