Homer de novo Motif Results (HepG2-K562_minP_PosVsPos_20kVs20k_output//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 20000
Total background sequences = 19917
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T A G C A G T G A C T G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C G C T A 1e-135-3.112e+029.28%3.35%36.4bp (39.5bp)HNF4G/MA0484.1/Jaspar(0.959)
More Information | Similar Motifs Found		motif file (matrix)
2 G C A T A C T G A G T C G T A C A G T C C T G A C T A G C T A G G T A C G C T A C G A T A C T G 1e-74-1.705e+023.57%0.94%36.4bp (38.5bp)p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer(0.922)
More Information | Similar Motifs Found		motif file (matrix)
3 A G T C G T A C G T C A C T G A C T A G A C T G G A C T G C A T 1e-44-1.034e+0213.66%9.17%39.3bp (41.5bp)Pp_0206(RRM)/Physcomitrella_patens-RNCMPT00206-PBM/HughesRNA(0.839)
More Information | Similar Motifs Found		motif file (matrix)
4 C A T G A C G T G C A T G C T A T C G A G C A T T G C A C G T A C A G T G C A T C G T A G C T A 1e-43-9.944e+013.13%1.16%39.3bp (39.2bp)HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer(0.962)
More Information | Similar Motifs Found		motif file (matrix)
5 C A T G C A T G T C G A G C T A C G A T C G A T A C G T A C G T A G T C G T A C G C T A A G T C 1e-38-8.913e+014.58%2.23%39.9bp (41.6bp)NFAT5/MA0606.1/Jaspar(0.865)
More Information | Similar Motifs Found		motif file (matrix)
6 A G C T G C T A C G T A C T G A G A T C T G C A A C T G C G A T 1e-36-8.420e+0123.03%17.90%39.2bp (42.4bp)FOXL1/MA0033.2/Jaspar(0.887)
More Information | Similar Motifs Found		motif file (matrix)
7 A C T G C T G A G A T C C G T A A C T G A T G C C G A T C A T G A C G T T C A G A G C T G A T C 1e-24-5.676e+010.58%0.05%37.0bp (20.7bp)PL0003.1_hlh-2::cnd-1/Jaspar(0.743)
More Information | Similar Motifs Found		motif file (matrix)
8 A C G T G A T C G C A T C T G A A G T C C G T A A C G T A C T G C G A T G A T C 1e-24-5.613e+010.60%0.05%35.2bp (40.4bp)PH0086.1_Irx5/Jaspar(0.710)
More Information | Similar Motifs Found		motif file (matrix)
9 A G T C A G T C C G A T A C T G A C G T A T C G G T A C G T C A T A G C A T G C A C G T A C G T 1e-24-5.536e+010.69%0.09%33.6bp (35.1bp)POL009.1_DCE_S_II/Jaspar(0.636)
More Information | Similar Motifs Found		motif file (matrix)
10 A G T C A T G C A G T C A C G T T C A G A G T C C G A T A C G T A G T C C G A T C G A T A C T G 1e-22-5.260e+010.38%0.00%34.6bp (0.0bp)TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA(0.643)
More Information | Similar Motifs Found		motif file (matrix)
11 A C G T A C G T C G T A A G C T C T G A A G C T C T G A C G T A A T G C G C T A 1e-21-4.905e+012.99%1.57%38.1bp (39.9bp)HLF/MA0043.2/Jaspar(0.908)
More Information | Similar Motifs Found		motif file (matrix)
12 A G C T A C G T T A C G G T A C A G T C G C A T T G A C C G T A A C T G G T C A A G T C C G T A 1e-20-4.765e+010.46%0.03%36.1bp (29.3bp)PB0190.1_Tcfap2b_2/Jaspar(0.651)
More Information | Similar Motifs Found		motif file (matrix)
13 A G C T A C G T C A T G C G A T C T A G A G C T A C G T A C T G T C G A G T A C G A C T A C G T 1e-20-4.680e+011.11%0.34%35.0bp (44.2bp)RAV1(RAV)/colamp-RAV1-DAP-Seq(GSE60143)/Homer(0.745)
More Information | Similar Motifs Found		motif file (matrix)
14 C T A G A G T C C T G A C G A T C G A T A G T C A G T C C G T A 1e-19-4.457e+014.45%2.75%36.1bp (40.6bp)TEAD3/MA0808.1/Jaspar(0.942)
More Information | Similar Motifs Found		motif file (matrix)
15 A G C T A C G T C G T A A G T C G T A C G T A C G C T A A C G T C T G A C A G T 1e-18-4.297e+011.29%0.47%38.8bp (38.1bp)Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.736)
More Information | Similar Motifs Found		motif file (matrix)
16 A C G T A G C T G A T C G C A T A C T G T G C A G T A C G A C T G C A T C A T G T A G C A G T C 1e-18-4.274e+010.41%0.03%33.3bp (16.9bp)bZIP42(bZIP)/colamp-bZIP42-DAP-Seq(GSE60143)/Homer(0.689)
More Information | Similar Motifs Found		motif file (matrix)
17 G A T C T C A G A T C G A C T G A C G T C G T A G T A C C G T A 1e-18-4.157e+017.65%5.47%39.8bp (43.8bp)GTL1(Trihelix)/colamp-GTL1-DAP-Seq(GSE60143)/Homer(0.769)
More Information | Similar Motifs Found		motif file (matrix)
18 A C G T A G T C A G T C A G C T C G T A A G C T A C G T A C T G A G C T A G C T A G T C C G A T 1e-17-4.063e+010.34%0.01%32.7bp (3.0bp)ROX1/MA0371.1/Jaspar(0.795)
More Information | Similar Motifs Found		motif file (matrix)
19 A G T C C G T A A T G C G T A C A G T C A C G T A C G T A C T G A G T C C G T A A C G T G T C A 1e-17-4.011e+010.32%0.01%33.5bp (0.0bp)RAP1/RAP1_YPD/85-RAP1(Harbison)/Yeast(0.712)
More Information | Similar Motifs Found		motif file (matrix)
20 A C G T A T C G A G T C C G A T A C T G C G T A A C G T C T G A C G A T C T A G A C T G A C T G 1e-17-3.949e+010.41%0.04%30.0bp (32.7bp)MAFK/MA0496.1/Jaspar(0.661)
More Information | Similar Motifs Found		motif file (matrix)
21 T A C G A C G T G T A C A C T G A G T C A C G T A G T C G C A T A C T G A T C G 1e-16-3.737e+010.85%0.25%35.8bp (34.7bp)CG14718(RRM)/Drosophila_melanogaster-RNCMPT00006-PBM/HughesRNA(0.656)
More Information | Similar Motifs Found		motif file (matrix)
22 C A T G A G C T A C G T C T A G C T A G T G C A G A C T G T A C G C T A C T A G A G T C G A C T 1e-16-3.713e+010.41%0.04%34.6bp (31.1bp)PL0001.1_hlh-11/Jaspar(0.685)
More Information | Similar Motifs Found		motif file (matrix)
23 G A T C C A G T G A C T C A G T A C T G C A T G T G A C G C T A C G A T C G A T A G T C G T C A 1e-15-3.598e+010.26%0.00%29.7bp (0.0bp)NFIA/MA0670.1/Jaspar(0.678)
More Information | Similar Motifs Found		motif file (matrix)
24 C T G A G T C A A C T G C T A G C G T A A C T G A C G T A C T G G T C A A G T C 1e-15-3.555e+010.32%0.02%34.0bp (29.3bp)TBX15/MA0803.1/Jaspar(0.791)
More Information | Similar Motifs Found		motif file (matrix)
25 T G A C C G A T C G A T G A T C T C G A C T G A C G T A A C T G C G T A A C T G 1e-15-3.503e+013.91%2.50%38.0bp (41.3bp)Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer(0.801)
More Information | Similar Motifs Found		motif file (matrix)
26 G C T A A T C G T G C A T A C G G C T A A C T G A G T C G A C T 1e-14-3.394e+0128.59%25.09%40.4bp (39.8bp)POL013.1_MED-1/Jaspar(0.663)
More Information | Similar Motifs Found		motif file (matrix)
27 T A C G C A T G C G A T C G T A C G T A C A T G G C A T A C T G C T A G A C T G G C A T C A T G 1e-14-3.340e+010.36%0.04%39.0bp (34.7bp)Nkx3-1/MA0124.2/Jaspar(0.720)
More Information | Similar Motifs Found		motif file (matrix)
28 G T A C G T C A G T A C G C T A A C T G A G C T A G T C G T A C C A T G T G A C C G T A C T G A 1e-14-3.336e+010.27%0.01%34.6bp (0.0bp)MAFK/MA0496.1/Jaspar(0.652)
More Information | Similar Motifs Found		motif file (matrix)
29 A C G T A C T G C G T A A G T C A G T C A C G T C G T A C G T A 1e-13-3.016e+011.31%0.59%39.7bp (39.4bp)THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer(0.852)
More Information | Similar Motifs Found		motif file (matrix)
30 G T C A A T C G C G T A A C G T A G T C C G T A A G T C A C T G 1e-12-2.935e+010.61%0.17%36.7bp (45.6bp)SNRNP70K(RRM)/Drosophila_melanogaster-RNCMPT00143-PBM/HughesRNA(0.808)
More Information | Similar Motifs Found		motif file (matrix)
31 C T A G A T G C G T A C G C A T C G A T C A T G C T A G G T A C C G A T A G T C 1e-12-2.921e+010.33%0.04%34.5bp (35.6bp)MAC1/Literature(Harbison)/Yeast(0.674)
More Information | Similar Motifs Found		motif file (matrix)
32 G T A C A G T C A C T G A T G C A C G T A C T G A C T G A G T C G T A C A C G T 1e-12-2.785e+010.30%0.03%33.4bp (26.9bp)Vts1p(SAM)/Saccharomyces_cerevisiae-RNCMPT00111-PBM/HughesRNA(0.798)
More Information | Similar Motifs Found		motif file (matrix)
33 * A C T G A T C G C A T G A T G C A G T C T G A C T A G C G T A C T G C A A G C T A C T G G T A C 1e-11-2.670e+010.43%0.09%39.1bp (45.4bp)opa/MA0456.1/Jaspar(0.680)
More Information | Similar Motifs Found		motif file (matrix)
34 * A C T G C T G A T C G A G T C A A G T C A C G T A C G T G T A C A C G T T A G C 1e-11-2.653e+010.28%0.03%37.6bp (47.9bp)HSF6(HSF)/col-HSF6-DAP-Seq(GSE60143)/Homer(0.787)
More Information | Similar Motifs Found		motif file (matrix)
35 * A C T G G A C T A C G T G A C T C A G T A C T G G C A T A G C T G A C T G A T C G C T A C G A T 1e-11-2.629e+010.53%0.14%33.4bp (38.0bp)ZC3H14(Znf)/Homo_sapiens-RNCMPT00086-PBM/HughesRNA(0.827)
More Information | Similar Motifs Found		motif file (matrix)
36 * A C T G C A T G T A C G A C T G G C A T C T A G C G A T C G T A 1e-10-2.423e+011.26%0.63%40.5bp (42.9bp)AFT2/MA0270.1/Jaspar(0.753)
More Information | Similar Motifs Found		motif file (matrix)
37 * A C G T A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C T G C G T A 1e-8-1.870e+010.32%0.07%36.6bp (5.9bp)Hand1::Tcf3/MA0092.1/Jaspar(0.689)
More Information | Similar Motifs Found		motif file (matrix)
38 * A C G T A G T C C T A G A G T C A T C G G C T A A C T G T C A G 1e-7-1.698e+013.99%3.00%37.8bp (35.0bp)ZBTB33/MA0527.1/Jaspar(0.842)
More Information | Similar Motifs Found		motif file (matrix)
39 * A T G C A T G C A T G C A C T G T C A G A T C G T G A C G T A C 1e-7-1.663e+019.09%7.62%38.0bp (37.6bp)SKN7(MacIsaac)/Yeast(0.888)
More Information | Similar Motifs Found		motif file (matrix)
40 * A C T G C G T A A C G T A C T G G T C A A C T G C G T A A C T G 1e-6-1.497e+010.69%0.34%43.9bp (45.1bp)Su(H)/dmmpmm(Bergman)/fly(0.780)
More Information | Similar Motifs Found		motif file (matrix)
41 * C G T A A G T C A C T G C G T A A C G T C G T A A G T C A G T C 1e-6-1.459e+010.60%0.27%40.8bp (42.6bp)PH0161.1_Six1/Jaspar(0.778)
More Information | Similar Motifs Found		motif file (matrix)
42 * A C G T A C G T A G T C A C T G A C G T A G T C A G T C C G T A 1e-5-1.380e+010.16%0.02%36.3bp (17.7bp)AT/dmmpmm(Papatsenko)/fly(0.734)
More Information | Similar Motifs Found		motif file (matrix)
43 * A C T G A T C G A T C G A C T G C T A G A C T G A C T G A C T G A C T G A C T G 1e-3-7.224e+001.41%1.06%34.7bp (35.1bp)SeqBias: polyC-repeat(0.996)
More Information | Similar Motifs Found		motif file (matrix)