Homer de novo Motif Results (HepG2_minP_negatives_20kVs50k_output//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 20000
Total background sequences = 48958
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G T C T A G C C T A G G A C T A C T G A T C G A C G T T C A G G T A C C A G T C T A G T C G A 1e-211-4.861e+022.83%0.18%35.7bp (39.8bp)REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer(0.785)
More Information | Similar Motifs Found		motif file (matrix)
2 G C T A A G T C A T G C T G C A C A G T T C A G A C T G C T G A T A G C C G T A A C T G G A T C 1e-132-3.062e+021.71%0.09%38.0bp (41.6bp)REST/MA0138.2/Jaspar(0.810)
More Information | Similar Motifs Found		motif file (matrix)
3 A C T G G T C A C T A G C A G T T A C G A C T G G T A C C T A G A T G C G C A T T A C G A C G T 1e-27-6.302e+010.29%0.01%35.2bp (45.3bp)brk/dmmpmm(Bergman)/fly(0.698)
More Information | Similar Motifs Found		motif file (matrix)
4 G A T C C T G A T C A G T A G C C G T A A G T C G A T C G T A C G C T A A C T G A T G C G T A C 1e-26-6.105e+011.39%0.55%39.4bp (38.5bp)AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast(0.711)
More Information | Similar Motifs Found		motif file (matrix)
5 A C T G A T G C C A G T A T G C G A C T G A T C T G A C C A T G 1e-20-4.737e+0115.94%13.18%39.3bp (41.1bp)PDR8/MA0354.1/Jaspar(0.789)
More Information | Similar Motifs Found		motif file (matrix)
6 A T G C A C T G A T G C A C T G C T A G G C A T A C G T A T G C A C T G A G T C 1e-18-4.174e+010.28%0.03%38.0bp (38.8bp)OPI1(MacIsaac)/Yeast(0.730)
More Information | Similar Motifs Found		motif file (matrix)
7 C T A G T A C G A G T C C G A T C A T G C G T A C T G A T C A G C T G A C T G A T C A G C T G A 1e-17-4.120e+010.27%0.02%31.3bp (37.7bp)PABPN1(RRM)/Homo_sapiens-RNCMPT00157-PBM/HughesRNA(0.721)
More Information | Similar Motifs Found		motif file (matrix)
8 T C A G T C A G T A G C C G T A T G A C G T A C A T G C C A T G 1e-17-4.104e+0120.42%17.57%39.3bp (40.3bp)AFT2(MacIsaac)/Yeast(0.858)
More Information | Similar Motifs Found		motif file (matrix)
9 A C T G C A G T G A C T A T C G A G T C A G T C C G T A C G A T T C A G A T C G 1e-16-3.731e+011.50%0.79%39.2bp (38.3bp)Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.908)
More Information | Similar Motifs Found		motif file (matrix)
10 A G T C A C G T A C T G C T G A T G A C C T A G A T G C A G T C A G C T A C G T G A T C C A T G 1e-15-3.488e+010.18%0.01%39.3bp (41.3bp)CELF2(RRM)/JSL1-CELF2-CLIP-Seq(GSE71264)/Homer(0.655)
More Information | Similar Motifs Found		motif file (matrix)
11 T G A C A G C T C G T A C T G A T A C G T A C G T G C A A C G T 1e-15-3.473e+0121.83%19.15%39.8bp (41.4bp)G3BP2(RRM)/Homo_sapiens-RNCMPT00021-PBM/HughesRNA(0.770)
More Information | Similar Motifs Found		motif file (matrix)
12 A C G T T A G C A T G C A T C G A C T G T G A C A C T G A T C G T A G C A C T G T C G A A T C G 1e-14-3.414e+010.22%0.02%36.4bp (44.9bp)Os05g0497200/MA1034.1/Jaspar(0.778)
More Information | Similar Motifs Found		motif file (matrix)
13 A G C T G C A T C T A G A C T G T A C G C T G A G C T A G C T A T A C G A C T G C T G A A G T C 1e-14-3.250e+010.24%0.03%40.5bp (29.1bp)PCBP1(KH)/Mus_musculus-RNCMPT00239-PBM/HughesRNA(0.736)
More Information | Similar Motifs Found		motif file (matrix)
14 A C G T A G T C G T A C G A C T A C G T A C G T G C T A A C G T A G C T A C G T A C T G A C T G 1e-13-3.162e+010.23%0.03%42.1bp (26.6bp)PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer(0.705)
More Information | Similar Motifs Found		motif file (matrix)
15 C A T G T G C A C T G A T G C A C A T G T A C G G A T C A C T G A G C T C G A T 1e-13-3.055e+010.28%0.05%39.5bp (35.3bp)PB0136.1_IRC900814_2/Jaspar(0.636)
More Information | Similar Motifs Found		motif file (matrix)
16 C G T A A C T G A C T G A C G T A C T G A C G T C G T A A C G T C T G A A C G T A C T G A G T C 1e-13-3.022e+010.20%0.02%39.4bp (38.9bp)ID4/MA0824.1/Jaspar(0.663)
More Information | Similar Motifs Found		motif file (matrix)
17 T A G C G A C T A C G T T G C A A C T G C A T G A C T G G A T C A C G T G A T C 1e-12-2.894e+010.36%0.09%35.5bp (33.9bp)TBF1/MA0403.1/Jaspar(0.790)
More Information | Similar Motifs Found		motif file (matrix)
18 G A T C G C T A C G T A T A G C C A G T A C T G T A G C C G A T C T A G C G T A A C T G A T C G 1e-12-2.887e+010.21%0.03%35.0bp (30.4bp)PB0150.1_Mybl1_2/Jaspar(0.714)
More Information | Similar Motifs Found		motif file (matrix)
19 C T A G T C G A C T G A A C T G C T G A G C A T T A C G A G T C 1e-12-2.881e+013.37%2.38%41.2bp (41.8bp)At3g24120(G2like)/col-At3g24120-DAP-Seq(GSE60143)/Homer(0.765)
More Information | Similar Motifs Found		motif file (matrix)
20 A G T C C G T A A C T G A G T C G T A C C G T A A G T C A G T C C G T A A G T C G T A C A C T G 1e-12-2.837e+010.18%0.02%33.4bp (30.3bp)ZBTB7C/MA0695.1/Jaspar(0.755)
More Information | Similar Motifs Found		motif file (matrix)
21 G T A C G C T A A G T C G A C T A G T C T A C G A G C T G T C A A G C T A G T C 1e-12-2.810e+011.30%0.72%39.5bp (41.0bp)RBM3(RRM)/Homo_sapiens-RNCMPT00050-PBM/HughesRNA(0.787)
More Information | Similar Motifs Found		motif file (matrix)
22 * A G T C A G T C A C T G A G T C A C G T A T C G A C T G C G T A C T A G A C T G 1e-11-2.704e+010.26%0.05%37.0bp (41.7bp)XBP1(MacIsaac)/Yeast(0.713)
More Information | Similar Motifs Found		motif file (matrix)
23 * G A C T A G C T A G T C G A T C G C T A C G A T C A G T C T A G G T C A G A C T G T A C G T C A 1e-11-2.692e+010.14%0.01%33.9bp (32.5bp)MOD(RRM)/Drosophila_melanogaster-RNCMPT00140-PBM/HughesRNA(0.715)
More Information | Similar Motifs Found		motif file (matrix)
24 * A C T G C G T A C G T A A C G T A G C T G T A C G T A C A G T C T A G C C G A T 1e-11-2.535e+010.42%0.14%41.0bp (37.1bp)dl-B/dmmpmm(Bergman)/fly(0.792)
More Information | Similar Motifs Found		motif file (matrix)
25 * A C T G A C T G C G T A A C T G A G T C A G T C G T A C A C T G A T G C A C G T 1e-10-2.428e+010.33%0.09%36.5bp (38.3bp)POL013.1_MED-1/Jaspar(0.701)
More Information | Similar Motifs Found		motif file (matrix)
26 * A C G T A G T C C G T A A C T G A G C T A C T G A T C G A G T C C G T A A G T C C G T A C G T A 1e-10-2.374e+010.10%0.00%32.2bp (0.0bp)SUM1/SUM1_YPD/16-SUM1(Harbison)/Yeast(0.635)
More Information | Similar Motifs Found		motif file (matrix)
27 * A G T C A G T C C T G A C G T A A C T G G C T A A C T G A C G T A T G C A C T G 1e-10-2.370e+010.27%0.06%39.0bp (38.6bp)PB0140.1_Irf6_2/Jaspar(0.719)
More Information | Similar Motifs Found		motif file (matrix)
28 * A T G C T C A G A G T C T A C G C A T G C G T A C T G A A T C G C T G A A G C T 1e-10-2.362e+010.15%0.01%39.9bp (23.0bp)RGT1/Literature(Harbison)/Yeast(0.789)
More Information | Similar Motifs Found		motif file (matrix)
29 * A C G T A C T G G A T C A C G T A C T G C G T A A C G T A C G T C G T A A C T G 1e-10-2.342e+010.23%0.05%37.8bp (39.5bp)ATHB34(ZFHD)/colamp-ATHB34-DAP-Seq(GSE60143)/Homer(0.766)
More Information | Similar Motifs Found		motif file (matrix)
30 * C T G A A C G T A C G T A C G T C G T A A T G C A G T C A C T G 1e-10-2.316e+010.41%0.14%41.4bp (43.0bp)GTL1(Trihelix)/colamp-GTL1-DAP-Seq(GSE60143)/Homer(0.840)
More Information | Similar Motifs Found		motif file (matrix)
31 * A C G T A C T G A G T C A C G T A G T C A T G C A C T G A C T G A G T C G T A C A C T G A C G T 1e-9-2.298e+010.12%0.01%32.8bp (47.0bp)RDS1/MA0361.1/Jaspar(0.671)
More Information | Similar Motifs Found		motif file (matrix)
32 * A G T C A C T G A C T G A C G T C G T A A C G T A C G T C G T A 1e-9-2.135e+010.12%0.01%34.7bp (34.9bp)STB5/MA0392.1/Jaspar(0.820)
More Information | Similar Motifs Found		motif file (matrix)
33 * A C G T A G T C A C T G C G A T A C T G C G T A A C G T A C T G A C G T A C T G 1e-8-1.959e+010.10%0.01%37.9bp (20.1bp)Unknown2/Drosophila-Promoters/Homer(0.684)
More Information | Similar Motifs Found		motif file (matrix)
34 * A C G T C G T A G C T A A G T C A C G T C G T A A C G T A G T C C G T A G T C A 1e-8-1.959e+010.10%0.01%37.6bp (23.8bp)FZF1/MA0298.1/Jaspar(0.828)
More Information | Similar Motifs Found		motif file (matrix)
35 * C T G A C G T A G T C A A G T C A C G T A C T G A C G T A G T C 1e-8-1.873e+011.96%1.36%38.3bp (41.3bp)Myb/MA0100.2/Jaspar(0.820)
More Information | Similar Motifs Found		motif file (matrix)
36 * A G T C A G T C A C T G A G C T A C T G A C G T C G T A A C G T 1e-6-1.552e+010.29%0.11%39.2bp (32.5bp)Lm_0223(RRM)/Leishmania_major-RNCMPT00223-PBM/HughesRNA(0.746)
More Information | Similar Motifs Found		motif file (matrix)
37 * C G T A A C T G C G T A G T A C C G T A A G T C T G C A A G T C 1e-6-1.543e+013.23%2.52%39.0bp (40.4bp)Nv_0278(RRM)/Nematostella_vectensis-RNCMPT00278-PBM/HughesRNA(0.812)
More Information | Similar Motifs Found		motif file (matrix)
38 * A G T C A C T G A G T C C G T A A C G T C G T A A C T G C T A G 1e-6-1.470e+010.42%0.20%39.7bp (45.0bp)CG7903(RRM)/Drosophila_melanogaster-RNCMPT00144-PBM/HughesRNA(0.713)
More Information | Similar Motifs Found		motif file (matrix)
39 * A G T C C T G A G C A T A C G T G T A C A C T G C G T A C G T A 1e-4-1.139e+010.90%0.60%40.8bp (42.4bp)YER051W(MacIsaac)/Yeast(0.836)
More Information | Similar Motifs Found		motif file (matrix)
40 * A G T C A C T G A C G T A G T C A C T G C G T A A G T C A G T C 1e-4-1.084e+010.07%0.01%32.5bp (36.1bp)WRKY12/MA1075.1/Jaspar(0.801)
More Information | Similar Motifs Found		motif file (matrix)
41 * A G T C A C T G C G T A A C G T A G T C A C G T C G T A A C T G 1e-4-1.069e+010.08%0.01%35.4bp (26.3bp)GATA9/MA1018.1/Jaspar(0.764)
More Information | Similar Motifs Found		motif file (matrix)
42 * C G T A A G T C A C T G A G T C A G T C A G T C A C G T C G T A 1e-4-1.010e+010.15%0.05%38.2bp (37.5bp)PB0143.1_Klf7_2/Jaspar(0.821)
More Information | Similar Motifs Found		motif file (matrix)