python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py mSTARR_seq_human-DNA-BS-Rep1-SRX3302702/SRR6192705_1.fastq.gz,mSTARR_seq_human-DNA-BS-Rep1-SRX3302731/SRR6192676_1.fastq.gz,mSTARR_seq_human-DNA-BS-Rep1-SRX3302753/SRR6192654_1.fastq.gz,mSTARR_seq_human-DNA-BS-Rep1-SRX3302768/SRR6192639_1.fastq.gz mSTARR_seq_human-DNA-BS-Rep1-SRX3302702/SRR6192705_2.fastq.gz,mSTARR_seq_human-DNA-BS-Rep1-SRX3302731/SRR6192676_2.fastq.gz,mSTARR_seq_human-DNA-BS-Rep1-SRX3302753/SRR6192654_2.fastq.gz,mSTARR_seq_human-DNA-BS-Rep1-SRX3302768/SRR6192639_2.fastq.gz -trim 50 50 | /oak/stanford/groups/akundaje/marinovg/programs/bowtie-1.0.1+hamrhein_nh_patch/bowtie /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/hg38-male -p 20 -v 2 -k 2 -m 1 -t --best --strata -q --sam-nh -X 1000 --sam --12 - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools view -bT /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38.fa - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools sort - mSTARR_seq_human-DNA-BS-Rep1.2x50mers.hg38-male.unique
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py mSTARR_seq_human-DNA-BS-Rep2-SRX3302701/SRR6192706_1.fastq.gz,mSTARR_seq_human-DNA-BS-Rep2-SRX3302730/SRR6192677_1.fastq.gz,mSTARR_seq_human-DNA-BS-Rep2-SRX3302752/SRR6192655_1.fastq.gz,mSTARR_seq_human-DNA-BS-Rep2-SRX3302769/SRR6192638_1.fastq.gz mSTARR_seq_human-DNA-BS-Rep2-SRX3302701/SRR6192706_2.fastq.gz,mSTARR_seq_human-DNA-BS-Rep2-SRX3302730/SRR6192677_2.fastq.gz,mSTARR_seq_human-DNA-BS-Rep2-SRX3302752/SRR6192655_2.fastq.gz,mSTARR_seq_human-DNA-BS-Rep2-SRX3302769/SRR6192638_2.fastq.gz -trim 50 50 | /oak/stanford/groups/akundaje/marinovg/programs/bowtie-1.0.1+hamrhein_nh_patch/bowtie /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/hg38-male -p 20 -v 2 -k 2 -m 1 -t --best --strata -q --sam-nh -X 1000 --sam --12 - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools view -bT /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38.fa - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools sort - mSTARR_seq_human-DNA-BS-Rep2.2x50mers.hg38-male.unique
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py mSTARR_seq_human-DNA-BS-Rep3-SRX3302700/SRR6192707_1.fastq.gz,mSTARR_seq_human-DNA-BS-Rep3-SRX3302726/SRR6192681_1.fastq.gz,mSTARR_seq_human-DNA-BS-Rep3-SRX3302764/SRR6192643_1.fastq.gz,mSTARR_seq_human-DNA-BS-Rep3-SRX3302770/SRR6192637_1.fastq.gz mSTARR_seq_human-DNA-BS-Rep3-SRX3302700/SRR6192707_2.fastq.gz,mSTARR_seq_human-DNA-BS-Rep3-SRX3302726/SRR6192681_2.fastq.gz,mSTARR_seq_human-DNA-BS-Rep3-SRX3302764/SRR6192643_2.fastq.gz,mSTARR_seq_human-DNA-BS-Rep3-SRX3302770/SRR6192637_2.fastq.gz -trim 50 50 | /oak/stanford/groups/akundaje/marinovg/programs/bowtie-1.0.1+hamrhein_nh_patch/bowtie /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/hg38-male -p 20 -v 2 -k 2 -m 1 -t --best --strata -q --sam-nh -X 1000 --sam --12 - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools view -bT /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38.fa - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools sort - mSTARR_seq_human-DNA-BS-Rep3.2x50mers.hg38-male.unique
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py mSTARR_seq_human-DNA-BS-Rep4-SRX3302699/SRR6192708_1.fastq.gz,mSTARR_seq_human-DNA-BS-Rep4-SRX3302725/SRR6192682_1.fastq.gz,mSTARR_seq_human-DNA-BS-Rep4-SRX3302765/SRR6192642_1.fastq.gz,mSTARR_seq_human-DNA-BS-Rep4-SRX3302771/SRR6192636_1.fastq.gz mSTARR_seq_human-DNA-BS-Rep4-SRX3302699/SRR6192708_2.fastq.gz,mSTARR_seq_human-DNA-BS-Rep4-SRX3302725/SRR6192682_2.fastq.gz,mSTARR_seq_human-DNA-BS-Rep4-SRX3302765/SRR6192642_2.fastq.gz,mSTARR_seq_human-DNA-BS-Rep4-SRX3302771/SRR6192636_2.fastq.gz -trim 50 50 | /oak/stanford/groups/akundaje/marinovg/programs/bowtie-1.0.1+hamrhein_nh_patch/bowtie /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/hg38-male -p 20 -v 2 -k 2 -m 1 -t --best --strata -q --sam-nh -X 1000 --sam --12 - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools view -bT /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38.fa - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools sort - mSTARR_seq_human-DNA-BS-Rep4.2x50mers.hg38-male.unique
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py mSTARR_seq_human-DNA-BS-Rep5-SRX3302704/SRR6192703_1.fastq.gz,mSTARR_seq_human-DNA-BS-Rep5-SRX3302727/SRR6192680_1.fastq.gz,mSTARR_seq_human-DNA-BS-Rep5-SRX3302762/SRR6192645_1.fastq.gz,mSTARR_seq_human-DNA-BS-Rep5-SRX3302766/SRR6192641_1.fastq.gz mSTARR_seq_human-DNA-BS-Rep5-SRX3302704/SRR6192703_2.fastq.gz,mSTARR_seq_human-DNA-BS-Rep5-SRX3302727/SRR6192680_2.fastq.gz,mSTARR_seq_human-DNA-BS-Rep5-SRX3302762/SRR6192645_2.fastq.gz,mSTARR_seq_human-DNA-BS-Rep5-SRX3302766/SRR6192641_2.fastq.gz -trim 50 50 | /oak/stanford/groups/akundaje/marinovg/programs/bowtie-1.0.1+hamrhein_nh_patch/bowtie /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/hg38-male -p 20 -v 2 -k 2 -m 1 -t --best --strata -q --sam-nh -X 1000 --sam --12 - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools view -bT /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38.fa - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools sort - mSTARR_seq_human-DNA-BS-Rep5.2x50mers.hg38-male.unique
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py mSTARR_seq_human-DNA-BS-Rep6-SRX3302763/SRR6192644_1.fastq.gz,mSTARR_seq_human-DNA-BS-Rep6-SRX3302767/SRR6192640_1.fastq.gz mSTARR_seq_human-DNA-BS-Rep6-SRX3302763/SRR6192644_2.fastq.gz,mSTARR_seq_human-DNA-BS-Rep6-SRX3302767/SRR6192640_2.fastq.gz -trim 50 50 | /oak/stanford/groups/akundaje/marinovg/programs/bowtie-1.0.1+hamrhein_nh_patch/bowtie /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/hg38-male -p 20 -v 2 -k 2 -m 1 -t --best --strata -q --sam-nh -X 1000 --sam --12 - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools view -bT /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38.fa - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools sort - mSTARR_seq_human-DNA-BS-Rep6.2x50mers.hg38-male.unique
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py mSTARR_seq_human-DNA-Rep1-SRX3302711/SRR6192696_1.fastq.gz,mSTARR_seq_human-DNA-Rep1-SRX3302742/SRR6192665_1.fastq.gz mSTARR_seq_human-DNA-Rep1-SRX3302711/SRR6192696_2.fastq.gz,mSTARR_seq_human-DNA-Rep1-SRX3302742/SRR6192665_2.fastq.gz -trim 50 50 | /oak/stanford/groups/akundaje/marinovg/programs/bowtie-1.0.1+hamrhein_nh_patch/bowtie /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/hg38-male -p 20 -v 2 -k 2 -m 1 -t --best --strata -q --sam-nh -X 1000 --sam --12 - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools view -bT /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38.fa - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools sort - mSTARR_seq_human-DNA-Rep1.2x50mers.hg38-male.unique
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py mSTARR_seq_human-DNA-Rep2-SRX3302713/SRR6192694_1.fastq.gz,mSTARR_seq_human-DNA-Rep2-SRX3302748/SRR6192659_1.fastq.gz mSTARR_seq_human-DNA-Rep2-SRX3302713/SRR6192694_2.fastq.gz,mSTARR_seq_human-DNA-Rep2-SRX3302748/SRR6192659_2.fastq.gz -trim 50 50 | /oak/stanford/groups/akundaje/marinovg/programs/bowtie-1.0.1+hamrhein_nh_patch/bowtie /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/hg38-male -p 20 -v 2 -k 2 -m 1 -t --best --strata -q --sam-nh -X 1000 --sam --12 - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools view -bT /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38.fa - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools sort - mSTARR_seq_human-DNA-Rep2.2x50mers.hg38-male.unique
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py mSTARR_seq_human-DNA-Rep3-SRX3302707/SRR6192700_1.fastq.gz,mSTARR_seq_human-DNA-Rep3-SRX3302746/SRR6192661_1.fastq.gz mSTARR_seq_human-DNA-Rep3-SRX3302707/SRR6192700_2.fastq.gz,mSTARR_seq_human-DNA-Rep3-SRX3302746/SRR6192661_2.fastq.gz -trim 50 50 | /oak/stanford/groups/akundaje/marinovg/programs/bowtie-1.0.1+hamrhein_nh_patch/bowtie /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/hg38-male -p 20 -v 2 -k 2 -m 1 -t --best --strata -q --sam-nh -X 1000 --sam --12 - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools view -bT /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38.fa - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools sort - mSTARR_seq_human-DNA-Rep3.2x50mers.hg38-male.unique
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py mSTARR_seq_human-DNA-Rep4-SRX3302709/SRR6192698_1.fastq.gz,mSTARR_seq_human-DNA-Rep4-SRX3302750/SRR6192657_1.fastq.gz mSTARR_seq_human-DNA-Rep4-SRX3302709/SRR6192698_2.fastq.gz,mSTARR_seq_human-DNA-Rep4-SRX3302750/SRR6192657_2.fastq.gz -trim 50 50 | /oak/stanford/groups/akundaje/marinovg/programs/bowtie-1.0.1+hamrhein_nh_patch/bowtie /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/hg38-male -p 20 -v 2 -k 2 -m 1 -t --best --strata -q --sam-nh -X 1000 --sam --12 - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools view -bT /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38.fa - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools sort - mSTARR_seq_human-DNA-Rep4.2x50mers.hg38-male.unique
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py mSTARR_seq_human-DNA-Rep5-SRX3302698/SRR6192709_1.fastq.gz,mSTARR_seq_human-DNA-Rep5-SRX3302705/SRR6192702_1.fastq.gz mSTARR_seq_human-DNA-Rep5-SRX3302698/SRR6192709_2.fastq.gz,mSTARR_seq_human-DNA-Rep5-SRX3302705/SRR6192702_2.fastq.gz -trim 50 50 | /oak/stanford/groups/akundaje/marinovg/programs/bowtie-1.0.1+hamrhein_nh_patch/bowtie /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/hg38-male -p 20 -v 2 -k 2 -m 1 -t --best --strata -q --sam-nh -X 1000 --sam --12 - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools view -bT /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38.fa - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools sort - mSTARR_seq_human-DNA-Rep5.2x50mers.hg38-male.unique
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py mSTARR_seq_human-DNA-Rep6-SRX3302696/SRR6192711_1.fastq.gz,mSTARR_seq_human-DNA-Rep6-SRX3302729/SRR6192678_1.fastq.gz mSTARR_seq_human-DNA-Rep6-SRX3302696/SRR6192711_2.fastq.gz,mSTARR_seq_human-DNA-Rep6-SRX3302729/SRR6192678_2.fastq.gz -trim 50 50 | /oak/stanford/groups/akundaje/marinovg/programs/bowtie-1.0.1+hamrhein_nh_patch/bowtie /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/hg38-male -p 20 -v 2 -k 2 -m 1 -t --best --strata -q --sam-nh -X 1000 --sam --12 - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools view -bT /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38.fa - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools sort - mSTARR_seq_human-DNA-Rep6.2x50mers.hg38-male.unique
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py mSTARR_seq_human-RNA-Rep1-SRX3302712/SRR6192695_1.fastq.gz,mSTARR_seq_human-RNA-Rep1-SRX3302743/SRR6192664_1.fastq.gz mSTARR_seq_human-RNA-Rep1-SRX3302712/SRR6192695_2.fastq.gz,mSTARR_seq_human-RNA-Rep1-SRX3302743/SRR6192664_2.fastq.gz -trim 50 50 | /oak/stanford/groups/akundaje/marinovg/programs/bowtie-1.0.1+hamrhein_nh_patch/bowtie /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/hg38-male -p 20 -v 2 -k 2 -m 1 -t --best --strata -q --sam-nh -X 1000 --sam --12 - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools view -bT /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38.fa - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools sort - mSTARR_seq_human-RNA-Rep1.2x50mers.hg38-male.unique
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py mSTARR_seq_human-RNA-Rep2-SRX3302714/SRR6192693_1.fastq.gz,mSTARR_seq_human-RNA-Rep2-SRX3302749/SRR6192658_1.fastq.gz mSTARR_seq_human-RNA-Rep2-SRX3302714/SRR6192693_2.fastq.gz,mSTARR_seq_human-RNA-Rep2-SRX3302749/SRR6192658_2.fastq.gz -trim 50 50 | /oak/stanford/groups/akundaje/marinovg/programs/bowtie-1.0.1+hamrhein_nh_patch/bowtie /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/hg38-male -p 20 -v 2 -k 2 -m 1 -t --best --strata -q --sam-nh -X 1000 --sam --12 - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools view -bT /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38.fa - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools sort - mSTARR_seq_human-RNA-Rep2.2x50mers.hg38-male.unique
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py mSTARR_seq_human-RNA-Rep3-SRX3302708/SRR6192699_1.fastq.gz,mSTARR_seq_human-RNA-Rep3-SRX3302747/SRR6192660_1.fastq.gz mSTARR_seq_human-RNA-Rep3-SRX3302708/SRR6192699_2.fastq.gz,mSTARR_seq_human-RNA-Rep3-SRX3302747/SRR6192660_2.fastq.gz -trim 50 50 | /oak/stanford/groups/akundaje/marinovg/programs/bowtie-1.0.1+hamrhein_nh_patch/bowtie /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/hg38-male -p 20 -v 2 -k 2 -m 1 -t --best --strata -q --sam-nh -X 1000 --sam --12 - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools view -bT /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38.fa - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools sort - mSTARR_seq_human-RNA-Rep3.2x50mers.hg38-male.unique
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py mSTARR_seq_human-RNA-Rep4-SRX3302710/SRR6192697_1.fastq.gz,mSTARR_seq_human-RNA-Rep4-SRX3302751/SRR6192656_1.fastq.gz mSTARR_seq_human-RNA-Rep4-SRX3302710/SRR6192697_2.fastq.gz,mSTARR_seq_human-RNA-Rep4-SRX3302751/SRR6192656_2.fastq.gz -trim 50 50 | /oak/stanford/groups/akundaje/marinovg/programs/bowtie-1.0.1+hamrhein_nh_patch/bowtie /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/hg38-male -p 20 -v 2 -k 2 -m 1 -t --best --strata -q --sam-nh -X 1000 --sam --12 - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools view -bT /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38.fa - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools sort - mSTARR_seq_human-RNA-Rep4.2x50mers.hg38-male.unique
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py mSTARR_seq_human-RNA-Rep5-SRX3302697/SRR6192710_1.fastq.gz,mSTARR_seq_human-RNA-Rep5-SRX3302706/SRR6192701_1.fastq.gz mSTARR_seq_human-RNA-Rep5-SRX3302697/SRR6192710_2.fastq.gz,mSTARR_seq_human-RNA-Rep5-SRX3302706/SRR6192701_2.fastq.gz -trim 50 50 | /oak/stanford/groups/akundaje/marinovg/programs/bowtie-1.0.1+hamrhein_nh_patch/bowtie /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/hg38-male -p 20 -v 2 -k 2 -m 1 -t --best --strata -q --sam-nh -X 1000 --sam --12 - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools view -bT /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38.fa - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools sort - mSTARR_seq_human-RNA-Rep5.2x50mers.hg38-male.unique
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py mSTARR_seq_human-RNA-Rep6-SRX3302695/SRR6192712_1.fastq.gz,mSTARR_seq_human-RNA-Rep6-SRX3302728/SRR6192679_1.fastq.gz mSTARR_seq_human-RNA-Rep6-SRX3302695/SRR6192712_2.fastq.gz,mSTARR_seq_human-RNA-Rep6-SRX3302728/SRR6192679_2.fastq.gz -trim 50 50 | /oak/stanford/groups/akundaje/marinovg/programs/bowtie-1.0.1+hamrhein_nh_patch/bowtie /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/hg38-male -p 20 -v 2 -k 2 -m 1 -t --best --strata -q --sam-nh -X 1000 --sam --12 - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools view -bT /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38.fa - | /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools sort - mSTARR_seq_human-RNA-Rep6.2x50mers.hg38-male.unique