Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 20000)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 51500)	% of Background Sequences with Motif
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e-247	-5.708e+02	0.0000	578.0	2.89%	51.5	0.10%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-9	-2.143e+01	0.0000	252.0	1.26%	377.8	0.76%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-7	-1.798e+01	0.0000	5731.0	28.66%	13230.0	26.59%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-7	-1.627e+01	0.0000	267.0	1.33%	439.9	0.88%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e-6	-1.425e+01	0.0001	285.0	1.43%	491.5	0.99%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-5	-1.373e+01	0.0002	480.0	2.40%	912.2	1.83%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e-4	-1.149e+01	0.0014	439.0	2.20%	848.3	1.70%
ANAC062(NAC)/colamp-ANAC062-DAP-Seq(GSE60143)/Homer	TACTTANTNWNYAAG	1e-4	-9.823e+00	0.0062	492.0	2.46%	987.5	1.98%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e-4	-9.242e+00	0.0099	967.0	4.83%	2084.8	4.19%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e-3	-8.717e+00	0.0151	3724.0	18.62%	8690.5	17.46%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e-3	-8.554e+00	0.0162	366.0	1.83%	723.3	1.45%
bZIP18(bZIP)/colamp-bZIP18-DAP-Seq(GSE60143)/Homer	KGMCAGCTND	1e-3	-8.546e+00	0.0162	9738.0	48.69%	23490.6	47.20%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-3	-8.265e+00	0.0183	2795.0	13.98%	6461.0	12.98%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e-3	-8.130e+00	0.0194	2622.0	13.11%	6048.3	12.15%
ANAC053(NAC)/colamp-ANAC053-DAP-Seq(GSE60143)/Homer	TDCTTGNNNNNCAAG	1e-3	-7.706e+00	0.0277	577.0	2.89%	1213.2	2.44%
ANAC092(NAC)/colamp-ANAC092-DAP-Seq(GSE60143)/Homer	WRCKTGWNNNWCAMG	1e-3	-7.125e+00	0.0464	414.0	2.07%	851.7	1.71%
ARF16(ARF)/col-ARF16-DAP-Seq(GSE60143)/Homer	ATTTTACGAT	1e-3	-7.080e+00	0.0464	136.0	0.68%	239.2	0.48%
NGA4(ABI3VP1)/col-NGA4-DAP-Seq(GSE60143)/Homer	TKNTCAGGTG	1e-2	-6.759e+00	0.0594	4303.0	21.52%	10189.5	20.48%
Unknown2/Drosophila-Promoters/Homer	CATCMCTA	1e-2	-6.743e+00	0.0594	2133.0	10.66%	4922.2	9.89%
ANAC058(NAC)/col-ANAC058-DAP-Seq(GSE60143)/Homer	TWCTTGTDNNACAAG	1e-2	-6.504e+00	0.0690	626.0	3.13%	1349.1	2.71%
ANAC011(NAC)/col-ANAC011-DAP-Seq(GSE60143)/Homer	TDCTTGYRNNDCAAG	1e-2	-6.245e+00	0.0852	413.0	2.07%	863.6	1.74%
ERF10(AP2EREBP)/col-ERF10-DAP-Seq(GSE60143)/Homer	RTGGCGGCGG	1e-2	-6.208e+00	0.0852	686.0	3.43%	1495.6	3.01%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e-2	-6.096e+00	0.0902	906.0	4.53%	2014.1	4.05%
SPL9(SBP)/colamp-SPL9-DAP-Seq(GSE60143)/Homer	BTGTACTT	1e-2	-5.892e+00	0.1061	2702.0	13.51%	6332.2	12.72%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e-2	-5.865e+00	0.1061	603.0	3.02%	1309.6	2.63%
DEL1(E2FDP)/colamp-DEL1-DAP-Seq(GSE60143)/Homer	TTCCCGCCAA	1e-2	-5.804e+00	0.1069	19.0	0.10%	18.4	0.04%
NTM2(NAC)/col-NTM2-DAP-Seq(GSE60143)/Homer	CTTRTNNNAYAAGBH	1e-2	-5.642e+00	0.1211	648.0	3.24%	1419.5	2.85%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e-2	-5.547e+00	0.1284	2529.0	12.65%	5928.4	11.91%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e-2	-5.523e+00	0.1284	195.0	0.97%	382.8	0.77%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e-2	-5.498e+00	0.1284	3493.0	17.46%	8276.9	16.63%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e-2	-5.451e+00	0.1284	2368.0	11.84%	5542.3	11.14%
GATA1(C2C2gata)/colamp-GATA1-DAP-Seq(GSE60143)/Homer	DDWWYYAGATCTRRW	1e-2	-5.442e+00	0.1284	419.0	2.10%	891.9	1.79%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-2	-5.374e+00	0.1295	2115.0	10.57%	4933.4	9.91%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e-2	-5.341e+00	0.1299	3169.0	15.85%	7494.5	15.06%
ANAC005(NAC)/col-ANAC005-DAP-Seq(GSE60143)/Homer	WVCTTVTWNHABAAG	1e-2	-5.337e+00	0.1299	639.0	3.19%	1405.9	2.83%
NTM1(NAC)/col-NTM1-DAP-Seq(GSE60143)/Homer	ACTTRTARAASAAGT	1e-2	-5.123e+00	0.1526	653.0	3.26%	1443.8	2.90%
DREF/Drosophila-Promoters/Homer	AVYTATCGATAD	1e-2	-5.071e+00	0.1564	22.0	0.11%	25.3	0.05%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-2	-4.785e+00	0.2028	5075.0	25.37%	12195.0	24.51%
CUC1(NAC)/col-CUC1-DAP-Seq(GSE60143)/Homer	TACTTGTNNNACAAG	1e-2	-4.775e+00	0.2028	450.0	2.25%	976.4	1.96%
ANAC071(NAC)/col-ANAC071-DAP-Seq(GSE60143)/Homer	DNCKTNDNNNHNAAG	1e-2	-4.688e+00	0.2122	928.0	4.64%	2106.9	4.23%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e-2	-4.628e+00	0.2198	129.0	0.65%	247.5	0.50%
Unknown3/Drosophila-Promoters/Homer	ACVAKCTGGCAGCGC	1e-2	-4.611e+00	0.2198	171.0	0.85%	340.9	0.69%
GATA6(C2C2gata)/col200-GATA6-DAP-Seq(GSE60143)/Homer	TAGATCTARAHH	1e-1	-4.537e+00	0.2295	158.0	0.79%	312.9	0.63%
NAC2(NAC)/colamp-NAC2-DAP-Seq(GSE60143)/Homer	TDCTTGNNNNNCAAG	1e-1	-4.435e+00	0.2485	741.0	3.71%	1669.3	3.35%
WUS1(Homeobox)/colamp-WUS1-DAP-Seq(GSE60143)/Homer	CAWTCATTCA	1e-1	-4.279e+00	0.2839	686.0	3.43%	1543.3	3.10%
At5g22890(C2H2)/col-At5g22890-DAP-Seq(GSE60143)/Homer	NSAGGTKWTATCTGD	1e-1	-4.267e+00	0.2839	48.0	0.24%	78.5	0.16%
AGL6(MADS)/col-AGL6-DAP-Seq(GSE60143)/Homer	TTWCCWWAWWDGGWA	1e-1	-4.246e+00	0.2839	176.0	0.88%	356.3	0.72%
CAMTA5(CAMTA)/col-CAMTA5-DAP-Seq(GSE60143)/Homer	ACGCGTTTTANACRC	1e-1	-4.236e+00	0.2839	260.0	1.30%	547.4	1.10%
At1g13300(G2like)/col-At1g13300-DAP-Seq(GSE60143)/Homer	GAATCTWAGATTCYN	1e-1	-4.188e+00	0.2856	18.0	0.09%	21.3	0.04%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e-1	-4.165e+00	0.2863	142.0	0.71%	281.3	0.57%
ANAC028(NAC)/col-ANAC028-DAP-Seq(GSE60143)/Homer	WRCTTGNNNNNCAAG	1e-1	-4.108e+00	0.2973	792.0	3.96%	1800.4	3.62%
VND6(NAC)/col-VND6-DAP-Seq(GSE60143)/Homer	DCTTNHTTTTYAMGY	1e-1	-4.072e+00	0.3021	1201.0	6.00%	2781.4	5.59%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e-1	-4.051e+00	0.3029	1314.0	6.57%	3054.9	6.14%
bZIP52(bZIP)/colamp-bZIP52-DAP-Seq(GSE60143)/Homer	NDNHCAGCTGTCANN	1e-1	-4.016e+00	0.3077	2355.0	11.77%	5580.5	11.21%
SMB(NAC)/colamp-SMB-DAP-Seq(GSE60143)/Homer	CTTVNNNNDBAAGHW	1e-1	-3.989e+00	0.3103	1032.0	5.16%	2378.5	4.78%
Unknown2/Arabidopsis-Promoters/Homer	AAACGACGTCGTTTT	1e-1	-3.974e+00	0.3103	11.0	0.06%	10.1	0.02%
ANAC050(NAC)/colamp-ANAC050-DAP-Seq(GSE60143)/Homer	WNCTTGNNNNNCAAG	1e-1	-3.963e+00	0.3103	600.0	3.00%	1348.6	2.71%
MYB116(MYB)/colamp-MYB116-DAP-Seq(GSE60143)/Homer	AGTTAGGCAN	1e-1	-3.947e+00	0.3103	968.0	4.84%	2226.6	4.47%
AGL15(MADS)/col-AGL15-DAP-Seq(GSE60143)/Homer	TTTCCHWATWDGGAA	1e-1	-3.901e+00	0.3159	206.0	1.03%	429.7	0.86%
CUC3(NAC)/col-CUC3-DAP-Seq(GSE60143)/Homer	TRCKTGWNNNACAMG	1e-1	-3.900e+00	0.3159	324.0	1.62%	701.1	1.41%
At3g11280(MYBrelated)/col-At3g11280-DAP-Seq(GSE60143)/Homer	GATAAGRT	1e-1	-3.826e+00	0.3295	1919.0	9.59%	4529.0	9.10%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e-1	-3.814e+00	0.3295	2428.0	12.14%	5769.6	11.59%
ERF5(AP2EREBP)/colamp-ERF5-DAP-Seq(GSE60143)/Homer	DCMGCCGCCA	1e-1	-3.813e+00	0.3295	428.0	2.14%	946.0	1.90%
Unknown4/Arabidopsis-Promoters/Homer	CKTCKTCTTY	1e-1	-3.763e+00	0.3344	1237.0	6.19%	2880.3	5.79%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e-1	-3.749e+00	0.3344	3455.0	17.27%	8285.7	16.65%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e-1	-3.728e+00	0.3360	2136.0	10.68%	5062.8	10.17%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e-1	-3.723e+00	0.3360	719.0	3.60%	1638.1	3.29%
At5g08520(MYBrelated)/colamp-At5g08520-DAP-Seq(GSE60143)/Homer	ADBSTTATCY	1e-1	-3.665e+00	0.3470	2110.0	10.55%	5002.2	10.05%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e-1	-3.633e+00	0.3533	3396.0	16.98%	8148.8	16.37%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e-1	-3.609e+00	0.3566	1574.0	7.87%	3702.8	7.44%
TBP3(MYBrelated)/col-TBP3-DAP-Seq(GSE60143)/Homer	VYTAGGGCAN	1e-1	-3.594e+00	0.3570	1128.0	5.64%	2624.2	5.27%
VND3(NAC)/colamp-VND3-DAP-Seq(GSE60143)/Homer	TRCTTGWDNHWCAAG	1e-1	-3.580e+00	0.3570	751.0	3.75%	1719.6	3.46%
MYB63(MYB)/col-MYB63-DAP-Seq(GSE60143)/Homer	BHYACCWACCHH	1e-1	-3.565e+00	0.3574	607.0	3.03%	1376.5	2.77%
AGL63(MADS)/col-AGL63-DAP-Seq(GSE60143)/Homer	TTCCAAWWWTGG	1e-1	-3.548e+00	0.3586	1065.0	5.33%	2475.0	4.97%
CAMTA1(CAMTA)/col-CAMTA1-DAP-Seq(GSE60143)/Homer	WWAACGCGTT	1e-1	-3.544e+00	0.3586	361.0	1.80%	795.9	1.60%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e-1	-3.523e+00	0.3586	1449.0	7.25%	3403.6	6.84%
At5g62940(C2C2dof)/col-At5g62940-DAP-Seq(GSE60143)/Homer	WHWHHACTTTTT	1e-1	-3.517e+00	0.3586	5702.0	28.51%	13833.1	27.80%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e-1	-3.510e+00	0.3586	547.0	2.73%	1235.1	2.48%
AT2G38300(G2like)/col-AT2G38300-DAP-Seq(GSE60143)/Homer	ADRGAATGTT	1e-1	-3.493e+00	0.3586	2173.0	10.87%	5165.8	10.38%
SeqBias: CG-repeat	CGCGCGCGCG	1e-1	-3.468e+00	0.3595	1747.0	8.73%	4130.0	8.30%
ANAC057(NAC)/colamp-ANAC057-DAP-Seq(GSE60143)/Homer	DVCKTGNNNNNCAMG	1e-1	-3.460e+00	0.3595	789.0	3.94%	1814.5	3.65%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e-1	-3.455e+00	0.3595	1838.0	9.19%	4351.2	8.74%
CRF4(AP2EREBP)/colamp-CRF4-DAP-Seq(GSE60143)/Homer	CGCCGCCA	1e-1	-3.453e+00	0.3595	540.0	2.70%	1220.9	2.45%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e-1	-3.431e+00	0.3595	72.0	0.36%	135.8	0.27%
VND4(NAC)/colamp-VND4-DAP-Seq(GSE60143)/Homer	WRCTTGWANWWCAAG	1e-1	-3.396e+00	0.3636	748.0	3.74%	1718.6	3.45%
ANAC020(NAC)/col-ANAC020-DAP-Seq(GSE60143)/Homer	DVCKTGHNNNDCAAG	1e-1	-3.350e+00	0.3760	642.0	3.21%	1466.2	2.95%
GATA11(C2C2gata)/col-GATA11-DAP-Seq(GSE60143)/Homer	DDHYYAGATCTR	1e-1	-3.339e+00	0.3760	494.0	2.47%	1114.1	2.24%
AT5G02460(C2C2dof)/col-AT5G02460-DAP-Seq(GSE60143)/Homer	CHCCTTTT	1e-1	-3.331e+00	0.3760	3590.0	17.95%	8645.3	17.37%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e-1	-3.320e+00	0.3760	551.0	2.76%	1250.9	2.51%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e-1	-3.292e+00	0.3808	1158.0	5.79%	2710.0	5.45%
AT1G72740(MYBrelated)/colamp-AT1G72740-DAP-Seq(GSE60143)/Homer	NNWWAMCCTAAHWNN	1e-1	-3.284e+00	0.3808	1359.0	6.79%	3196.3	6.42%
SND3(NAC)/col-SND3-DAP-Seq(GSE60143)/Homer	CTTNHNNNDNAAGNH	1e-1	-3.272e+00	0.3808	780.0	3.90%	1799.3	3.62%
CUC2(NAC)/colamp-CUC2-DAP-Seq(GSE60143)/Homer	TRCKTGTNNNWCAMG	1e-1	-3.235e+00	0.3903	306.0	1.53%	673.3	1.35%
At3g24120(G2like)/col-At3g24120-DAP-Seq(GSE60143)/Homer	NWWAGMATMW	1e-1	-3.233e+00	0.3903	4908.0	24.54%	11897.0	23.91%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e-1	-3.223e+00	0.3903	208.0	1.04%	445.7	0.90%
RAP26(AP2EREBP)/colamp-RAP26-DAP-Seq(GSE60143)/Homer	HDATGGCGGCGG	1e-1	-3.222e+00	0.3903	1110.0	5.55%	2596.9	5.22%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e-1	-3.073e+00	0.4398	573.0	2.86%	1310.5	2.63%
VND2(NAC)/col-VND2-DAP-Seq(GSE60143)/Homer	DNCKTNNNNNNNAAG	1e-1	-3.071e+00	0.4398	1013.0	5.07%	2368.4	4.76%
VND1(NAC)/col-VND1-DAP-Seq(GSE60143)/Homer	CTTRWDNHWYAAGYW	1e-1	-3.038e+00	0.4463	867.0	4.33%	2017.6	4.05%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e-1	-3.037e+00	0.4463	616.0	3.08%	1414.3	2.84%
ANAC096(NAC)/colamp-ANAC096-DAP-Seq(GSE60143)/Homer	TACTTGWNNNWCAAG	1e-1	-3.036e+00	0.4463	709.0	3.55%	1637.5	3.29%
ERF104(AP2EREBP)/col-ERF104-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e-1	-3.008e+00	0.4464	1009.0	5.04%	2361.6	4.75%
NST1(NAC)/colamp-NST1-DAP-Seq(GSE60143)/Homer	WRCTTRWWNWWYAAG	1e-1	-2.990e+00	0.4500	976.0	4.88%	2282.2	4.59%
ANAC083(NAC)/col-ANAC083-DAP-Seq(GSE60143)/Homer	CKTRWNNNWYAMGTA	1e-1	-2.967e+00	0.4562	745.0	3.72%	1726.7	3.47%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e-1	-2.966e+00	0.4562	242.0	1.21%	529.9	1.06%
AT2G31460(REMB3)/col-AT2G31460-DAP-Seq(GSE60143)/Homer	WNWARWDGAAATGAT	1e-1	-2.961e+00	0.4562	502.0	2.51%	1144.3	2.30%
ANAC004(NAC)/colamp-ANAC004-DAP-Seq(GSE60143)/Homer	WNCTTVYNNNRBAAG	1e-1	-2.943e+00	0.4562	435.0	2.17%	985.2	1.98%
MYB62(MYB)/colamp-MYB62-DAP-Seq(GSE60143)/Homer	NTACCTAACT	1e-1	-2.939e+00	0.4562	1776.0	8.88%	4228.4	8.50%
ANAC075(NAC)/col-ANAC075-DAP-Seq(GSE60143)/Homer	CTTSWWNWWSAAGYT	1e-1	-2.937e+00	0.4562	362.0	1.81%	812.6	1.63%
ANAC016(NAC)/col-ANAC016-DAP-Seq(GSE60143)/Homer	WNCTTGNNNNNCAMG	1e-1	-2.855e+00	0.4823	871.0	4.35%	2034.5	4.09%
MYB4(MYB)/col200-MYB4-DAP-Seq(GSE60143)/Homer	WAGKTAGGTARR	1e-1	-2.819e+00	0.4954	751.0	3.75%	1746.7	3.51%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e-1	-2.785e+00	0.5081	684.0	3.42%	1586.1	3.19%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e-1	-2.763e+00	0.5149	1771.0	8.86%	4226.5	8.49%
ERF4(AP2EREBP)/colamp-ERF4-DAP-Seq(GSE60143)/Homer	WDWTGGCGGCGG	1e-1	-2.740e+00	0.5222	936.0	4.68%	2196.8	4.41%
HAT2(Homeobox)/colamp-HAT2-DAP-Seq(GSE60143)/Homer	CYAATSATTR	1e-1	-2.724e+00	0.5260	1123.0	5.62%	2650.7	5.33%
AT1G19040(NAC)/col-AT1G19040-DAP-Seq(GSE60143)/Homer	CTTGNDNHNCAAGYW	1e-1	-2.705e+00	0.5317	109.0	0.55%	226.7	0.46%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e-1	-2.702e+00	0.5317	181.0	0.91%	392.8	0.79%
At5g05790(MYBrelated)/col-At5g05790-DAP-Seq(GSE60143)/Homer	AYCTTATC	1e-1	-2.695e+00	0.5317	1998.0	9.99%	4785.9	9.62%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e-1	-2.688e+00	0.5317	2238.0	11.19%	5373.4	10.80%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-1	-2.687e+00	0.5317	3057.0	15.29%	7383.6	14.84%
MYB94(MYB)/col-MYB94-DAP-Seq(GSE60143)/Homer	WGGTRGTTGGKA	1e-1	-2.686e+00	0.5317	586.0	2.93%	1354.6	2.72%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-1	-2.686e+00	0.5317	2561.0	12.80%	6165.6	12.39%
BOS1(MYB)/col-BOS1-DAP-Seq(GSE60143)/Homer	NNRCCTAACT	1e-1	-2.666e+00	0.5317	1272.0	6.36%	3015.4	6.06%
Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer	KBCTACCTGW	1e-1	-2.657e+00	0.5317	546.0	2.73%	1259.2	2.53%
SRS7(SRS)/colamp-SRS7-DAP-Seq(GSE60143)/Homer	HATAGGTTTH	1e-1	-2.655e+00	0.5317	4726.0	23.63%	11498.1	23.10%
CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer	AAATTSAATTTN	1e-1	-2.635e+00	0.5317	579.0	2.90%	1339.8	2.69%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e-1	-2.624e+00	0.5317	321.0	1.60%	723.1	1.45%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e-1	-2.605e+00	0.5325	786.0	3.93%	1839.2	3.70%
WRKY7(WRKY)/colamp-WRKY7-DAP-Seq(GSE60143)/Homer	AAAAGTCAACGSHWD	1e-1	-2.604e+00	0.5325	3.0	0.01%	1.6	0.00%
At2g03500(G2like)/col-At2g03500-DAP-Seq(GSE60143)/Homer	WWAGAATATTCT	1e-1	-2.574e+00	0.5405	263.0	1.31%	587.4	1.18%
At5g29000(G2like)/col-At5g29000-DAP-Seq(GSE60143)/Homer	RGAATATTCYHH	1e-1	-2.573e+00	0.5405	304.0	1.52%	684.5	1.38%
ANAC070(NAC)/colamp-ANAC070-DAP-Seq(GSE60143)/Homer	CTTRHDNHNBAAGHW	1e-1	-2.571e+00	0.5405	1286.0	6.43%	3054.2	6.14%
Tal1	CATCTG	1e-1	-2.571e+00	0.5405	2589.0	12.95%	6243.0	12.54%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e-1	-2.555e+00	0.5405	270.0	1.35%	604.8	1.22%
TSO1(CPP)/col-TSO1-DAP-Seq(GSE60143)/Homer	RAATTTRAAW	1e-1	-2.548e+00	0.5405	166.0	0.83%	360.1	0.72%
MYB41(MYB)/col-MYB41-DAP-Seq(GSE60143)/Homer	BYTYACCTAA	1e-1	-2.542e+00	0.5405	481.0	2.40%	1107.4	2.23%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e-1	-2.510e+00	0.5469	313.0	1.57%	707.9	1.42%
ERF1(AP2EREBP)/colamp-ERF1-DAP-Seq(GSE60143)/Homer	GGCGGCTR	1e-1	-2.498e+00	0.5497	616.0	3.08%	1433.6	2.88%
At2g01060(G2like)/colamp-At2g01060-DAP-Seq(GSE60143)/Homer	AGATKCBNWW	1e-1	-2.490e+00	0.5497	4572.0	22.86%	11133.6	22.37%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e-1	-2.490e+00	0.5497	1897.0	9.49%	4551.4	9.15%
AT3G10580(MYBrelated)/colamp-AT3G10580-DAP-Seq(GSE60143)/Homer	TACCTAACWNHW	1e-1	-2.475e+00	0.5502	488.0	2.44%	1126.9	2.26%
ERF115(AP2EREBP)/colamp-ERF115-DAP-Seq(GSE60143)/Homer	WTKRCGGCGB	1e-1	-2.468e+00	0.5503	1485.0	7.42%	3545.8	7.13%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e-1	-2.450e+00	0.5564	2532.0	12.66%	6111.5	12.28%
SND2(NAC)/colamp-SND2-DAP-Seq(GSE60143)/Homer	CTTVWNNNWBAAGNW	1e-1	-2.448e+00	0.5564	565.0	2.83%	1312.4	2.64%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e-1	-2.434e+00	0.5574	1476.0	7.38%	3525.3	7.08%
REB1/SacCer-Promoters/Homer	KCCGGGTAAYRR	1e-1	-2.429e+00	0.5574	206.0	1.03%	456.0	0.92%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e-1	-2.401e+00	0.5687	590.0	2.95%	1374.4	2.76%
CRF10(AP2EREBP)/col100-CRF10-DAP-Seq(GSE60143)/Homer	DCCGCCGYHA	1e-1	-2.383e+00	0.5748	1093.0	5.46%	2594.4	5.21%
MYB57(MYB)/col-MYB57-DAP-Seq(GSE60143)/Homer	TTACCTAACT	1e-1	-2.370e+00	0.5782	626.0	3.13%	1462.9	2.94%
ATY13(MYB)/col-ATY13-DAP-Seq(GSE60143)/Homer	YYYAACYRHH	1e-1	-2.365e+00	0.5782	4971.0	24.86%	12131.3	24.38%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e-1	-2.362e+00	0.5782	7140.0	35.70%	17502.4	35.17%
AT2G33550(Trihelix)/colamp-AT2G33550-DAP-Seq(GSE60143)/Homer	TTTAAGGGCAYTTTT	1e-1	-2.346e+00	0.5805	2920.0	14.60%	7073.3	14.21%
TCP20(TCP)/col-TCP20-DAP-Seq(GSE60143)/Homer	GGDCCCAC	1e-1	-2.325e+00	0.5891	527.0	2.63%	1225.8	2.46%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-2.301e+00	0.5997	1971.0	9.86%	4745.5	9.54%
MYB33(MYB)/col-MYB33-DAP-Seq(GSE60143)/Homer	DDTYNGTTAN	1e0	-2.283e+00	0.6066	2785.0	13.93%	6746.7	13.56%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-2.279e+00	0.6066	454.0	2.27%	1051.9	2.11%
AT3G51470(DBP)/col-AT3G51470-DAP-Seq(GSE60143)/Homer	TTWHGGTGCACC	1e0	-2.238e+00	0.6264	1833.0	9.16%	4411.2	8.86%
GATA12(C2C2gata)/col-GATA12-DAP-Seq(GSE60143)/Homer	YAGATCTRAW	1e0	-2.225e+00	0.6304	636.0	3.18%	1492.4	3.00%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-2.198e+00	0.6438	4454.0	22.27%	10870.1	21.84%
ERF11(AP2EREBP)/col-ERF11-DAP-Seq(GSE60143)/Homer	RTGGCGGCGG	1e0	-2.196e+00	0.6438	770.0	3.85%	1818.4	3.65%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-2.177e+00	0.6493	3462.0	17.31%	8423.0	16.93%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-2.159e+00	0.6570	334.0	1.67%	767.4	1.54%
At1g69690(TCP)/colamp-At1g69690-DAP-Seq(GSE60143)/Homer	NHGTGGGGCCCACHW	1e0	-2.146e+00	0.6615	333.0	1.67%	765.8	1.54%
ANAC013(NAC)/col-ANAC013-DAP-Seq(GSE60143)/Homer	CTTGNNNNNCAAGNA	1e0	-2.139e+00	0.6623	442.0	2.21%	1027.5	2.06%
bHLH122(bHLH)/col100-bHLH122-DAP-Seq(GSE60143)/Homer	NDDCAASTTGHHNWW	1e0	-2.112e+00	0.6761	1110.0	5.55%	2650.5	5.33%
MYB77(MYB)/col-MYB77-DAP-Seq(GSE60143)/Homer	NYAACBGYMC	1e0	-2.084e+00	0.6909	1961.0	9.80%	4736.5	9.52%
Unknown5/Drosophila-Promoters/Homer	GCTGATAASV	1e0	-2.051e+00	0.7101	1075.0	5.38%	2568.4	5.16%
caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer	GGYCATAAAW	1e0	-2.042e+00	0.7119	999.0	5.00%	2383.9	4.79%
ANAC103(NAC)/col-ANAC103-DAP-Seq(GSE60143)/Homer	AACTTGNWNWNCAAG	1e0	-2.022e+00	0.7225	378.0	1.89%	877.9	1.76%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-2.011e+00	0.7257	409.0	2.04%	952.3	1.91%
AT1G47655(C2C2dof)/colamp-AT1G47655-DAP-Seq(GSE60143)/Homer	YHACTTTTTS	1e0	-2.009e+00	0.7257	5785.0	28.93%	14184.6	28.50%
MYB56(MYB)/colamp-MYB56-DAP-Seq(GSE60143)/Homer	HTAACGRMHY	1e0	-2.007e+00	0.7257	1083.0	5.42%	2591.0	5.21%
ERF9(AP2EREBP)/colamp-ERF9-DAP-Seq(GSE60143)/Homer	AWATGGCGGCGG	1e0	-2.002e+00	0.7257	174.0	0.87%	390.7	0.79%
ANAC087(NAC)/col-ANAC087-DAP-Seq(GSE60143)/Homer	WVCKTGHNNNWCAMG	1e0	-1.997e+00	0.7257	276.0	1.38%	633.6	1.27%
NUC(C2H2)/col-NUC-DAP-Seq(GSE60143)/Homer	HAVAAAACGACAAAA	1e0	-1.992e+00	0.7257	114.0	0.57%	249.4	0.50%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-1.988e+00	0.7257	1717.0	8.58%	4144.9	8.33%
AT2G28810(C2C2dof)/colamp-AT2G28810-DAP-Seq(GSE60143)/Homer	VAAAAAGTWA	1e0	-1.979e+00	0.7257	3848.0	19.24%	9395.2	18.88%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-1.976e+00	0.7257	943.0	4.71%	2250.5	4.52%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-1.961e+00	0.7257	1252.0	6.26%	3006.2	6.04%
AT5G61620(MYBrelated)/colamp-AT5G61620-DAP-Seq(GSE60143)/Homer	CTTATCCA	1e0	-1.960e+00	0.7257	2278.0	11.39%	5525.1	11.10%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-1.956e+00	0.7257	3624.0	18.12%	8845.0	17.77%
AT2G20400(G2like)/colamp-AT2G20400-DAP-Seq(GSE60143)/Homer	DNVGAATATTCBNHN	1e0	-1.943e+00	0.7262	140.0	0.70%	311.9	0.63%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-1.942e+00	0.7262	432.0	2.16%	1010.8	2.03%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-1.920e+00	0.7345	804.0	4.02%	1914.3	3.85%
WRKY46(WRKY)/colamp-WRKY46-DAP-Seq(GSE60143)/Homer	AAAGTCAACGSN	1e0	-1.912e+00	0.7364	73.0	0.36%	155.6	0.31%
ERF2(AP2EREBP)/colamp-ERF2-DAP-Seq(GSE60143)/Homer	GGCGGCTG	1e0	-1.899e+00	0.7422	682.0	3.41%	1619.0	3.25%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-1.884e+00	0.7490	909.0	4.54%	2172.5	4.37%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-1.878e+00	0.7497	831.0	4.15%	1982.5	3.98%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-1.867e+00	0.7543	1116.0	5.58%	2679.7	5.38%
SOC1(MADS)/Seedling-SOC1-ChIP-Seq(GSE45846)/Homer	TWCCAWWTWTGG	1e0	-1.853e+00	0.7605	474.0	2.37%	1115.1	2.24%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.825e+00	0.7782	770.0	3.85%	1836.7	3.69%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-1.825e+00	0.7782	233.0	1.17%	535.4	1.08%
ARF2(ARF)/col-ARF2-DAP-Seq(GSE60143)/Homer	TTGTCGGMWN	1e0	-1.818e+00	0.7782	4267.0	21.34%	10448.1	21.00%
At1g68670(G2like)/colamp-At1g68670-DAP-Seq(GSE60143)/Homer	WNWWHNRAAGATTCT	1e0	-1.805e+00	0.7814	577.0	2.89%	1367.3	2.75%
ATHB24(ZFHD)/colamp-ATHB24-DAP-Seq(GSE60143)/Homer	TAATTAAS	1e0	-1.787e+00	0.7916	1018.0	5.09%	2444.0	4.91%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.771e+00	0.8006	364.0	1.82%	852.5	1.71%
VIP1(bZIP)/col-VIP1-DAP-Seq(GSE60143)/Homer	NTTGACAGCTGTCAN	1e0	-1.763e+00	0.8030	315.0	1.57%	734.2	1.48%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-1.760e+00	0.8030	3158.0	15.79%	7713.5	15.50%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-1.753e+00	0.8030	3488.0	17.44%	8529.4	17.14%
ERF105(AP2EREBP)/colamp-ERF105-DAP-Seq(GSE60143)/Homer	TGGCGGCT	1e0	-1.744e+00	0.8059	1579.0	7.90%	3823.7	7.68%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-1.742e+00	0.8059	461.0	2.31%	1088.2	2.19%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-1.734e+00	0.8059	239.0	1.20%	552.8	1.11%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-1.732e+00	0.8059	196.0	0.98%	449.2	0.90%
HSFA6B(HSF)/colamp-HSFA6B-DAP-Seq(GSE60143)/Homer	NTTCTAGAANHTTCT	1e0	-1.709e+00	0.8182	553.0	2.77%	1313.2	2.64%
SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer	CCAAAAAGGG	1e0	-1.695e+00	0.8254	1682.0	8.41%	4080.6	8.20%
TATA-box/SacCer-Promoters/Homer	BBHWTATATA	1e0	-1.691e+00	0.8254	449.0	2.25%	1062.0	2.13%
ANAC042(NAC)/col-ANAC042-DAP-Seq(GSE60143)/Homer	CGTNDHNDHNACGKY	1e0	-1.689e+00	0.8254	364.0	1.82%	855.8	1.72%
bHLH18(bHLH)/col-bHLH18-DAP-Seq(GSE60143)/Homer	CACGTGTTYCACGTG	1e0	-1.688e+00	0.8254	18.0	0.09%	33.3	0.07%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-1.685e+00	0.8254	1243.0	6.21%	3002.7	6.03%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-1.681e+00	0.8254	2834.0	14.17%	6922.0	13.91%
dof45(C2C2dof)/col-dof45-DAP-Seq(GSE60143)/Homer	NVAWAAAGTN	1e0	-1.674e+00	0.8254	4032.0	20.16%	9883.4	19.86%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.673e+00	0.8254	169.0	0.84%	386.2	0.78%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	-1.667e+00	0.8254	7.0	0.03%	10.5	0.02%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	-1.664e+00	0.8254	17.0	0.08%	31.1	0.06%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-1.631e+00	0.8392	1484.0	7.42%	3598.4	7.23%
AtHB32(ZFHD)/col200-AtHB32-DAP-Seq(GSE60143)/Homer	CGAATTAT	1e0	-1.628e+00	0.8392	1527.0	7.63%	3704.8	7.44%
SVP(MADS)/col-SVP-DAP-Seq(GSE60143)/Homer	ANTTWCCHAATTTGG	1e0	-1.616e+00	0.8446	650.0	3.25%	1554.2	3.12%
ASL18(LOBAS2)/colamp-ASL18-DAP-Seq(GSE60143)/Homer	CCGGAAAWTCMGGAR	1e0	-1.612e+00	0.8446	2414.0	12.07%	5891.6	11.84%
bHLH80(bHLH)/col-bHLH80-DAP-Seq(GSE60143)/Homer	NNNNDCAASTTGHNN	1e0	-1.606e+00	0.8447	1301.0	6.50%	3150.4	6.33%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-1.595e+00	0.8503	1380.0	6.90%	3345.3	6.72%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-1.590e+00	0.8507	61.0	0.30%	132.9	0.27%
MYB113(MYB)/col-MYB113-DAP-Seq(GSE60143)/Homer	HNDAWTCMGTTAYWN	1e0	-1.577e+00	0.8582	668.0	3.34%	1600.7	3.22%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-1.565e+00	0.8647	177.0	0.89%	408.7	0.82%
LBD13(LOBAS2)/colamp-LBD13-DAP-Seq(GSE60143)/Homer	KCCGTNWTTTBCGGC	1e0	-1.560e+00	0.8651	778.0	3.89%	1870.3	3.76%
MYB105(MYB)/colamp-MYB105-DAP-Seq(GSE60143)/Homer	RATWCCGTTA	1e0	-1.556e+00	0.8651	753.0	3.77%	1809.9	3.64%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-1.551e+00	0.8653	186.0	0.93%	430.7	0.87%
At3g45610(C2C2dof)/col-At3g45610-DAP-Seq(GSE60143)/Homer	TWACTTTTTS	1e0	-1.547e+00	0.8653	2426.0	12.13%	5927.4	11.91%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-1.537e+00	0.8691	864.0	4.32%	2082.5	4.18%
HuR(?)/HEK293-HuR-CLIP-Seq(GSE87887)/Homer	BTTTGGTTTG	1e0	-1.528e+00	0.8740	5868.0	29.34%	14451.9	29.04%
At1g25550(G2like)/colamp-At1g25550-DAP-Seq(GSE60143)/Homer	NAGATTCY	1e0	-1.528e+00	0.8740	1592.0	7.96%	3872.0	7.78%
ATHB15(HB)/col-ATHB15-DAP-Seq(GSE60143)/Homer	GYAATSATTA	1e0	-1.508e+00	0.8831	350.0	1.75%	828.4	1.66%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-1.504e+00	0.8836	576.0	2.88%	1379.7	2.77%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-1.498e+00	0.8846	2339.0	11.70%	5717.6	11.49%
MYB10(MYB)/col-MYB10-DAP-Seq(GSE60143)/Homer	YCCACCTACCHH	1e0	-1.483e+00	0.8938	490.0	2.45%	1170.1	2.35%
MYB51(MYB)/col-MYB51-DAP-Seq(GSE60143)/Homer	GGTAGGTG	1e0	-1.480e+00	0.8938	1078.0	5.39%	2611.1	5.25%
PUCHI(AP2EREBP)/colamp-PUCHI-DAP-Seq(GSE60143)/Homer	GCGCCGTY	1e0	-1.480e+00	0.8938	589.0	2.94%	1412.4	2.84%
AT2G40260(G2like)/colamp-AT2G40260-DAP-Seq(GSE60143)/Homer	WAAAYATTCTTT	1e0	-1.480e+00	0.8938	2484.0	12.42%	6077.5	12.21%
At1g49010(MYBrelated)/col-At1g49010-DAP-Seq(GSE60143)/Homer	RGATAASNTT	1e0	-1.479e+00	0.8938	3398.0	16.99%	8337.2	16.75%
AT1G24250(Orphan)/col-AT1G24250-DAP-Seq(GSE60143)/Homer	KTDGTTGGTDGTTGG	1e0	-1.475e+00	0.8938	377.0	1.88%	895.2	1.80%
SPL15(SBP)/colamp-SPL15-DAP-Seq(GSE60143)/Homer	WDWMMGTACADW	1e0	-1.474e+00	0.8938	1606.0	8.03%	3911.8	7.86%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-1.465e+00	0.8938	1697.0	8.48%	4136.3	8.31%
MYB3R5(MYB)/col-MYB3R5-DAP-Seq(GSE60143)/Homer	THYAACGGTHAWAWT	1e0	-1.450e+00	0.8940	66.0	0.33%	146.6	0.29%
PLT3(AP2EREBP)/col-PLT3-DAP-Seq(GSE60143)/Homer	GCACGNWTHYCGAGG	1e0	-1.442e+00	0.8971	60.0	0.30%	132.0	0.27%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-1.438e+00	0.8972	804.0	4.02%	1941.3	3.90%
MYB44(MYB)/colamp-MYB44-DAP-Seq(GSE60143)/Homer	CVGTTWWKTCNGTTA	1e0	-1.436e+00	0.8972	95.0	0.47%	215.2	0.43%
AT4G18450(AP2EREBP)/col-AT4G18450-DAP-Seq(GSE60143)/Homer	ATGGCGGCKG	1e0	-1.434e+00	0.8972	373.0	1.86%	887.5	1.78%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-1.431e+00	0.8972	375.0	1.88%	892.0	1.79%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-1.428e+00	0.8972	732.0	3.66%	1765.9	3.55%
ATHB6(Homeobox)/col-ATHB6-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-1.426e+00	0.8972	1608.0	8.04%	3920.8	7.88%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	-1.425e+00	0.8972	4.0	0.02%	5.7	0.01%
MYB121(MYB)/col-MYB121-DAP-Seq(GSE60143)/Homer	YNTACCTAACWW	1e0	-1.415e+00	0.8972	378.0	1.89%	900.8	1.81%
ERF73(AP2EREBP)/col-ERF73-DAP-Seq(GSE60143)/Homer	CCGCCGCC	1e0	-1.406e+00	0.8972	656.0	3.28%	1580.0	3.18%
GTL1(Trihelix)/colamp-GTL1-DAP-Seq(GSE60143)/Homer	WWTTTACCKY	1e0	-1.406e+00	0.8972	1486.0	7.43%	3621.7	7.28%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-1.405e+00	0.8972	129.0	0.65%	297.9	0.60%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-1.400e+00	0.8972	1237.0	6.19%	3008.9	6.05%
ERF7(AP2EREBP)/col-ERF7-DAP-Seq(GSE60143)/Homer	ATGRCGGCGG	1e0	-1.369e+00	0.9158	1262.0	6.31%	3072.9	6.17%
dof24(C2C2dof)/col-dof24-DAP-Seq(GSE60143)/Homer	TWMCTTTTTG	1e0	-1.366e+00	0.9158	3214.0	16.07%	7895.3	15.87%
BBX31(Orphan)/col-BBX31-DAP-Seq(GSE60143)/Homer	NAAAAAGTDA	1e0	-1.366e+00	0.9158	2446.0	12.23%	5995.8	12.05%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.364e+00	0.9158	192.0	0.96%	450.2	0.90%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-1.361e+00	0.9158	1675.0	8.38%	4091.4	8.22%
SeqBias: A/T bias	WWWWWWWWWW	1e0	-1.360e+00	0.9158	15594.0	77.97%	38686.4	77.74%
TCP17(TCP)/col-TCP17-DAP-Seq(GSE60143)/Homer	GTGGTCCCCA	1e0	-1.351e+00	0.9158	64.0	0.32%	143.7	0.29%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-1.349e+00	0.9158	783.0	3.91%	1895.3	3.81%
ANAC045(NAC)/col-ANAC045-DAP-Seq(GSE60143)/Homer	DNCKTVNNNNNNAMG	1e0	-1.348e+00	0.9158	2558.0	12.79%	6274.2	12.61%
PCF/Arabidopsis-Promoters/Homer	NNWWWTGGGCYTDDN	1e0	-1.338e+00	0.9158	272.0	1.36%	645.2	1.30%
BAM8(BES1)/col-BAM8-DAP-Seq(GSE60143)/Homer	NNWSACACGTGTSWN	1e0	-1.334e+00	0.9158	149.0	0.74%	348.0	0.70%
EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer	TGCAARYGCGCTCYA	1e0	-1.332e+00	0.9158	22.0	0.11%	45.4	0.09%
MYB101(MYB)/colamp-MYB101-DAP-Seq(GSE60143)/Homer	TAACNRMY	1e0	-1.325e+00	0.9158	3258.0	16.29%	8009.8	16.10%
AT1G28160(AP2EREBP)/colamp-AT1G28160-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	-1.324e+00	0.9158	1902.0	9.51%	4655.4	9.35%
At4g18890(BZR)/col-At4g18890-DAP-Seq(GSE60143)/Homer	NDBRCACGTGYR	1e0	-1.315e+00	0.9165	186.0	0.93%	437.8	0.88%
ERF8(AP2EREBP)/colamp-ERF8-DAP-Seq(GSE60143)/Homer	CGCCGYCATW	1e0	-1.315e+00	0.9165	922.0	4.61%	2239.8	4.50%
FAR1(FAR1)/col-FAR1-DAP-Seq(GSE60143)/Homer	TKNNNYYCACGCGCY	1e0	-1.313e+00	0.9165	78.0	0.39%	177.1	0.36%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-1.294e+00	0.9259	1832.0	9.16%	4485.8	9.01%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-1.293e+00	0.9259	2025.0	10.12%	4962.0	9.97%
ANAC094(NAC)/col-ANAC094-DAP-Seq(GSE60143)/Homer	DVCGTRNNNNNYACG	1e0	-1.284e+00	0.9286	186.0	0.93%	438.6	0.88%
At2g33710(AP2EREBP)/colamp-At2g33710-DAP-Seq(GSE60143)/Homer	WTKGCGGCKR	1e0	-1.283e+00	0.9286	1921.0	9.61%	4706.8	9.46%
ABR1(AP2EREBP)/colamp-ABR1-DAP-Seq(GSE60143)/Homer	AAATGGCGGCGG	1e0	-1.281e+00	0.9286	843.0	4.21%	2047.2	4.11%
MGP(C2H2)/colamp-MGP-DAP-Seq(GSE60143)/Homer	TTTTGTCGTTTW	1e0	-1.278e+00	0.9286	285.0	1.43%	679.9	1.37%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-1.263e+00	0.9342	2344.0	11.72%	5754.3	11.56%
JKD(C2H2)/col-JKD-DAP-Seq(GSE60143)/Homer	TTTTGTCGTTTT	1e0	-1.260e+00	0.9342	233.0	1.17%	554.0	1.11%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-1.258e+00	0.9342	1731.0	8.65%	4239.1	8.52%
PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer	ACTGATAAGA	1e0	-1.256e+00	0.9342	902.0	4.51%	2194.9	4.41%
REM16(ABI3VP1)/col-REM16-DAP-Seq(GSE60143)/Homer	DTTTTTSCCGSMAAA	1e0	-1.249e+00	0.9342	1.0	0.01%	0.0	0.00%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.246e+00	0.9342	1650.0	8.25%	4040.6	8.12%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-1.242e+00	0.9342	514.0	2.57%	1241.0	2.49%
AGL95(ND)/col-AGL95-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	-1.231e+00	0.9409	106.0	0.53%	246.6	0.50%
GATA14(C2C2gata)/col-GATA14-DAP-Seq(GSE60143)/Homer	AYCAGATCTG	1e0	-1.227e+00	0.9419	759.0	3.79%	1844.5	3.71%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.226e+00	0.9419	962.0	4.81%	2345.0	4.71%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-1.225e+00	0.9419	305.0	1.52%	730.8	1.47%
MYB119(MYB)/colamp-MYB119-DAP-Seq(GSE60143)/Homer	YRACCGTTACDD	1e0	-1.223e+00	0.9419	343.0	1.71%	823.3	1.65%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.214e+00	0.9419	389.0	1.94%	936.6	1.88%
RAP212(AP2EREBP)/col-RAP212-DAP-Seq(GSE60143)/Homer	CGCCGCCATTTT	1e0	-1.214e+00	0.9419	596.0	2.98%	1444.1	2.90%
MYB3R1(MYB)/col-MYB3R1-DAP-Seq(GSE60143)/Homer	WWDTDACCGTTR	1e0	-1.212e+00	0.9419	288.0	1.44%	689.3	1.39%
EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer	ATTTAATGGG	1e0	-1.211e+00	0.9419	1863.0	9.31%	4570.8	9.18%
ERF3(AP2EREBP)/colamp-ERF3-DAP-Seq(GSE60143)/Homer	ATGGCGGCGG	1e0	-1.209e+00	0.9419	556.0	2.78%	1346.3	2.71%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-1.203e+00	0.9419	1658.0	8.29%	4064.1	8.17%
SHN3(AP2EREBP)/col-SHN3-DAP-Seq(GSE60143)/Homer	CCGCCGCC	1e0	-1.199e+00	0.9419	298.0	1.49%	714.4	1.44%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.196e+00	0.9419	1389.0	6.94%	3400.4	6.83%
At4g01280(MYBrelated)/colamp-At4g01280-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-1.192e+00	0.9419	615.0	3.08%	1492.2	3.00%
AT3G12130(C3H)/colamp-AT3G12130-DAP-Seq(GSE60143)/Homer	TMACTTTTTV	1e0	-1.189e+00	0.9419	3906.0	19.53%	9633.1	19.36%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-1.172e+00	0.9484	159.0	0.80%	376.8	0.76%
At1g14580(C2H2)/colamp-At1g14580-DAP-Seq(GSE60143)/Homer	CASAAAAMGACAAAA	1e0	-1.160e+00	0.9575	238.0	1.19%	569.5	1.14%
At2g41835(C2H2)/col-At2g41835-DAP-Seq(GSE60143)/Homer	TTTGAAAA	1e0	-1.158e+00	0.9575	684.0	3.42%	1664.3	3.34%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-1.156e+00	0.9575	267.0	1.33%	641.0	1.29%
ESE3(AP2EREBP)/col-ESE3-DAP-Seq(GSE60143)/Homer	GACGGTGG	1e0	-1.154e+00	0.9575	1149.0	5.75%	2811.1	5.65%
MYB55(MYB)/colamp-MYB55-DAP-Seq(GSE60143)/Homer	YACCWAMC	1e0	-1.145e+00	0.9586	1326.0	6.63%	3249.5	6.53%
ERF15(AP2EREBP)/colamp-ERF15-DAP-Seq(GSE60143)/Homer	WDHAGCMGCCAT	1e0	-1.144e+00	0.9586	3115.0	15.57%	7678.1	15.43%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-1.143e+00	0.9586	136.0	0.68%	321.3	0.65%
GATA4(C2C2gata)/col-GATA4-DAP-Seq(GSE60143)/Homer	DDWTYAGATCTR	1e0	-1.140e+00	0.9586	744.0	3.72%	1813.7	3.64%
ATHB21(HB)/colamp-ATHB21-DAP-Seq(GSE60143)/Homer	YCAATWAT	1e0	-1.137e+00	0.9586	575.0	2.88%	1397.1	2.81%
PLT1(AP2EREBP)/colamp-PLT1-DAP-Seq(GSE60143)/Homer	GCACGAWTYCCGAGG	1e0	-1.136e+00	0.9586	81.0	0.40%	189.0	0.38%
AT3G52440(C2C2dof)/colamp-AT3G52440-DAP-Seq(GSE60143)/Homer	DTHACTTTTT	1e0	-1.134e+00	0.9586	3650.0	18.25%	9006.3	18.10%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-1.115e+00	0.9662	272.0	1.36%	654.7	1.32%
TOD6?/SacCer-Promoters/Homer	GCGATGAGMT	1e0	-1.103e+00	0.9746	224.0	1.12%	538.0	1.08%
MYB49(MYB)/col-MYB49-DAP-Seq(GSE60143)/Homer	ARKTAGGTRR	1e0	-1.095e+00	0.9794	1261.0	6.30%	3093.8	6.22%
HLH-1(bHLH)/cElegans-Embryo-HLH1-ChIP-Seq(modEncode)/Homer	RACAGCTGTTBH	1e0	-1.095e+00	0.9794	1316.0	6.58%	3229.6	6.49%
AT3G10030(Trihelix)/colamp-AT3G10030-DAP-Seq(GSE60143)/Homer	GCCGTTAA	1e0	-1.093e+00	0.9794	709.0	3.55%	1730.9	3.48%
MYB83(MYB)/colamp-MYB83-DAP-Seq(GSE60143)/Homer	CACCAACCWH	1e0	-1.089e+00	0.9794	2226.0	11.13%	5482.0	11.02%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-1.088e+00	0.9794	245.0	1.23%	589.5	1.18%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-1.087e+00	0.9794	678.0	3.39%	1654.5	3.32%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-1.085e+00	0.9794	652.0	3.26%	1590.3	3.20%
BZR1(BZR)/col-BZR1-DAP-Seq(GSE60143)/Homer	NNCRCACGTGCG	1e0	-1.083e+00	0.9794	97.0	0.48%	228.5	0.46%
ATY19(MYB)/col-ATY19-DAP-Seq(GSE60143)/Homer	YYCACCWACCAT	1e0	-1.082e+00	0.9794	872.0	4.36%	2133.4	4.29%
ATHB6(Homeobox)/Arabidopsis-HB6-ChIP-Seq(GSE80564)/Homer	CAATNATTBN	1e0	-1.071e+00	0.9794	934.0	4.67%	2288.0	4.60%
LEP(AP2EREBP)/col-LEP-DAP-Seq(GSE60143)/Homer	CDCCGCCGTC	1e0	-1.070e+00	0.9794	250.0	1.25%	602.5	1.21%
MYB61(MYB)/colamp-MYB61-DAP-Seq(GSE60143)/Homer	HCYACCTACC	1e0	-1.068e+00	0.9794	1921.0	9.61%	4729.5	9.50%
MYB70(MYB)/col-MYB70-DAP-Seq(GSE60143)/Homer	WTAACNGTTA	1e0	-1.066e+00	0.9794	2218.0	11.09%	5465.8	10.98%
MYB30(MYB)/colamp-MYB30-DAP-Seq(GSE60143)/Homer	AGGTAGTTGG	1e0	-1.065e+00	0.9794	1540.0	7.70%	3786.9	7.61%
AGL16(MADS)/col-AGL16-DAP-Seq(GSE60143)/Homer	TWCCHWATWDGGAAA	1e0	-1.058e+00	0.9794	114.0	0.57%	270.6	0.54%
Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer	RGAGAGAG	1e0	-1.058e+00	0.9794	4475.0	22.38%	11065.7	22.24%
CCA(Myb)/Arabidopsis-CCA.GFP-ChIP-Seq(GSE70533)/Homer	AGATATYTTT	1e0	-1.055e+00	0.9794	980.0	4.90%	2402.9	4.83%
HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer	TGATGGAW	1e0	-1.054e+00	0.9794	393.0	1.97%	954.4	1.92%
WRKY28(WRKY)/col-WRKY28-DAP-Seq(GSE60143)/Homer	BGTTGACTWH	1e0	-1.051e+00	0.9794	1812.0	9.06%	4461.9	8.97%
AT5G56840(MYBrelated)/colamp-AT5G56840-DAP-Seq(GSE60143)/Homer	TGGATAAGGT	1e0	-1.049e+00	0.9794	2042.0	10.21%	5031.4	10.11%
ZML2(C2C2gata)/col-ZML2-DAP-Seq(GSE60143)/Homer	CATCATCATC	1e0	-1.047e+00	0.9794	219.0	1.09%	527.0	1.06%
MYB65(MYB)/colamp-MYB65-DAP-Seq(GSE60143)/Homer	RACNGTTA	1e0	-1.045e+00	0.9794	1668.0	8.34%	4105.8	8.25%
AT4G37180(G2like)/col-AT4G37180-DAP-Seq(GSE60143)/Homer	AGAATCTTNN	1e0	-1.045e+00	0.9794	1754.0	8.77%	4318.6	8.68%
ATHB53(HB)/col-ATHB53-DAP-Seq(GSE60143)/Homer	CAATAATT	1e0	-1.041e+00	0.9794	521.0	2.60%	1270.3	2.55%
bHLH130(bHLH)/col-bHLH130-DAP-Seq(GSE60143)/Homer	GCAACTTG	1e0	-1.037e+00	0.9794	962.0	4.81%	2359.3	4.74%
ERF13(AP2EREBP)/colamp-ERF13-DAP-Seq(GSE60143)/Homer	TYAGCCGCCATT	1e0	-1.028e+00	0.9794	1157.0	5.79%	2842.1	5.71%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-1.021e+00	0.9794	18.0	0.09%	39.4	0.08%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-1.013e+00	0.9794	735.0	3.67%	1800.2	3.62%
HDG7(HB)/col-HDG7-DAP-Seq(GSE60143)/Homer	WGCATTTAATGC	1e0	-1.008e+00	0.9814	189.0	0.95%	455.5	0.92%
SPL11(SBP)/col100-SPL11-DAP-Seq(GSE60143)/Homer	YTGTACTTBH	1e0	-1.004e+00	0.9825	759.0	3.79%	1860.9	3.74%
AT1G49560(G2like)/colamp-AT1G49560-DAP-Seq(GSE60143)/Homer	GAWTCTNWDA	1e0	-1.001e+00	0.9825	1892.0	9.46%	4665.7	9.38%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-9.937e-01	0.9865	2545.0	12.72%	6285.3	12.63%
IDD7(C2H2)/col-IDD7-DAP-Seq(GSE60143)/Homer	TTTGTCKTTTTN	1e0	-9.922e-01	0.9865	523.0	2.61%	1278.0	2.57%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-9.914e-01	0.9865	35.0	0.18%	80.2	0.16%
dof43(C2C2dof)/colamp-dof43-DAP-Seq(GSE60143)/Homer	NAAAAAGTDA	1e0	-9.891e-01	0.9865	2248.0	11.24%	5549.9	11.15%
At3g04030(G2like)/col-At3g04030-DAP-Seq(GSE60143)/Homer	DRGAATCT	1e0	-9.839e-01	0.9865	1329.0	6.64%	3272.3	6.58%
OBP1(C2C2dof)/col-OBP1-DAP-Seq(GSE60143)/Homer	NHHACTTTWT	1e0	-9.783e-01	0.9876	4491.0	22.45%	11118.9	22.34%
ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer	AWTGATAAGA	1e0	-9.616e-01	1.0000	923.0	4.61%	2269.8	4.56%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-9.372e-01	1.0000	3420.0	17.10%	8465.8	17.01%
ANL2(HB)/col-ANL2-DAP-Seq(GSE60143)/Homer	CATTAATTGC	1e0	-9.352e-01	1.0000	532.0	2.66%	1304.5	2.62%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-9.347e-01	1.0000	1498.0	7.49%	3696.9	7.43%
IDD4(C2H2)/col-IDD4-DAP-Seq(GSE60143)/Homer	TTTGTCTTTWTB	1e0	-9.232e-01	1.0000	1297.0	6.49%	3199.1	6.43%
DAG2(C2C2dof)/col-DAG2-DAP-Seq(GSE60143)/Homer	WWTTHACTTTTT	1e0	-9.166e-01	1.0000	2502.0	12.51%	6189.2	12.44%
TRP2(MYBrelated)/colamp-TRP2-DAP-Seq(GSE60143)/Homer	TAAACCCT	1e0	-9.155e-01	1.0000	220.0	1.10%	535.8	1.08%
TF3A(C2H2)/col-TF3A-DAP-Seq(GSE60143)/Homer	NNDDGAGGAGGWNNN	1e0	-9.054e-01	1.0000	2310.0	11.55%	5714.5	11.48%
LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer	ATGATTRATG	1e0	-9.050e-01	1.0000	1591.0	7.95%	3930.1	7.90%
GT2(Trihelix)/colamp-GT2-DAP-Seq(GSE60143)/Homer	AMGGTAAAWWWN	1e0	-9.048e-01	1.0000	1343.0	6.71%	3315.8	6.66%
ZML1(C2C2gata)/colamp-ZML1-DAP-Seq(GSE60143)/Homer	ATCWYRACCGTTSRW	1e0	-9.020e-01	1.0000	17.0	0.08%	38.3	0.08%
SPL1(SBP)/colamp-SPL1-DAP-Seq(GSE60143)/Homer	HYGTACDTWH	1e0	-8.958e-01	1.0000	2077.0	10.38%	5137.5	10.32%
bHLH157(bHLH)/col-bHLH157-DAP-Seq(GSE60143)/Homer	KACACGTCTCTY	1e0	-8.921e-01	1.0000	207.0	1.03%	504.7	1.01%
LOB(LOBAS2)/col-LOB-DAP-Seq(GSE60143)/Homer	CGCCGKAWWTTHCGS	1e0	-8.902e-01	1.0000	129.0	0.65%	312.1	0.63%
HSFB3(HSF)/colamp-HSFB3-DAP-Seq(GSE60143)/Homer	TTCTAGAAGMTTHTW	1e0	-8.902e-01	1.0000	9.0	0.04%	19.0	0.04%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-8.816e-01	1.0000	124.0	0.62%	300.6	0.60%
DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer	TAGCGCGC	1e0	-8.785e-01	1.0000	740.0	3.70%	1823.8	3.66%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-8.770e-01	1.0000	197.0	0.98%	480.1	0.96%
AT4G26030(C2H2)/col-AT4G26030-DAP-Seq(GSE60143)/Homer	BYYACCWACY	1e0	-8.760e-01	1.0000	1199.0	6.00%	2961.8	5.95%
RVE1(MYBrelated)/col-RVE1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-8.666e-01	1.0000	629.0	3.15%	1550.0	3.11%
AS2(LOBAS2)/col-AS2-DAP-Seq(GSE60143)/Homer	CCGDAAWWHMCGSCG	1e0	-8.618e-01	1.0000	48.0	0.24%	114.2	0.23%
At3g09600(MYBrelated)/colamp-At3g09600-DAP-Seq(GSE60143)/Homer	AAAATATCTT	1e0	-8.611e-01	1.0000	498.0	2.49%	1225.3	2.46%
SeqBias: GCW-triplet	GCWGCWGCWGCW	1e0	-8.580e-01	1.0000	19977.0	99.89%	49702.4	99.87%
MYB88(MYB)/col-MYB88-DAP-Seq(GSE60143)/Homer	HNACGCTCCT	1e0	-8.560e-01	1.0000	2461.0	12.31%	6096.1	12.25%
MYB73(MYB)/col-MYB73-DAP-Seq(GSE60143)/Homer	NNNNHAACNGHHDHN	1e0	-8.549e-01	1.0000	2971.0	14.85%	7363.7	14.80%
AT3G25990(Trihelix)/colamp-AT3G25990-DAP-Seq(GSE60143)/Homer	TTAACCATAG	1e0	-8.390e-01	1.0000	958.0	4.79%	2367.1	4.76%
IDD5(C2H2)/colamp-IDD5-DAP-Seq(GSE60143)/Homer	TTTTGTCTTTTTBTK	1e0	-8.364e-01	1.0000	997.0	4.98%	2464.8	4.95%
Unknown4/Drosophila-Promoters/Homer	AAAAATACCRMA	1e0	-8.339e-01	1.0000	129.0	0.65%	314.7	0.63%
MYB99(MYB)/colamp-MYB99-DAP-Seq(GSE60143)/Homer	GGTAGGTG	1e0	-8.312e-01	1.0000	1133.0	5.67%	2802.8	5.63%
OBP3(C2C2dof)/col-OBP3-DAP-Seq(GSE60143)/Homer	NYWACTTTTT	1e0	-8.293e-01	1.0000	4999.0	25.00%	12408.1	24.93%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-8.273e-01	1.0000	539.0	2.70%	1329.4	2.67%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-8.239e-01	1.0000	984.0	4.92%	2433.5	4.89%
At4g16750(AP2EREBP)/col-At4g16750-DAP-Seq(GSE60143)/Homer	HACCGACAHA	1e0	-8.182e-01	1.0000	500.0	2.50%	1233.1	2.48%
ATHB5(HB)/colamp-ATHB5-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-8.174e-01	1.0000	1103.0	5.51%	2729.9	5.49%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-8.144e-01	1.0000	818.0	4.09%	2022.9	4.06%
ATHB7(Homeobox)/col-ATHB7-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-8.067e-01	1.0000	885.0	4.42%	2189.0	4.40%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-7.941e-01	1.0000	812.0	4.06%	2009.2	4.04%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-7.923e-01	1.0000	4661.0	23.30%	11575.2	23.26%
WRKY17(WRKY)/colamp-WRKY17-DAP-Seq(GSE60143)/Homer	GCGTTGACTTTT	1e0	-7.811e-01	1.0000	9.0	0.04%	20.5	0.04%
MYB3R4(MYB)/col-MYB3R4-DAP-Seq(GSE60143)/Homer	AWWTAACCGTTR	1e0	-7.764e-01	1.0000	156.0	0.78%	383.1	0.77%
AT3G57600(AP2EREBP)/col-AT3G57600-DAP-Seq(GSE60143)/Homer	GGCGGTGG	1e0	-7.726e-01	1.0000	814.0	4.07%	2016.2	4.05%
AT5G47660(Trihelix)/colamp-AT5G47660-DAP-Seq(GSE60143)/Homer	AWTTTTACCG	1e0	-7.705e-01	1.0000	1944.0	9.72%	4824.6	9.69%
ESE1(AP2EREBP)/col-ESE1-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	-7.599e-01	1.0000	733.0	3.67%	1816.8	3.65%
AT5G23930(mTERF)/col-AT5G23930-DAP-Seq(GSE60143)/Homer	GGCGGCTG	1e0	-7.562e-01	1.0000	2345.0	11.72%	5823.1	11.70%
DEL2(E2FDP)/col-DEL2-DAP-Seq(GSE60143)/Homer	WTTTCSCGCC	1e0	-7.555e-01	1.0000	480.0	2.40%	1188.8	2.39%
At1g72010(TCP)/colamp-At1g72010-DAP-Seq(GSE60143)/Homer	GGDCCCAC	1e0	-7.551e-01	1.0000	666.0	3.33%	1650.0	3.32%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-7.531e-01	1.0000	1241.0	6.21%	3079.3	6.19%
PHV(HB)/col-PHV-DAP-Seq(GSE60143)/Homer	RTAATSATTA	1e0	-7.484e-01	1.0000	421.0	2.10%	1042.9	2.10%
MYB3(MYB)/Arabidopsis-MYB3-ChIP-Seq(GSE80564)/Homer	GKTAGGTRGG	1e0	-7.469e-01	1.0000	2344.0	11.72%	5822.4	11.70%
MYB17(MYB)/colamp-MYB17-DAP-Seq(GSE60143)/Homer	GGTAGGTGRG	1e0	-7.345e-01	1.0000	689.0	3.45%	1709.0	3.43%
ANAC017(NAC)/colamp-ANAC017-DAP-Seq(GSE60143)/Homer	TMCTTGNNNNNCAAG	1e0	-7.342e-01	1.0000	92.0	0.46%	227.0	0.46%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-7.333e-01	1.0000	1195.0	5.97%	2967.6	5.96%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-7.329e-01	1.0000	839.0	4.20%	2082.8	4.19%
ATHB25(ZFHD)/colamp-ATHB25-DAP-Seq(GSE60143)/Homer	TAATTAVB	1e0	-7.297e-01	1.0000	1562.0	7.81%	3881.0	7.80%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-7.293e-01	1.0000	1157.0	5.79%	2873.2	5.77%
GT3a(Trihelix)/col-GT3a-DAP-Seq(GSE60143)/Homer	WNACACGTGTYWWAW	1e0	-7.282e-01	1.0000	191.0	0.95%	472.3	0.95%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-7.231e-01	1.0000	114.0	0.57%	281.3	0.57%
WRKY21(WRKY)/colamp-WRKY21-DAP-Seq(GSE60143)/Homer	DCGTTGACTTTT	1e0	-7.222e-01	1.0000	116.0	0.58%	286.4	0.58%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-7.184e-01	1.0000	912.0	4.56%	2265.0	4.55%
bZIP69(bZIP)/col-bZIP69-DAP-Seq(GSE60143)/Homer	GACAGCTGKCAW	1e0	-7.177e-01	1.0000	192.0	0.96%	475.8	0.96%
VRN1(ABI3VP1)/col-VRN1-DAP-Seq(GSE60143)/Homer	TTTTTTTTTT	1e0	-7.164e-01	1.0000	371.0	1.85%	920.6	1.85%
AT3G42860(zfGRF)/col-AT3G42860-DAP-Seq(GSE60143)/Homer	CGTTGACTTN	1e0	-7.122e-01	1.0000	319.0	1.59%	791.8	1.59%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-7.082e-01	1.0000	684.0	3.42%	1699.8	3.42%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-7.040e-01	1.0000	2877.0	14.38%	7155.2	14.38%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-6.988e-01	1.0000	389.0	1.94%	966.9	1.94%
HSFA1E(HSF)/col-HSFA1E-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	-6.969e-01	1.0000	75.0	0.38%	185.2	0.37%
WIP5(C2H2)/colamp-WIP5-DAP-Seq(GSE60143)/Homer	TDTTCTCMAGGT	1e0	-6.883e-01	1.0000	1710.0	8.55%	4254.9	8.55%
GATA20(C2C2gata)/colamp-GATA20-DAP-Seq(GSE60143)/Homer	TNGATCNDNM	1e0	-6.872e-01	1.0000	2584.0	12.92%	6429.6	12.92%
WRKY8(WRKY)/colamp-WRKY8-DAP-Seq(GSE60143)/Homer	CGTTGACTTT	1e0	-6.848e-01	1.0000	160.0	0.80%	397.0	0.80%
At5g47390(MYBrelated)/col-At5g47390-DAP-Seq(GSE60143)/Homer	CTTATCCA	1e0	-6.749e-01	1.0000	1976.0	9.88%	4918.5	9.88%
At5g52660(MYBrelated)/colamp-At5g52660-DAP-Seq(GSE60143)/Homer	HAAAAATATCTW	1e0	-6.713e-01	1.0000	489.0	2.44%	1217.3	2.45%
LBD18(LOBAS2)/colamp-LBD18-DAP-Seq(GSE60143)/Homer	CKGAWWTTCHGS	1e0	-6.641e-01	1.0000	3766.0	18.83%	9375.7	18.84%
At5g04390(C2H2)/col200-At5g04390-DAP-Seq(GSE60143)/Homer	AGTGANDN	1e0	-6.591e-01	1.0000	10278.0	51.39%	25581.3	51.40%
ZIM(C2C2gata)/col-ZIM-DAP-Seq(GSE60143)/Homer	ATCSRACGGTYRAGA	1e0	-6.443e-01	1.0000	12.0	0.06%	29.3	0.06%
ATHB34(ZFHD)/colamp-ATHB34-DAP-Seq(GSE60143)/Homer	TRATTARS	1e0	-6.387e-01	1.0000	1063.0	5.32%	2650.2	5.33%
Initiator/Drosophila-Promoters/Homer	NTCAGTYG	1e0	-6.385e-01	1.0000	3620.0	18.10%	9017.9	18.12%
AGL13(MADS)/col-AGL13-DAP-Seq(GSE60143)/Homer	TWCCAWWTWTGGWAA	1e0	-6.340e-01	1.0000	49.0	0.24%	122.9	0.25%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-6.334e-01	1.0000	1473.0	7.36%	3672.8	7.38%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-6.308e-01	1.0000	551.0	2.76%	1375.8	2.76%
TGA2(bZIP)/colamp-TGA2-DAP-Seq(GSE60143)/Homer	ACGTCAYCHH	1e0	-6.273e-01	1.0000	524.0	2.62%	1308.1	2.63%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-6.268e-01	1.0000	27.0	0.14%	67.6	0.14%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-6.228e-01	1.0000	168.0	0.84%	420.4	0.84%
At5g08330(TCP)/col-At5g08330-DAP-Seq(GSE60143)/Homer	GGRCCCAC	1e0	-6.201e-01	1.0000	843.0	4.21%	2105.0	4.23%
MYB13(MYB)/col-MYB13-DAP-Seq(GSE60143)/Homer	HYCACCWACCHH	1e0	-6.185e-01	1.0000	869.0	4.35%	2169.7	4.36%
AT5G63260(C3H)/col-AT5G63260-DAP-Seq(GSE60143)/Homer	RAAAAAGTRA	1e0	-6.118e-01	1.0000	3747.0	18.73%	9339.6	18.77%
MYB58(MYB)/colamp-MYB58-DAP-Seq(GSE60143)/Homer	YYYACCWACC	1e0	-6.084e-01	1.0000	1175.0	5.88%	2933.5	5.89%
WRKY65(WRKY)/colamp-WRKY65-DAP-Seq(GSE60143)/Homer	AWWWAGTCAACG	1e0	-5.999e-01	1.0000	630.0	3.15%	1575.9	3.17%
AT5G59990(C2C2COlike)/colamp-AT5G59990-DAP-Seq(GSE60143)/Homer	TCTCAACCGTTCATT	1e0	-5.996e-01	1.0000	24.0	0.12%	60.8	0.12%
IDD2(C2H2)/colamp-IDD2-DAP-Seq(GSE60143)/Homer	HAVAAAAMGACAAAA	1e0	-5.937e-01	1.0000	159.0	0.80%	399.9	0.80%
AT2G20110(CPP)/colamp-AT2G20110-DAP-Seq(GSE60143)/Homer	ATTYAAATHY	1e0	-5.936e-01	1.0000	1790.0	8.95%	4468.3	8.98%
HDG1(Homeobox)/col100-HDG1-DAP-Seq(GSE60143)/Homer	DDYAATTAATGH	1e0	-5.910e-01	1.0000	469.0	2.34%	1174.6	2.36%
LMI1(HB)/colamp-LMI1-DAP-Seq(GSE60143)/Homer	AATTATTG	1e0	-5.897e-01	1.0000	749.0	3.74%	1873.4	3.76%
RAV1(RAV)/colamp-RAV1-DAP-Seq(GSE60143)/Homer	TWWTTTCTGTTG	1e0	-5.844e-01	1.0000	966.0	4.83%	2415.4	4.85%
HSF3(HSF)/colamp-HSF3-DAP-Seq(GSE60143)/Homer	NTTCTAGAAKCTTCT	1e0	-5.813e-01	1.0000	1040.0	5.20%	2600.3	5.23%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-5.753e-01	1.0000	1729.0	8.64%	4319.9	8.68%
WRKY30(WRKY)/colamp-WRKY30-DAP-Seq(GSE60143)/Homer	CGTTGACTTN	1e0	-5.751e-01	1.0000	348.0	1.74%	873.3	1.75%
MYB27(MYB)/colamp-MYB27-DAP-Seq(GSE60143)/Homer	TACCTAACWT	1e0	-5.744e-01	1.0000	157.0	0.78%	395.9	0.80%
HSF6(HSF)/col-HSF6-DAP-Seq(GSE60143)/Homer	TTYTAGAAGCTTCTA	1e0	-5.733e-01	1.0000	256.0	1.28%	643.3	1.29%
PTF1(TCP)/colamp-PTF1-DAP-Seq(GSE60143)/Homer	RDDGGGACCACA	1e0	-5.721e-01	1.0000	92.0	0.46%	232.6	0.47%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-5.613e-01	1.0000	310.0	1.55%	779.8	1.57%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-5.602e-01	1.0000	1404.0	7.02%	3511.2	7.06%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-5.590e-01	1.0000	126.0	0.63%	318.6	0.64%
GATA15(C2C2gata)/col-GATA15-DAP-Seq(GSE60143)/Homer	KATGATCA	1e0	-5.589e-01	1.0000	1926.0	9.63%	4813.5	9.67%
KAN2(G2like)/colamp-KAN2-DAP-Seq(GSE60143)/Homer	ATATTCTY	1e0	-5.557e-01	1.0000	2014.0	10.07%	5033.3	10.11%
FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer	HHCACGCGCBTN	1e0	-5.497e-01	1.0000	237.0	1.19%	597.9	1.20%
AT5G05550(Trihelix)/col-AT5G05550-DAP-Seq(GSE60143)/Homer	HDNHDTCKCCGGMGA	1e0	-5.456e-01	1.0000	1559.0	7.80%	3900.6	7.84%
ATHB40(HB)/col-ATHB40-DAP-Seq(GSE60143)/Homer	HCAATWATTG	1e0	-5.443e-01	1.0000	855.0	4.28%	2143.8	4.31%
At3g12730(G2like)/colamp-At3g12730-DAP-Seq(GSE60143)/Homer	AAGATTCT	1e0	-5.401e-01	1.0000	1996.0	9.98%	4991.5	10.03%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-5.366e-01	1.0000	2106.0	10.53%	5266.5	10.58%
AT2G28920(ND)/col-AT2G28920-DAP-Seq(GSE60143)/Homer	WAGATATTTWTW	1e0	-5.326e-01	1.0000	280.0	1.40%	706.8	1.42%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	-5.314e-01	1.0000	25.0	0.12%	64.5	0.13%
AT5G25475(ABI3VP1)/col-AT5G25475-DAP-Seq(GSE60143)/Homer	RNNRNCAAGCADNDB	1e0	-5.305e-01	1.0000	1774.0	8.87%	4439.9	8.92%
LBD23(LOBAS2)/colamp-LBD23-DAP-Seq(GSE60143)/Homer	GCGNAWWWTNCGCYW	1e0	-5.195e-01	1.0000	1011.0	5.05%	2536.9	5.10%
MYB81(MYB)/col-MYB81-DAP-Seq(GSE60143)/Homer	NWAACSGWTWNN	1e0	-5.180e-01	1.0000	2129.0	10.64%	5327.8	10.71%
RRTF1(AP2EREBP)/colamp-RRTF1-DAP-Seq(GSE60143)/Homer	CCGCCGCHATTT	1e0	-5.114e-01	1.0000	158.0	0.79%	402.0	0.81%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-5.088e-01	1.0000	541.0	2.71%	1362.1	2.74%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-5.073e-01	1.0000	1409.0	7.04%	3532.3	7.10%
SOL1(CPP)/colamp-SOL1-DAP-Seq(GSE60143)/Homer	ATTTAAATHN	1e0	-5.038e-01	1.0000	1873.0	9.37%	4691.5	9.43%
AT1G20910(ARID)/col-AT1G20910-DAP-Seq(GSE60143)/Homer	THAATTRAWN	1e0	-5.029e-01	1.0000	1653.0	8.27%	4142.1	8.32%
WRKY42(WRKY)/colamp-WRKY42-DAP-Seq(GSE60143)/Homer	NAAAGTCAACGN	1e0	-5.018e-01	1.0000	490.0	2.45%	1235.7	2.48%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-4.999e-01	1.0000	3204.0	16.02%	8012.9	16.10%
At5g66730(C2H2)/colamp-At5g66730-DAP-Seq(GSE60143)/Homer	TTTGTCKTTTTK	1e0	-4.959e-01	1.0000	345.0	1.73%	872.3	1.75%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-4.956e-01	1.0000	99.0	0.50%	253.1	0.51%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-4.863e-01	1.0000	275.0	1.38%	697.9	1.40%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	-4.859e-01	1.0000	13.0	0.07%	35.0	0.07%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	-4.859e-01	1.0000	13.0	0.07%	34.4	0.07%
WRKY45(WRKY)/col-WRKY45-DAP-Seq(GSE60143)/Homer	HNNNKTTGACTWWNH	1e0	-4.855e-01	1.0000	540.0	2.70%	1362.8	2.74%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-4.851e-01	1.0000	1749.0	8.74%	4385.7	8.81%
At1g19210(AP2EREBP)/colamp-At1g19210-DAP-Seq(GSE60143)/Homer	HCACCGACCAHN	1e0	-4.851e-01	1.0000	1079.0	5.39%	2711.2	5.45%
At4g32800(AP2EREBP)/colamp-At4g32800-DAP-Seq(GSE60143)/Homer	DYCACCGACAHWWWH	1e0	-4.845e-01	1.0000	70.0	0.35%	180.6	0.36%
REM19(REM)/colamp-REM19-DAP-Seq(GSE60143)/Homer	AAAAAAAA	1e0	-4.777e-01	1.0000	969.0	4.84%	2437.0	4.90%
HAT1(Homeobox)/col-HAT1-DAP-Seq(GSE60143)/Homer	SCAATCATTGNN	1e0	-4.738e-01	1.0000	169.0	0.84%	431.3	0.87%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-4.738e-01	1.0000	763.0	3.82%	1922.9	3.86%
CELF2(RRM)/JSL1-CELF2-CLIP-Seq(GSE71264)/Homer	RGTGTCAG	1e0	-4.678e-01	1.0000	483.0	2.42%	1221.9	2.46%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-4.650e-01	1.0000	14.0	0.07%	37.2	0.07%
MYB107(MYB)/col-MYB107-DAP-Seq(GSE60143)/Homer	RGTWGGTRRR	1e0	-4.647e-01	1.0000	2125.0	10.62%	5328.6	10.71%
AT3G10113(MYBrelated)/col-AT3G10113-DAP-Seq(GSE60143)/Homer	WNAAATATCWWN	1e0	-4.634e-01	1.0000	486.0	2.43%	1229.7	2.47%
HAT5(Homeobox)/colamp-HAT5-DAP-Seq(GSE60143)/Homer	DCAATWATTG	1e0	-4.630e-01	1.0000	143.0	0.71%	366.4	0.74%
GATA19(C2C2gata)/colamp-GATA19-DAP-Seq(GSE60143)/Homer	ATCSGATCVG	1e0	-4.618e-01	1.0000	61.0	0.30%	158.6	0.32%
At5g08750(C3H)/col-At5g08750-DAP-Seq(GSE60143)/Homer	NWDTTGCGGCTR	1e0	-4.483e-01	1.0000	393.0	1.97%	997.8	2.01%
AT1G77200(AP2EREBP)/colamp-AT1G77200-DAP-Seq(GSE60143)/Homer	ACCGACAHWD	1e0	-4.482e-01	1.0000	518.0	2.59%	1311.8	2.64%
AGL25(MADS)/colamp-AGL25-DAP-Seq(GSE60143)/Homer	TTTCCATWTWTGGAA	1e0	-4.479e-01	1.0000	60.0	0.30%	156.9	0.32%
E2FA(E2FDP)/colamp-E2FA-DAP-Seq(GSE60143)/Homer	WWTGGCGCCAWWWNN	1e0	-4.467e-01	1.0000	502.0	2.51%	1271.2	2.55%
SGR5(C2H2)/colamp-SGR5-DAP-Seq(GSE60143)/Homer	TTTGTCTTTTTT	1e0	-4.426e-01	1.0000	1024.0	5.12%	2580.1	5.18%
PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer	HAATAAAGNN	1e0	-4.399e-01	1.0000	2305.0	11.53%	5783.2	11.62%
MYB98(MYB)/col-MYB98-DAP-Seq(GSE60143)/Homer	NWDCCGTTAC	1e0	-4.322e-01	1.0000	355.0	1.77%	903.8	1.82%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-4.320e-01	1.0000	50.0	0.25%	131.0	0.26%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-4.290e-01	1.0000	366.0	1.83%	931.9	1.87%
MYB92(MYB)/colamp-MYB92-DAP-Seq(GSE60143)/Homer	GGTAGGTR	1e0	-4.284e-01	1.0000	1208.0	6.04%	3043.5	6.12%
AtIDD11(C2H2)/colamp-AtIDD11-DAP-Seq(GSE60143)/Homer	TTTGTCGTTT	1e0	-4.234e-01	1.0000	489.0	2.44%	1241.1	2.49%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-4.226e-01	1.0000	3895.0	19.48%	9756.8	19.61%
LCL1(MYBrelated)/colamp-LCL1-DAP-Seq(GSE60143)/Homer	NAAAATATCTWHWWN	1e0	-4.119e-01	1.0000	165.0	0.83%	425.1	0.85%
LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer	ADAAATATCT	1e0	-4.072e-01	1.0000	1145.0	5.73%	2889.1	5.81%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-4.067e-01	1.0000	2968.0	14.84%	7447.4	14.97%
HSFB4(HSF)/col-HSFB4-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	-4.062e-01	1.0000	28.0	0.14%	76.0	0.15%
CDF3(C2C2dof)/colamp-CDF3-DAP-Seq(GSE60143)/Homer	AAAAGTRM	1e0	-4.054e-01	1.0000	2720.0	13.60%	6828.4	13.72%
HSF7(HSF)/colamp-HSF7-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	-4.023e-01	1.0000	188.0	0.94%	484.9	0.97%
WRKY50(WRKY)/col-WRKY50-DAP-Seq(GSE60143)/Homer	NNTTGACTWNNGNNN	1e0	-4.019e-01	1.0000	1373.0	6.87%	3461.4	6.96%
MYB39(MYB)/col-MYB39-DAP-Seq(GSE60143)/Homer	WWAARKTAGGTGRAA	1e0	-3.987e-01	1.0000	154.0	0.77%	398.3	0.80%
BIM3(bHLH)/col-BIM3-DAP-Seq(GSE60143)/Homer	TWVTCACGTGAB	1e0	-3.981e-01	1.0000	141.0	0.70%	365.1	0.73%
SPL13(SBP)/col-SPL13-DAP-Seq(GSE60143)/Homer	WAHTGTACGGAH	1e0	-3.936e-01	1.0000	63.0	0.32%	166.7	0.33%
EMB1789(C3H)/col-EMB1789-DAP-Seq(GSE60143)/Homer	TWTTTACCGYND	1e0	-3.894e-01	1.0000	433.0	2.17%	1104.2	2.22%
At4g38000(C2C2dof)/col-At4g38000-DAP-Seq(GSE60143)/Homer	WWWTWACTTTTT	1e0	-3.880e-01	1.0000	1560.0	7.80%	3932.3	7.90%
At5g58900(MYBrelated)/colamp-At5g58900-DAP-Seq(GSE60143)/Homer	WWWTYTTATCTWWWW	1e0	-3.872e-01	1.0000	2626.0	13.13%	6598.4	13.26%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-3.823e-01	1.0000	1296.0	6.48%	3272.4	6.58%
At4g36780(BZR)/col-At4g36780-DAP-Seq(GSE60143)/Homer	NNNNNNCACGTGNNN	1e0	-3.815e-01	1.0000	328.0	1.64%	840.3	1.69%
RKD2(RWPRK)/colamp-RKD2-DAP-Seq(GSE60143)/Homer	GACKTTTCRDCTTCC	1e0	-3.805e-01	1.0000	870.0	4.35%	2204.2	4.43%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-3.773e-01	1.0000	312.0	1.56%	800.3	1.61%
MYB93(MYB)/colamp-MYB93-DAP-Seq(GSE60143)/Homer	GGTAGGTGRD	1e0	-3.771e-01	1.0000	1482.0	7.41%	3739.4	7.51%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-3.769e-01	1.0000	1472.0	7.36%	3714.7	7.46%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-3.767e-01	1.0000	1132.0	5.66%	2862.6	5.75%
Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer	CCCACGTGCT	1e0	-3.735e-01	1.0000	462.0	2.31%	1179.3	2.37%
At1g76110(ARID)/colamp-At1g76110-DAP-Seq(GSE60143)/Homer	ATTTAATG	1e0	-3.727e-01	1.0000	622.0	3.11%	1582.4	3.18%
AT1G76870(Trihelix)/col-AT1G76870-DAP-Seq(GSE60143)/Homer	AAAACCRGWW	1e0	-3.717e-01	1.0000	527.0	2.63%	1343.3	2.70%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-3.691e-01	1.0000	1542.0	7.71%	3891.4	7.82%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-3.666e-01	1.0000	694.0	3.47%	1765.0	3.55%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-3.665e-01	1.0000	2839.0	14.19%	7136.2	14.34%
At1g78700(BZR)/col-At1g78700-DAP-Seq(GSE60143)/Homer	NNNNCACGTGNNNNN	1e0	-3.635e-01	1.0000	332.0	1.66%	852.1	1.71%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-3.606e-01	1.0000	2186.0	10.93%	5505.5	11.06%
BIM2(bHLH)/col-BIM2-DAP-Seq(GSE60143)/Homer	NNNNCACGTGNN	1e0	-3.548e-01	1.0000	1222.0	6.11%	3092.6	6.21%
AT3G09735(S1Falike)/col-AT3G09735-DAP-Seq(GSE60143)/Homer	TTCTAGAANMTTCTA	1e0	-3.533e-01	1.0000	419.0	2.10%	1073.6	2.16%
SFP1/SacCer-Promoters/Homer	DDAAAAATTTTY	1e0	-3.471e-01	1.0000	85.0	0.43%	225.6	0.45%
MYB96(MYB)/colamp-MYB96-DAP-Seq(GSE60143)/Homer	WGGTRGTTGG	1e0	-3.445e-01	1.0000	1210.0	6.05%	3064.2	6.16%
At1g75490(AP2EREBP)/colamp-At1g75490-DAP-Seq(GSE60143)/Homer	CACCGMCT	1e0	-3.438e-01	1.0000	1774.0	8.87%	4478.8	9.00%
MYB74(MYB)/colamp-MYB74-DAP-Seq(GSE60143)/Homer	YYYACCTACCWH	1e0	-3.355e-01	1.0000	673.0	3.36%	1716.1	3.45%
AT1G23810(Orphan)/col-AT1G23810-DAP-Seq(GSE60143)/Homer	TTCTAGAAGSTTCTA	1e0	-3.315e-01	1.0000	32.0	0.16%	89.0	0.18%
SeqBias: C/A-bias	MMMMMMMMMM	1e0	-3.307e-01	1.0000	19949.0	99.74%	49647.5	99.76%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-3.292e-01	1.0000	199.0	1.00%	518.7	1.04%
TCX2(CPP)/colamp-TCX2-DAP-Seq(GSE60143)/Homer	NNWWTTYRAAHN	1e0	-3.249e-01	1.0000	1907.0	9.54%	4816.2	9.68%
CRC(C2C2YABBY)/col-CRC-DAP-Seq(GSE60143)/Homer	TWATSATA	1e0	-3.225e-01	1.0000	1641.0	8.21%	4150.3	8.34%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-3.215e-01	1.0000	2457.0	12.29%	6194.6	12.45%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-3.149e-01	1.0000	632.0	3.16%	1616.5	3.25%
JGL(C2H2)/col-JGL-DAP-Seq(GSE60143)/Homer	ACYTTCAGTT	1e0	-3.136e-01	1.0000	2496.0	12.48%	6294.0	12.65%
Adof1(C2C2dof)/col-Adof1-DAP-Seq(GSE60143)/Homer	NRWAAAGYDV	1e0	-3.124e-01	1.0000	4341.0	21.70%	10906.2	21.92%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-3.124e-01	1.0000	1845.0	9.22%	4664.7	9.37%
EPR1(MYBrelated)/colamp-EPR1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-3.111e-01	1.0000	405.0	2.02%	1043.1	2.10%
LHY1(MYBrelated)/col-LHY1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-3.111e-01	1.0000	405.0	2.02%	1043.1	2.10%
SeqBias: polyA-repeat	AAAAAAAAAA	1e0	-3.098e-01	1.0000	19433.0	97.17%	48394.8	97.25%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-2.994e-01	1.0000	589.0	2.94%	1510.5	3.04%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-2.981e-01	1.0000	1609.0	8.04%	4076.8	8.19%
COG1(C2C2dof)/col-COG1-DAP-Seq(GSE60143)/Homer	DAAAAAGTGA	1e0	-2.978e-01	1.0000	2169.0	10.85%	5480.3	11.01%
WRKY40(WRKY)/colamp-WRKY40-DAP-Seq(GSE60143)/Homer	AHWAGTCAAC	1e0	-2.970e-01	1.0000	789.0	3.94%	2015.2	4.05%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-2.934e-01	1.0000	805.0	4.03%	2056.1	4.13%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-2.922e-01	1.0000	267.0	1.33%	695.9	1.40%
GT1(Trihelix)/col-GT1-DAP-Seq(GSE60143)/Homer	TTAACCATGGTTAAD	1e0	-2.903e-01	1.0000	18.0	0.09%	52.9	0.11%
AIL7(AP2EREBP)/colamp-AIL7-DAP-Seq(GSE60143)/Homer	KCACRAWTYYCGAGG	1e0	-2.883e-01	1.0000	491.0	2.46%	1264.7	2.54%
HSFA6A(HSF)/col-HSFA6A-DAP-Seq(GSE60143)/Homer	RGAAGNTTCTAGAAN	1e0	-2.881e-01	1.0000	25.0	0.12%	71.6	0.14%
bZIP3(bZIP)/col-bZIP3-DAP-Seq(GSE60143)/Homer	DWKNHSACGTGGCAD	1e0	-2.872e-01	1.0000	606.0	3.03%	1555.9	3.13%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-2.856e-01	1.0000	653.0	3.26%	1674.8	3.37%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-2.839e-01	1.0000	154.0	0.77%	407.3	0.82%
SPL5(SBP)/colamp-SPL5-DAP-Seq(GSE60143)/Homer	NNHGTACGGHNN	1e0	-2.835e-01	1.0000	267.0	1.33%	696.1	1.40%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-2.808e-01	1.0000	718.0	3.59%	1839.9	3.70%
EIN3(EIL)/col-EIN3-DAP-Seq(GSE60143)/Homer	ARATTCAATGWATYT	1e0	-2.792e-01	1.0000	148.0	0.74%	392.7	0.79%
MYB67(MYB)/col-MYB67-DAP-Seq(GSE60143)/Homer	YYYACCTAAC	1e0	-2.771e-01	1.0000	1138.0	5.69%	2898.7	5.82%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-2.756e-01	1.0000	433.0	2.17%	1119.2	2.25%
BPC1(BBRBPC)/colamp-BPC1-DAP-Seq(GSE60143)/Homer	GARGAGAGAGAA	1e0	-2.751e-01	1.0000	994.0	4.97%	2536.8	5.10%
At3g60580(C2H2)/col-At3g60580-DAP-Seq(GSE60143)/Homer	WTTYTACT	1e0	-2.733e-01	1.0000	9292.0	46.46%	23266.9	46.75%
ATHB23(ZFHD)/col-ATHB23-DAP-Seq(GSE60143)/Homer	HTAATTARNN	1e0	-2.716e-01	1.0000	1180.0	5.90%	3005.7	6.04%
FUS3(ABI3VP1)/col-FUS3-DAP-Seq(GSE60143)/Homer	DNNWTNTGCATGKNN	1e0	-2.715e-01	1.0000	1347.0	6.73%	3425.1	6.88%
OBP4(C2C2dof)/col-OBP4-DAP-Seq(GSE60143)/Homer	WTTHACTTTTTB	1e0	-2.684e-01	1.0000	2074.0	10.37%	5251.4	10.55%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-2.667e-01	1.0000	569.0	2.84%	1465.7	2.95%
IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer	CACGTGCC	1e0	-2.667e-01	1.0000	2280.0	11.40%	5768.2	11.59%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-2.665e-01	1.0000	6068.0	30.34%	15236.5	30.62%
AT4G27900(C2C2COlike)/col-AT4G27900-DAP-Seq(GSE60143)/Homer	TCTCVACCGTTSATT	1e0	-2.653e-01	1.0000	3.0	0.01%	10.2	0.02%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-2.643e-01	1.0000	750.0	3.75%	1924.0	3.87%
Unknown3/Arabidopsis-Promoters/Homer	AYTAAACCGG	1e0	-2.608e-01	1.0000	133.0	0.66%	355.4	0.71%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-2.603e-01	1.0000	194.0	0.97%	512.6	1.03%
MS188(MYB)/colamp-MS188-DAP-Seq(GSE60143)/Homer	WARKTAGGTRRA	1e0	-2.598e-01	1.0000	855.0	4.28%	2189.3	4.40%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-2.576e-01	1.0000	1511.0	7.56%	3841.0	7.72%
WRKY26(WRKY)/colamp-WRKY26-DAP-Seq(GSE60143)/Homer	CGTTGACTWDKN	1e0	-2.571e-01	1.0000	677.0	3.38%	1740.1	3.50%
WRKY47(WRKY)/colamp-WRKY47-DAP-Seq(GSE60143)/Homer	WAAGTCAACGBT	1e0	-2.560e-01	1.0000	308.0	1.54%	804.7	1.62%
WRKY15(WRKY)/col-WRKY15-DAP-Seq(GSE60143)/Homer	VGTTGACTWW	1e0	-2.498e-01	1.0000	1326.0	6.63%	3378.4	6.79%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-2.493e-01	1.0000	418.0	2.09%	1085.5	2.18%
GEI-11(Myb?)/cElegans-L4-GEI11-ChIP-Seq(modEncode)/Homer	CCGACAYYTYACGGG	1e0	-2.467e-01	1.0000	46.0	0.23%	129.7	0.26%
WRKY14(WRKY)/colamp-WRKY14-DAP-Seq(GSE60143)/Homer	NCGTTGACTTTN	1e0	-2.402e-01	1.0000	648.0	3.24%	1670.7	3.36%
HSF21(HSF)/col-HSF21-DAP-Seq(GSE60143)/Homer	CTTCTAGAAGMTTYW	1e0	-2.389e-01	1.0000	25.0	0.12%	73.6	0.15%
SPL3(SBP)/colamp-SPL3-DAP-Seq(GSE60143)/Homer	WDTTGTACGGAH	1e0	-2.389e-01	1.0000	25.0	0.12%	73.5	0.15%
ABF1/SacCer-Promoters/Homer	CGTRNAAARTGA	1e0	-2.386e-01	1.0000	162.0	0.81%	432.2	0.87%
At1g64620(C2C2dof)/colamp-At1g64620-DAP-Seq(GSE60143)/Homer	CACTTTTT	1e0	-2.384e-01	1.0000	2241.0	11.21%	5681.0	11.42%
ANAC046(NAC)/colamp-ANAC046-DAP-Seq(GSE60143)/Homer	ACACGYWAYC	1e0	-2.362e-01	1.0000	2523.0	12.62%	6388.3	12.84%
At1g74840(MYBrelated)/col100-At1g74840-DAP-Seq(GSE60143)/Homer	YHTTATCCAWWT	1e0	-2.352e-01	1.0000	932.0	4.66%	2389.2	4.80%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-2.330e-01	1.0000	448.0	2.24%	1164.4	2.34%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-2.323e-01	1.0000	79.0	0.40%	217.5	0.44%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-2.268e-01	1.0000	101.0	0.51%	275.9	0.55%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-2.263e-01	1.0000	1186.0	5.93%	3032.1	6.09%
BIM1(bHLH)/colamp-BIM1-DAP-Seq(GSE60143)/Homer	NNNNNNVTCACGTGM	1e0	-2.205e-01	1.0000	105.0	0.53%	286.6	0.58%
ATHB13(Homeobox)/col-ATHB13-DAP-Seq(GSE60143)/Homer	CAATAATT	1e0	-2.201e-01	1.0000	1196.0	5.98%	3059.9	6.15%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-2.171e-01	1.0000	250.0	1.25%	661.5	1.33%
bHLH28(bHLH)/col-bHLH28-DAP-Seq(GSE60143)/Homer	NHHTGTACGGAH	1e0	-2.095e-01	1.0000	138.0	0.69%	373.3	0.75%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-2.077e-01	1.0000	192.0	0.96%	513.1	1.03%
Replumless(BLH)/Arabidopsis-RPL.GFP-ChIP-Seq(GSE78727)/Homer	HGTCWHATCA	1e0	-2.057e-01	1.0000	1532.0	7.66%	3910.5	7.86%
RAP21(AP2EREBP)/colamp-RAP21-DAP-Seq(GSE60143)/Homer	BCACCGACAHNN	1e0	-2.049e-01	1.0000	101.0	0.51%	277.3	0.56%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-2.023e-01	1.0000	2347.0	11.73%	5960.6	11.98%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-2.019e-01	1.0000	443.0	2.21%	1157.7	2.33%
TCP1(TCP)/col-TCP1-DAP-Seq(GSE60143)/Homer	GGGGGCCCMMCN	1e0	-1.990e-01	1.0000	422.0	2.11%	1104.6	2.22%
SeqBias: G/A bias	RRRRRRRRRR	1e0	-1.968e-01	1.0000	19972.0	99.86%	49706.6	99.88%
AT1G71450(AP2EREBP)/col-AT1G71450-DAP-Seq(GSE60143)/Homer	DHDWTGTCGGTG	1e0	-1.954e-01	1.0000	1306.0	6.53%	3344.7	6.72%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-1.950e-01	1.0000	3169.0	15.85%	8025.3	16.13%
WRKY71(WRKY)/col-WRKY71-DAP-Seq(GSE60143)/Homer	CKTTGACYWW	1e0	-1.947e-01	1.0000	1014.0	5.07%	2607.4	5.24%
WRKY31(WRKY)/colamp-WRKY31-DAP-Seq(GSE60143)/Homer	NCGTTGACTWWK	1e0	-1.913e-01	1.0000	944.0	4.72%	2432.0	4.89%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-1.908e-01	1.0000	1158.0	5.79%	2972.6	5.97%
AT4G00250(GeBP)/col-AT4G00250-DAP-Seq(GSE60143)/Homer	WDTGGATAAKRT	1e0	-1.881e-01	1.0000	736.0	3.68%	1905.4	3.83%
WRKY20(WRKY)/col-WRKY20-DAP-Seq(GSE60143)/Homer	CKTTGACYWD	1e0	-1.871e-01	1.0000	987.0	4.93%	2541.5	5.11%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-1.853e-01	1.0000	437.0	2.19%	1145.9	2.30%
GBF3(bZIP)/Arabidopsis-GBF3-ChIP-Seq(GSE80564)/Homer	TGCCACGTSAYC	1e0	-1.807e-01	1.0000	495.0	2.48%	1294.4	2.60%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-1.790e-01	1.0000	294.0	1.47%	780.6	1.57%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-1.761e-01	1.0000	1385.0	6.93%	3550.9	7.14%
WRKY27(WRKY)/colamp-WRKY27-DAP-Seq(GSE60143)/Homer	NHGTTGACYTWD	1e0	-1.757e-01	1.0000	1215.0	6.08%	3121.9	6.27%
DREB26(AP2EREBP)/col-DREB26-DAP-Seq(GSE60143)/Homer	CCACCGACAH	1e0	-1.704e-01	1.0000	165.0	0.83%	448.2	0.90%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-1.701e-01	1.0000	487.0	2.44%	1276.4	2.56%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-1.684e-01	1.0000	256.0	1.28%	684.4	1.38%
AT5G22990(C2H2)/col-AT5G22990-DAP-Seq(GSE60143)/Homer	WCGAHDTCGWHN	1e0	-1.671e-01	1.0000	28.0	0.14%	85.3	0.17%
AT3G58630(Trihelix)/col-AT3G58630-DAP-Seq(GSE60143)/Homer	TCTCCGGCGA	1e0	-1.650e-01	1.0000	115.0	0.57%	318.5	0.64%
LBD2(LOBAS2)/colamp-LBD2-DAP-Seq(GSE60143)/Homer	TCCGAWTTTTTCGGN	1e0	-1.640e-01	1.0000	229.0	1.15%	615.1	1.24%
ATHB33(ZFHD)/col-ATHB33-DAP-Seq(GSE60143)/Homer	NGTRATTAAK	1e0	-1.635e-01	1.0000	1736.0	8.68%	4440.4	8.92%
Pho4(bHLH)/Yeast-Pho4-ChIP-Seq(GSE29506)/Homer	AAGCACGTGBGD	1e0	-1.605e-01	1.0000	228.0	1.14%	613.5	1.23%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-1.575e-01	1.0000	53.0	0.27%	154.5	0.31%
TCP7(TCP)/col-TCP7-DAP-Seq(GSE60143)/Homer	GTGGGSCCCACHHNN	1e0	-1.573e-01	1.0000	687.0	3.44%	1789.9	3.60%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	-1.558e-01	1.0000	6.0	0.03%	22.2	0.04%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-1.548e-01	1.0000	763.0	3.82%	1983.7	3.99%
AT5G60130(ABI3VP1)/col-AT5G60130-DAP-Seq(GSE60143)/Homer	WTTYTAAGVAAA	1e0	-1.510e-01	1.0000	2776.0	13.88%	7062.8	14.19%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-1.484e-01	1.0000	1262.0	6.31%	3250.8	6.53%
WRKY24(WRKY)/colamp-WRKY24-DAP-Seq(GSE60143)/Homer	CGTTGACTWW	1e0	-1.454e-01	1.0000	1141.0	5.71%	2945.3	5.92%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-1.434e-01	1.0000	452.0	2.26%	1193.7	2.40%
WRKY3(WRKY)/col-WRKY3-DAP-Seq(GSE60143)/Homer	NCKTTGACYDDN	1e0	-1.430e-01	1.0000	815.0	4.08%	2119.2	4.26%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-1.425e-01	1.0000	2665.0	13.33%	6788.3	13.64%
WRKY29(WRKY)/colamp-WRKY29-DAP-Seq(GSE60143)/Homer	MGTTGACTTT	1e0	-1.424e-01	1.0000	1405.0	7.03%	3615.0	7.26%
TATA-box/Drosophila-Promoters/Homer	CTATAAAAGCSV	1e0	-1.419e-01	1.0000	51.0	0.26%	150.3	0.30%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-1.388e-01	1.0000	11.0	0.06%	38.1	0.08%
STZ(C2H2)/colamp-STZ-DAP-Seq(GSE60143)/Homer	HNBTCACT	1e0	-1.373e-01	1.0000	10411.0	52.05%	26139.7	52.53%
SUT1?/SacCer-Promoters/Homer	CCCCGCGC	1e0	-1.372e-01	1.0000	10335.0	51.68%	25950.4	52.15%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-1.352e-01	1.0000	1962.0	9.81%	5023.9	10.10%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-1.343e-01	1.0000	34.0	0.17%	105.0	0.21%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-1.337e-01	1.0000	289.0	1.44%	776.8	1.56%
At1g19000(MYBrelated)/colamp-At1g19000-DAP-Seq(GSE60143)/Homer	WWTGGATAADDT	1e0	-1.334e-01	1.0000	1115.0	5.58%	2884.7	5.80%
AT1G76880(Trihelix)/col-AT1G76880-DAP-Seq(GSE60143)/Homer	ACGGTAAAAW	1e0	-1.332e-01	1.0000	419.0	2.10%	1111.9	2.23%
AT5G66940(C2C2dof)/col-AT5G66940-DAP-Seq(GSE60143)/Homer	NNHACTTTWT	1e0	-1.299e-01	1.0000	3007.0	15.04%	7655.8	15.38%
At1g77640(AP2EREBP)/col-At1g77640-DAP-Seq(GSE60143)/Homer	TGTCGGTGGA	1e0	-1.264e-01	1.0000	124.0	0.62%	347.2	0.70%
MYB118(MYB)/colamp-MYB118-DAP-Seq(GSE60143)/Homer	TAWCCGTTAC	1e0	-1.259e-01	1.0000	315.0	1.57%	845.6	1.70%
E-box/Drosophila-Promoters/Homer	AACAGCTGTTHN	1e0	-1.249e-01	1.0000	368.0	1.84%	982.5	1.97%
MYB40(MYB)/col-MYB40-DAP-Seq(GSE60143)/Homer	TGGTAGGTRARA	1e0	-1.239e-01	1.0000	371.0	1.85%	990.5	1.99%
HSFC1(HSF)/col-HSFC1-DAP-Seq(GSE60143)/Homer	HTTCTAGAADCTTCT	1e0	-1.210e-01	1.0000	162.0	0.81%	448.4	0.90%
AT5G45580(G2like)/colamp-AT5G45580-DAP-Seq(GSE60143)/Homer	ADRGAATCTH	1e0	-1.201e-01	1.0000	2036.0	10.18%	5218.9	10.49%
Unknown6/Drosophila-Promoters/Homer	AATTTTAAAA	1e0	-1.169e-01	1.0000	856.0	4.28%	2233.6	4.49%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-1.169e-01	1.0000	1279.0	6.40%	3307.2	6.65%
DEAR5(AP2EREBP)/col-DEAR5-DAP-Seq(GSE60143)/Homer	NDWTGTCGGTGRWDN	1e0	-1.164e-01	1.0000	84.0	0.42%	242.1	0.49%
Knotted(Homeobox)/Corn-KN1-ChIP-Seq(GSE39161)/Homer	GAYGNGACRGGN	1e0	-1.159e-01	1.0000	1945.0	9.72%	4991.8	10.03%
LBD19(LOBAS2)/colamp-LBD19-DAP-Seq(GSE60143)/Homer	CCKGAAWTTCMGGAW	1e0	-1.138e-01	1.0000	2597.0	12.98%	6635.7	13.33%
DREB2(AP2EREBP)/col-DREB2-DAP-Seq(GSE60143)/Homer	TMACCGACATWA	1e0	-1.136e-01	1.0000	303.0	1.52%	817.6	1.64%
AT1G69570(C2C2dof)/col-AT1G69570-DAP-Seq(GSE60143)/Homer	WAAAAGTGHH	1e0	-1.132e-01	1.0000	1736.0	8.68%	4465.1	8.97%
SeqBias: polyC-repeat	CCCCCCCCCC	1e0	-1.120e-01	1.0000	19635.0	98.17%	48922.2	98.31%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-1.091e-01	1.0000	231.0	1.16%	631.2	1.27%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-1.084e-01	1.0000	8860.0	44.30%	22306.1	44.82%
Rap210(AP2EREBP)/col-Rap210-DAP-Seq(GSE60143)/Homer	TGTCGGCA	1e0	-1.082e-01	1.0000	379.0	1.90%	1015.4	2.04%
AT2G01818(PLATZ)/col-AT2G01818-DAP-Seq(GSE60143)/Homer	TCTAGAABSTTC	1e0	-1.077e-01	1.0000	130.0	0.65%	366.1	0.74%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-1.074e-01	1.0000	358.0	1.79%	961.1	1.93%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-1.047e-01	1.0000	83.0	0.41%	241.3	0.48%
AT1G10720(BSD)/col-AT1G10720-DAP-Seq(GSE60143)/Homer	TTCTAGAAKCTTCTA	1e0	-1.043e-01	1.0000	13.0	0.07%	46.2	0.09%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-1.029e-01	1.0000	201.0	1.00%	554.3	1.11%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-1.021e-01	1.0000	94.0	0.47%	271.9	0.55%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-9.984e-02	1.0000	808.0	4.04%	2118.5	4.26%
At5g18450(AP2EREBP)/col-At5g18450-DAP-Seq(GSE60143)/Homer	CACCGCTT	1e0	-9.908e-02	1.0000	1769.0	8.85%	4557.2	9.16%
Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer	MYGGTCACACTG	1e0	-9.709e-02	1.0000	254.0	1.27%	694.9	1.40%
AT2G15740(C2H2)/col-AT2G15740-DAP-Seq(GSE60143)/Homer	DHNDWATCGATD	1e0	-9.599e-02	1.0000	613.0	3.06%	1621.5	3.26%
GBF5(bZIP)/colamp-GBF5-DAP-Seq(GSE60143)/Homer	WKNWSACGTGGCAWN	1e0	-9.598e-02	1.0000	320.0	1.60%	866.6	1.74%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-9.583e-02	1.0000	3363.0	16.81%	8575.8	17.23%
At2g45680(TCP)/colamp-At2g45680-DAP-Seq(GSE60143)/Homer	GTGGGNCCCACNDND	1e0	-9.213e-02	1.0000	93.0	0.46%	270.7	0.54%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-9.090e-02	1.0000	2539.0	12.70%	6506.8	13.08%
AT1G01250(AP2EREBP)/col-AT1G01250-DAP-Seq(GSE60143)/Homer	YCACCGACAHTW	1e0	-8.977e-02	1.0000	46.0	0.23%	142.2	0.29%
STOP1(C2H2)/colamp-STOP1-DAP-Seq(GSE60143)/Homer	DTATCTGGKGRAGGT	1e0	-8.907e-02	1.0000	548.0	2.74%	1457.9	2.93%
TCP3(TCP)/colamp-TCP3-DAP-Seq(GSE60143)/Homer	WGTGGTCCCAAHWWW	1e0	-8.727e-02	1.0000	243.0	1.21%	668.3	1.34%
ASHR1(ND)/col-ASHR1-DAP-Seq(GSE60143)/Homer	NTGGTGAN	1e0	-8.654e-02	1.0000	1923.0	9.62%	4955.3	9.96%
WRKY33(WRKY)/col-WRKY33-DAP-Seq(GSE60143)/Homer	CGTTGACYAW	1e0	-8.654e-02	1.0000	1038.0	5.19%	2711.1	5.45%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-8.413e-02	1.0000	1526.0	7.63%	3952.2	7.94%
WRKY18(WRKY)/col-WRKY18-DAP-Seq(GSE60143)/Homer	NNNTTGACYWNNNNN	1e0	-8.230e-02	1.0000	2259.0	11.29%	5807.8	11.67%
LIN-15B(Zf)/cElegans-L3-LIN15B-ChIP-Seq(modEncode)/Homer	CARTGGAGCGCRYTTGCATT	1e0	-8.149e-02	1.0000	5.0	0.03%	22.2	0.04%
CEJ1(AP2EREBP)/col-CEJ1-DAP-Seq(GSE60143)/Homer	WWTGTCGGTG	1e0	-8.133e-02	1.0000	690.0	3.45%	1825.6	3.67%
SeqBias: GA-repeat	GAGAGAGAGA	1e0	-8.075e-02	1.0000	11649.0	58.25%	29275.8	58.83%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-7.977e-02	1.0000	938.0	4.69%	2461.0	4.95%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-7.929e-02	1.0000	2340.0	11.70%	6014.7	12.09%
WRKY11(WRKY)/col-WRKY11-DAP-Seq(GSE60143)/Homer	SCGTTGACTTTN	1e0	-7.850e-02	1.0000	127.0	0.64%	364.9	0.73%
bZIP42(bZIP)/colamp-bZIP42-DAP-Seq(GSE60143)/Homer	GCCACGTCAGCA	1e0	-7.828e-02	1.0000	3.0	0.01%	15.1	0.03%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-7.741e-02	1.0000	1900.0	9.50%	4904.2	9.85%
SPL14(SBP)/col-SPL14-DAP-Seq(GSE60143)/Homer	NNWHTGTACGGAHNH	1e0	-7.432e-02	1.0000	84.0	0.42%	249.4	0.50%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-7.365e-02	1.0000	428.0	2.14%	1154.6	2.32%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-7.338e-02	1.0000	102.0	0.51%	298.4	0.60%
AT1G12630(AP2EREBP)/colamp-AT1G12630-DAP-Seq(GSE60143)/Homer	TGTCGGCA	1e0	-7.260e-02	1.0000	335.0	1.68%	913.7	1.84%
BPC6(BBRBPC)/col-BPC6-DAP-Seq(GSE60143)/Homer	YTYTCTCTCTCTCTA	1e0	-7.015e-02	1.0000	64.0	0.32%	195.7	0.39%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-6.886e-02	1.0000	3844.0	19.22%	9811.8	19.72%
M1BP(Zf)/S2R+-M1BP-ChIP-Seq(GSE49842)/Homer	CAGTGTGACCGT	1e0	-6.873e-02	1.0000	264.0	1.32%	729.3	1.47%
DDF2(AP2EREBP)/col-DDF2-DAP-Seq(GSE60143)/Homer	GATGTCGRCR	1e0	-6.853e-02	1.0000	14.0	0.07%	52.3	0.11%
WRKY25(WRKY)/colamp-WRKY25-DAP-Seq(GSE60143)/Homer	NNNNHRGTCAAMNNN	1e0	-6.842e-02	1.0000	1491.0	7.46%	3875.3	7.79%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-6.732e-02	1.0000	661.0	3.31%	1758.8	3.53%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-6.662e-02	1.0000	223.0	1.11%	622.7	1.25%
Unknown1/Arabidopsis-Promoters/Homer	RGGGTAWWWTHGTAA	1e0	-6.657e-02	1.0000	104.0	0.52%	305.4	0.61%
KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer	ARGAATAWWN	1e0	-6.583e-02	1.0000	1365.0	6.83%	3557.7	7.15%
WRKY75(WRKY)/col-WRKY75-DAP-Seq(GSE60143)/Homer	CGTTGACTWW	1e0	-6.319e-02	1.0000	1260.0	6.30%	3292.6	6.62%
RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer	TGCATGCA	1e0	-6.214e-02	1.0000	2916.0	14.58%	7484.3	15.04%
CBF1(AP2EREBP)/colamp-CBF1-DAP-Seq(GSE60143)/Homer	YRCCGACATN	1e0	-6.083e-02	1.0000	423.0	2.11%	1147.7	2.31%
AT1G44830(AP2EREBP)/col-AT1G44830-DAP-Seq(GSE60143)/Homer	NCCACCGACA	1e0	-5.975e-02	1.0000	216.0	1.08%	606.0	1.22%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-5.927e-02	1.0000	385.0	1.93%	1049.3	2.11%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-5.897e-02	1.0000	738.0	3.69%	1961.7	3.94%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-5.773e-02	1.0000	726.0	3.63%	1932.0	3.88%
AtGRF6(GRF)/col-AtGRF6-DAP-Seq(GSE60143)/Homer	NTGTCAGADNNNNNN	1e0	-5.765e-02	1.0000	1631.0	8.15%	4240.6	8.52%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-5.691e-02	1.0000	324.0	1.62%	891.5	1.79%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-5.660e-02	1.0000	411.0	2.05%	1118.2	2.25%
AZF1(C2H2)/colamp-AZF1-DAP-Seq(GSE60143)/Homer	DKSWCACT	1e0	-5.526e-02	1.0000	9367.0	46.84%	23640.8	47.51%
PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer	BCACGTGVDN	1e0	-5.286e-02	1.0000	1537.0	7.69%	4006.0	8.05%
ANAC038(NAC)/col-ANAC038-DAP-Seq(GSE60143)/Homer	ACACGTWAYC	1e0	-5.272e-02	1.0000	2813.0	14.06%	7236.8	14.54%
ATHB20(Homeobox)/colamp-ATHB20-DAP-Seq(GSE60143)/Homer	CAATHATT	1e0	-5.226e-02	1.0000	427.0	2.14%	1162.4	2.34%
ATHB18(Homeobox)/colamp-ATHB18-DAP-Seq(GSE60143)/Homer	YCAATSATTG	1e0	-5.221e-02	1.0000	172.0	0.86%	492.1	0.99%
GRF9(GRF)/colamp-GRF9-DAP-Seq(GSE60143)/Homer	NWCTGACANNNNNNN	1e0	-5.184e-02	1.0000	1377.0	6.88%	3600.5	7.24%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-5.150e-02	1.0000	64.0	0.32%	199.5	0.40%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e0	-5.059e-02	1.0000	5740.0	28.70%	14593.8	29.33%
PIF7(bHLH)/col-PIF7-DAP-Seq(GSE60143)/Homer	CCACGTGGNH	1e0	-4.960e-02	1.0000	239.0	1.20%	671.8	1.35%
WRKY22(WRKY)/colamp-WRKY22-DAP-Seq(GSE60143)/Homer	WWAAAGTCAACK	1e0	-4.907e-02	1.0000	743.0	3.72%	1981.5	3.98%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-4.807e-02	1.0000	186.0	0.93%	531.4	1.07%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-4.619e-02	1.0000	538.0	2.69%	1454.1	2.92%
WRKY55(WRKY)/col-WRKY55-DAP-Seq(GSE60143)/Homer	NCGTTGACTT	1e0	-4.560e-02	1.0000	1574.0	7.87%	4108.5	8.26%
bZIP48(bZIP)/colamp-bZIP48-DAP-Seq(GSE60143)/Homer	DDWWKVTSACGTGGC	1e0	-4.550e-02	1.0000	329.0	1.65%	910.4	1.83%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-4.463e-02	1.0000	1365.0	6.83%	3577.1	7.19%
AARE(HLH)/mES-cMyc-ChIP-Seq/Homer	GATTGCATCA	1e0	-4.206e-02	1.0000	116.0	0.58%	345.3	0.69%
TCP16(TCP)/colamp-TCP16-DAP-Seq(GSE60143)/Homer	GTGGDCCYNNNNNNN	1e0	-4.049e-02	1.0000	746.0	3.73%	1996.8	4.01%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-3.905e-02	1.0000	1865.0	9.32%	4856.4	9.76%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-3.832e-02	1.0000	139.0	0.69%	409.9	0.82%
DEAR3(AP2EREBP)/colamp-DEAR3-DAP-Seq(GSE60143)/Homer	BCACCGACAWNNNNN	1e0	-3.774e-02	1.0000	176.0	0.88%	509.5	1.02%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-3.736e-02	1.0000	859.0	4.29%	2290.2	4.60%
DREB19(AP2EREBP)/colamp-DREB19-DAP-Seq(GSE60143)/Homer	AATGTCGGTK	1e0	-3.699e-02	1.0000	354.0	1.77%	981.6	1.97%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-3.666e-02	1.0000	80.0	0.40%	248.6	0.50%
ABF1(bZIP)/Arabidopsis-ABF1-ChIP-Seq(GSE80564)/Homer	CACGTGGC	1e0	-3.532e-02	1.0000	1086.0	5.43%	2875.7	5.78%
GAGA-repeat/Arabidopsis-Promoters/Homer	CTCTCTCTCY	1e0	-3.492e-02	1.0000	1872.0	9.36%	4880.5	9.81%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-3.483e-02	1.0000	57.0	0.29%	184.5	0.37%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-3.442e-02	1.0000	101.0	0.51%	307.9	0.62%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-3.394e-02	1.0000	2.0	0.01%	15.0	0.03%
WRKY6(WRKY)/colamp-WRKY6-DAP-Seq(GSE60143)/Homer	NCGTTGACTWWD	1e0	-3.357e-02	1.0000	1123.0	5.62%	2972.4	5.97%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-3.299e-02	1.0000	5043.0	25.21%	12882.3	25.89%
At4g31060(AP2EREBP)/colamp-At4g31060-DAP-Seq(GSE60143)/Homer	CACCGACAAW	1e0	-3.203e-02	1.0000	235.0	1.18%	670.9	1.35%
PIF4(bHLH)/Seedling-PIF4-ChIP-Seq(GSE35315)/Homer	NNBCACGTGN	1e0	-3.188e-02	1.0000	1802.0	9.01%	4707.5	9.46%
ANAC047(NAC)/colamp-ANAC047-DAP-Seq(GSE60143)/Homer	WACACGTAACTT	1e0	-3.168e-02	1.0000	615.0	3.08%	1666.3	3.35%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-3.122e-02	1.0000	263.0	1.31%	745.1	1.50%
AT1G04880(ARID)/colamp-AT1G04880-DAP-Seq(GSE60143)/Homer	AAACTATATADTATA	1e0	-2.983e-02	1.0000	62.0	0.31%	200.9	0.40%
CDM1(C3H)/colamp-CDM1-DAP-Seq(GSE60143)/Homer	CCGAWAWTWTCGGAN	1e0	-2.950e-02	1.0000	36.0	0.18%	125.5	0.25%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-2.864e-02	1.0000	895.0	4.47%	2393.2	4.81%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-2.832e-02	1.0000	298.0	1.49%	840.7	1.69%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-2.766e-02	1.0000	291.0	1.46%	823.0	1.65%
bHLH74(bHLH)/col-bHLH74-DAP-Seq(GSE60143)/Homer	DRATCACGTGAB	1e0	-2.719e-02	1.0000	269.0	1.34%	764.9	1.54%
bHLH34(bHLH)/colamp-bHLH34-DAP-Seq(GSE60143)/Homer	HGWGRHWGACACGTG	1e0	-2.586e-02	1.0000	304.0	1.52%	858.5	1.73%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-2.582e-02	1.0000	284.0	1.42%	805.3	1.62%
ANAC079(NAC)/colamp-ANAC079-DAP-Seq(GSE60143)/Homer	TACACGCAACCT	1e0	-2.578e-02	1.0000	398.0	1.99%	1106.5	2.22%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-2.487e-02	1.0000	95.0	0.47%	295.4	0.59%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-2.402e-02	1.0000	743.0	3.72%	2007.7	4.03%
SPCH(bHLH)/Seedling-SPCH-ChIP-Seq(GSE57497)/Homer	WNBCACGTGA	1e0	-2.319e-02	1.0000	1381.0	6.91%	3649.7	7.33%
CBF3(AP2EREBP)/colamp-CBF3-DAP-Seq(GSE60143)/Homer	YNRCCGACATNN	1e0	-2.297e-02	1.0000	274.0	1.37%	781.7	1.57%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-2.274e-02	1.0000	1929.0	9.64%	5048.4	10.14%
At1g22810(AP2EREBP)/colamp-At1g22810-DAP-Seq(GSE60143)/Homer	BCACCGACANNN	1e0	-2.264e-02	1.0000	260.0	1.30%	744.8	1.50%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-2.210e-02	1.0000	189.0	0.95%	554.4	1.11%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-2.153e-02	1.0000	1238.0	6.19%	3286.1	6.60%
WRKY43(WRKY)/colamp-WRKY43-DAP-Seq(GSE60143)/Homer	NCGTTGACTTTT	1e0	-2.042e-02	1.0000	436.0	2.18%	1212.2	2.44%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-1.825e-02	1.0000	2224.0	11.12%	5810.9	11.68%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-1.779e-02	1.0000	346.0	1.73%	978.3	1.97%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-1.767e-02	1.0000	121.0	0.60%	372.6	0.75%
FRS9(ND)/col-FRS9-DAP-Seq(GSE60143)/Homer	RGAGAGAGAAAG	1e0	-1.761e-02	1.0000	433.0	2.17%	1208.1	2.43%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.746e-02	1.0000	165.0	0.83%	493.1	0.99%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-1.728e-02	1.0000	3616.0	18.08%	9338.1	18.76%
GAGA-repeat/SacCer-Promoters/Homer	CTYTCTYTCTCTCTC	1e0	-1.677e-02	1.0000	6942.0	34.71%	17695.2	35.56%
FEA4(bZIP)/Corn-FEA4-ChIP-Seq(GSE61954)/Homer	TGACGTCACS	1e0	-1.662e-02	1.0000	1408.0	7.04%	3734.0	7.50%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-1.629e-02	1.0000	1102.0	5.51%	2948.3	5.92%
TGA9(bZIP)/colamp-TGA9-DAP-Seq(GSE60143)/Homer	VTGACGTC	1e0	-1.612e-02	1.0000	1340.0	6.70%	3560.5	7.15%
SeqBias: TA-repeat	TATATATATA	1e0	-1.566e-02	1.0000	3503.0	17.52%	9059.3	18.20%
At4g28140(AP2EREBP)/colamp-At4g28140-DAP-Seq(GSE60143)/Homer	DCCACCGACCAW	1e0	-1.565e-02	1.0000	179.0	0.90%	533.8	1.07%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-1.538e-02	1.0000	303.0	1.52%	867.2	1.74%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-1.537e-02	1.0000	2338.0	11.69%	6109.8	12.28%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-1.514e-02	1.0000	2342.0	11.71%	6120.5	12.30%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-1.492e-02	1.0000	1939.0	9.70%	5095.3	10.24%
RAP211(AP2EREBP)/colamp-RAP211-DAP-Seq(GSE60143)/Homer	RGCCGGCYWW	1e0	-1.384e-02	1.0000	2900.0	14.50%	7541.2	15.15%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-1.281e-02	1.0000	1949.0	9.74%	5128.6	10.31%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-1.276e-02	1.0000	1022.0	5.11%	2751.2	5.53%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-1.275e-02	1.0000	1455.0	7.27%	3865.6	7.77%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-1.136e-02	1.0000	1471.0	7.36%	3911.5	7.86%
CBF4(AP2EREBP)/colamp-CBF4-DAP-Seq(GSE60143)/Homer	NRCCGACDWNNNNNN	1e0	-1.088e-02	1.0000	379.0	1.90%	1077.7	2.17%
dof42(C2C2dof)/col-dof42-DAP-Seq(GSE60143)/Homer	AAAAAGGC	1e0	-1.086e-02	1.0000	873.0	4.37%	2371.6	4.77%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.065e-02	1.0000	330.0	1.65%	947.5	1.90%
RLR1?/SacCer-Promoters/Homer	WTTTTCYYTTTT	1e0	-1.059e-02	1.0000	828.0	4.14%	2255.7	4.53%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-1.030e-02	1.0000	1811.0	9.05%	4786.5	9.62%
Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer	GGGAAAAMCCCG	1e0	-9.065e-03	1.0000	268.0	1.34%	784.9	1.58%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-8.914e-03	1.0000	31.0	0.15%	121.0	0.24%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-8.661e-03	1.0000	51.0	0.26%	181.7	0.37%
NAP(NAC)/col-NAP-DAP-Seq(GSE60143)/Homer	ARGTTACGTRTN	1e0	-8.336e-03	1.0000	792.0	3.96%	2169.9	4.36%
Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer	TCACGTGAYH	1e0	-7.253e-03	1.0000	321.0	1.60%	931.9	1.87%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-6.715e-03	1.0000	100.0	0.50%	327.0	0.66%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-6.526e-03	1.0000	208.0	1.04%	627.2	1.26%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-6.509e-03	1.0000	895.0	4.47%	2445.9	4.91%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-5.975e-03	1.0000	2383.0	11.92%	6272.8	12.60%
TINY(AP2EREBP)/col-TINY-DAP-Seq(GSE60143)/Homer	NNCACCGACA	1e0	-5.881e-03	1.0000	138.0	0.69%	435.6	0.88%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-5.682e-03	1.0000	15.0	0.07%	71.4	0.14%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-5.632e-03	1.0000	6714.0	33.57%	17205.8	34.57%
TGA5(bZIP)/col-TGA5-DAP-Seq(GSE60143)/Homer	NNGATGACGTCATCN	1e0	-5.542e-03	1.0000	77.0	0.39%	262.6	0.53%
DEAR2(AP2EREBP)/colamp-DEAR2-DAP-Seq(GSE60143)/Homer	HCACCGACAWHD	1e0	-5.345e-03	1.0000	731.0	3.65%	2023.2	4.07%
bZIP44(bZIP)/colamp-bZIP44-DAP-Seq(GSE60143)/Homer	NDTGCCACGTCAGCH	1e0	-5.230e-03	1.0000	14.0	0.07%	68.1	0.14%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-5.229e-03	1.0000	1189.0	5.95%	3215.8	6.46%
bZIP16(bZIP)/colamp-bZIP16-DAP-Seq(GSE60143)/Homer	TGCCACGTGD	1e0	-4.939e-03	1.0000	222.0	1.11%	670.5	1.35%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-4.554e-03	1.0000	690.0	3.45%	1920.4	3.86%
O2(bZIP)/Corn-O2-ChIP-Seq(GSE63991)/Homer	GCTGACGTGGCA	1e0	-4.545e-03	1.0000	130.0	0.65%	416.9	0.84%
bZIP68(bZIP)/col-bZIP68-DAP-Seq(GSE60143)/Homer	WGCCACGTGK	1e0	-4.506e-03	1.0000	296.0	1.48%	873.5	1.76%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-4.462e-03	1.0000	65.0	0.33%	229.1	0.46%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-4.131e-03	1.0000	167.0	0.83%	521.6	1.05%
At1g36060(AP2EREBP)/colamp-At1g36060-DAP-Seq(GSE60143)/Homer	NNWWKGTCGGTG	1e0	-4.073e-03	1.0000	427.0	2.14%	1227.5	2.47%
At2g44940(AP2EREBP)/colamp-At2g44940-DAP-Seq(GSE60143)/Homer	NYACCGACAHNNNNN	1e0	-3.951e-03	1.0000	110.0	0.55%	361.6	0.73%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-3.770e-03	1.0000	154.0	0.77%	486.7	0.98%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-3.569e-03	1.0000	49.0	0.24%	183.8	0.37%
ABF2(bZIP)/col-ABF2-DAP-Seq(GSE60143)/Homer	KGMCACGTGDCMHHH	1e0	-3.359e-03	1.0000	181.0	0.91%	563.1	1.13%
NLP7(RWPRK)/col-NLP7-DAP-Seq(GSE60143)/Homer	TGRCCYTTCR	1e0	-3.356e-03	1.0000	2920.0	14.60%	7669.0	15.41%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-3.301e-03	1.0000	1524.0	7.62%	4097.6	8.23%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-3.260e-03	1.0000	454.0	2.27%	1304.3	2.62%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-2.799e-03	1.0000	1347.0	6.73%	3646.4	7.33%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-2.741e-03	1.0000	1002.0	5.01%	2751.1	5.53%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-2.663e-03	1.0000	65.0	0.33%	234.7	0.47%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-2.663e-03	1.0000	65.0	0.33%	234.7	0.47%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-2.638e-03	1.0000	1627.0	8.13%	4371.2	8.78%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e0	-2.575e-03	1.0000	799.0	4.00%	2223.0	4.47%
At5g65130(AP2EREBP)/colamp-At5g65130-DAP-Seq(GSE60143)/Homer	CCRCCGACAWTN	1e0	-2.546e-03	1.0000	133.0	0.66%	432.2	0.87%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-2.457e-03	1.0000	342.0	1.71%	1009.9	2.03%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-2.230e-03	1.0000	86.0	0.43%	298.3	0.60%
ATAF1(NAC)/col-ATAF1-DAP-Seq(GSE60143)/Homer	YACGTMAY	1e0	-2.191e-03	1.0000	2544.0	12.72%	6730.2	13.52%
bHLH10(bHLH)/colamp-bHLH10-DAP-Seq(GSE60143)/Homer	YACCGACA	1e0	-2.077e-03	1.0000	149.0	0.74%	480.9	0.97%
ERF38(AP2EREBP)/col-ERF38-DAP-Seq(GSE60143)/Homer	CACCGACA	1e0	-1.752e-03	1.0000	258.0	1.29%	786.5	1.58%
NAM(NAC)/col-NAM-DAP-Seq(GSE60143)/Homer	RGTTRCGTRW	1e0	-1.710e-03	1.0000	1003.0	5.01%	2768.5	5.56%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-1.428e-03	1.0000	6728.0	33.64%	17329.1	34.82%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-1.311e-03	1.0000	3053.0	15.27%	8052.3	16.18%
AREB3(bZIP)/col-AREB3-DAP-Seq(GSE60143)/Homer	NKGMCACGTGDCMNN	1e0	-1.228e-03	1.0000	257.0	1.29%	789.2	1.59%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-1.194e-03	1.0000	1887.0	9.44%	5071.6	10.19%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-1.139e-03	1.0000	28.0	0.14%	125.6	0.25%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-1.089e-03	1.0000	320.0	1.60%	964.2	1.94%
SeqBias: CA-repeat	CACACACACA	1e0	-1.014e-03	1.0000	8498.0	42.49%	21780.3	43.77%
ABI5(bZIP)/col-ABI5-DAP-Seq(GSE60143)/Homer	GCCACGTG	1e0	-9.510e-04	1.0000	351.0	1.75%	1051.6	2.11%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-9.210e-04	1.0000	1794.0	8.97%	4841.5	9.73%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-8.950e-04	1.0000	458.0	2.29%	1343.0	2.70%
bZIP53(bZIP)/colamp-bZIP53-DAP-Seq(GSE60143)/Homer	NDNHSACGTGKMNNN	1e0	-8.050e-04	1.0000	251.0	1.26%	779.9	1.57%
E-box/Arabidopsis-Promoters/Homer	GCCACGTG	1e0	-7.780e-04	1.0000	454.0	2.27%	1334.4	2.68%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-7.550e-04	1.0000	2062.0	10.31%	5540.0	11.13%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-7.100e-04	1.0000	596.0	2.98%	1717.1	3.45%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-6.960e-04	1.0000	770.0	3.85%	2180.7	4.38%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-5.930e-04	1.0000	1548.0	7.74%	4220.2	8.48%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	-5.760e-04	1.0000	27.0	0.14%	126.4	0.25%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-5.060e-04	1.0000	2396.0	11.98%	6413.7	12.89%
AT3G60490(AP2EREBP)/colamp-AT3G60490-DAP-Seq(GSE60143)/Homer	NNRCCGACANNNNNN	1e0	-4.320e-04	1.0000	135.0	0.68%	459.3	0.92%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-4.310e-04	1.0000	169.0	0.84%	557.1	1.12%
AT3G16280(AP2EREBP)/colamp-AT3G16280-DAP-Seq(GSE60143)/Homer	HCACCGACAHHDHHN	1e0	-3.790e-04	1.0000	166.0	0.83%	550.1	1.11%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-3.420e-04	1.0000	450.0	2.25%	1339.7	2.69%
GBF6(bZIP)/colamp-GBF6-DAP-Seq(GSE60143)/Homer	WWTGMCACGTCABCW	1e0	-3.240e-04	1.0000	173.0	0.86%	572.4	1.15%
bZIP28(bZIP)/col-bZIP28-DAP-Seq(GSE60143)/Homer	TGCCACGTSABH	1e0	-3.130e-04	1.0000	214.0	1.07%	689.9	1.39%
CBF2(AP2EREBP)/colamp-CBF2-DAP-Seq(GSE60143)/Homer	YBRCCGACATNNNNN	1e0	-2.570e-04	1.0000	240.0	1.20%	765.9	1.54%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-1.730e-04	1.0000	870.0	4.35%	2479.3	4.98%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.700e-04	1.0000	438.0	2.19%	1319.8	2.65%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-1.520e-04	1.0000	646.0	3.23%	1884.5	3.79%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-1.340e-04	1.0000	412.0	2.06%	1252.6	2.52%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-1.200e-04	1.0000	3177.0	15.88%	8472.6	17.03%
bZIP50(bZIP)/colamp-bZIP50-DAP-Seq(GSE60143)/Homer	GATGACGTCA	1e0	-1.170e-04	1.0000	963.0	4.81%	2735.8	5.50%
TGA3(bZIP)/colamp-TGA3-DAP-Seq(GSE60143)/Homer	WTGATGACGTCATCW	1e0	-1.140e-04	1.0000	42.0	0.21%	188.0	0.38%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e0	-1.080e-04	1.0000	2136.0	10.68%	5800.3	11.66%
HY5(bZIP)/colamp-HY5-DAP-Seq(GSE60143)/Homer	RRTSACGTSD	1e0	-1.080e-04	1.0000	669.0	3.35%	1953.8	3.93%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-9.200e-05	1.0000	1050.0	5.25%	2971.7	5.97%
TGA4(bZIP)/colamp-TGA4-DAP-Seq(GSE60143)/Homer	RTGACGTCAKCW	1e0	-9.000e-05	1.0000	229.0	1.15%	748.4	1.50%
PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer	KTGTTTGC	1e0	-7.300e-05	1.0000	5072.0	25.36%	13314.7	26.76%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	-7.100e-05	1.0000	8.0	0.04%	65.7	0.13%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-7.000e-05	1.0000	2574.0	12.87%	6945.5	13.96%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e0	-6.700e-05	1.0000	1920.0	9.60%	5256.8	10.56%
DDF1(AP2EREBP)/col-DDF1-DAP-Seq(GSE60143)/Homer	GCCGACAT	1e0	-6.300e-05	1.0000	212.0	1.06%	704.6	1.42%
dHNF4(NR)/Fly-HNF4-ChIP-Seq(GSE73675)/Homer	GGTCCAAAGTCCAMT	1e0	-5.700e-05	1.0000	91.0	0.46%	348.6	0.70%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-4.600e-05	1.0000	1402.0	7.01%	3916.5	7.87%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-4.600e-05	1.0000	1913.0	9.56%	5250.3	10.55%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-3.800e-05	1.0000	2474.0	12.37%	6709.3	13.48%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-3.400e-05	1.0000	2303.0	11.52%	6271.8	12.60%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-3.300e-05	1.0000	2904.0	14.52%	7821.3	15.72%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-2.600e-05	1.0000	2870.0	14.35%	7742.7	15.56%
TGA10(bZIP)/colamp-TGA10-DAP-Seq(GSE60143)/Homer	ATGACGTC	1e0	-1.900e-05	1.0000	535.0	2.67%	1623.9	3.26%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-1.600e-05	1.0000	60.0	0.30%	260.3	0.52%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-1.500e-05	1.0000	952.0	4.76%	2753.8	5.53%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-1.200e-05	1.0000	3503.0	17.52%	9395.7	18.88%
SeqBias: CG bias	SSSSSSSSSS	1e0	-1.200e-05	1.0000	13721.0	68.61%	34949.7	70.23%
TGA1(bZIP)/colamp-TGA1-DAP-Seq(GSE60143)/Homer	TGACGTCAKC	1e0	-9.000e-06	1.0000	378.0	1.89%	1200.1	2.41%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-8.000e-06	1.0000	89.0	0.45%	358.8	0.72%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e0	-7.000e-06	1.0000	2073.0	10.37%	5724.2	11.50%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-4.000e-06	1.0000	263.0	1.31%	885.9	1.78%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	-3.000e-06	1.0000	2198.0	10.99%	6073.0	12.20%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-3.000e-06	1.0000	3911.0	19.55%	10489.7	21.08%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	-2.000e-06	1.0000	1478.0	7.39%	4197.2	8.43%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-2.000e-06	1.0000	1494.0	7.47%	4240.8	8.52%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-1.000e-06	1.0000	1345.0	6.73%	3856.3	7.75%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-1.000e-06	1.0000	796.0	3.98%	2394.2	4.81%
TGA6(bZIP)/colamp-TGA6-DAP-Seq(GSE60143)/Homer	TGACGTCABC	1e0	-1.000e-06	1.0000	504.0	2.52%	1591.8	3.20%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-1.000e-06	1.0000	1183.0	5.92%	3443.7	6.92%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e0	-0.000e+00	1.0000	2052.0	10.26%	5744.7	11.54%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	-0.000e+00	1.0000	656.0	3.28%	2026.6	4.07%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-0.000e+00	1.0000	552.0	2.76%	1747.7	3.51%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e0	-0.000e+00	1.0000	1474.0	7.37%	4253.2	8.55%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-0.000e+00	1.0000	1551.0	7.75%	4459.4	8.96%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-0.000e+00	1.0000	1756.0	8.78%	5020.4	10.09%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-0.000e+00	1.0000	85.0	0.43%	384.9	0.77%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-0.000e+00	1.0000	829.0	4.15%	2536.4	5.10%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	-0.000e+00	1.0000	1350.0	6.75%	3947.8	7.93%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-0.000e+00	1.0000	1157.0	5.79%	3487.3	7.01%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-0.000e+00	1.0000	749.0	3.74%	2370.1	4.76%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-0.000e+00	1.0000	780.0	3.90%	2521.8	5.07%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	-0.000e+00	1.0000	243.0	1.21%	955.3	1.92%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	-0.000e+00	1.0000	186.0	0.93%	760.7	1.53%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	-0.000e+00	1.0000	2115.0	10.57%	6161.7	12.38%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-0.000e+00	1.0000	418.0	2.09%	1471.2	2.96%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-0.000e+00	1.0000	691.0	3.45%	2301.1	4.62%
AT4G12670(MYBrelated)/col-AT4G12670-DAP-Seq(GSE60143)/Homer	AGGGTTTAGGGTTTA	1e0	-0.000e+00	1.0000	0.0	0.00%	1.6	0.00%
 Ik-1	NHTTGGGAATRCC	1e0	0.000e+00	1.0000	20000.0	100.00%	49764.7	100.00%