/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642849 -O primed_primed_H3K27ac_extplasmid_1-GSM2648935
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642850 -O primed_primed_H3K27ac_extplasmid_2-GSM2648936
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642851 -O primed_primed_H3K4me1_extplasmid_1-GSM2648937
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642852 -O primed_primed_H3K4me1_extplasmid_2-GSM2648938
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642853 -O primed_primed_Input_extplasmid_1-GSM2648939
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642854 -O primed_primed_Input_extplasmid_2-GSM2648940
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642855 -O primed_primed_Nanog_extplasmid_1-GSM2648941
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642856 -O primed_primed_Nanog_extplasmid_2-GSM2648942
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642857 -O primed_primed_Oct4_extplasmid_1-GSM2648943
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642858 -O primed_primed_Oct4_extplasmid_2-GSM2648944
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642859 -O naive_H3K27ac_plasmid_1-GSM2648945
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642860 -O primed_H3K27ac_plasmid_1-GSM2648946
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642861 -O naive_H3K4me1_plasmid_1-GSM2648947
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642862 -O primed_H3K4me1_plasmid_1-GSM2648948
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642863 -O primed_Input_plasmid_1-GSM2648949
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642864 -O naive_Nanog_plasmid_1-GSM2648950
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642865 -O primed_Nanog_plasmid_1-GSM2648951
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642866 -O naive_Oct4_plasmid_1-GSM2648952
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642867 -O primed_Oct4_plasmid_1-GSM2648953
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642868 -O naive_naive_H3K27ac_RNA_1-GSM2648954
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642869 -O naive_naive_H3K27ac_RNA_2-GSM2648955
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642870 -O primed_primed_H3K27ac_RNA_1-GSM2648956
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642871 -O primed_primed_H3K27ac_RNA_2-GSM2648957
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642872 -O naive_naive_H3K4me1_RNA_1-GSM2648958
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642873 -O naive_naive_H3K4me1_RNA_2-GSM2648959
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642874 -O primed_primed_H3K4me1_RNA_1-GSM2648960
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642875 -O primed_primed_H3K4me1_RNA_2-GSM2648961
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642876 -O primed_naive_Input_RNA_1-GSM2648962
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642877 -O primed_naive_Input_RNA_2-GSM2648963
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642878 -O primed_primed_Input_RNA_1-GSM2648964
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642879 -O primed_primed_Input_RNA_2-GSM2648965
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642880 -O naive_naive_Nanog_RNA_1-GSM2648966
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642881 -O naive_naive_Nanog_RNA_2-GSM2648967
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642882 -O naive_primed_Nanog_RNA_1-GSM2648968
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642883 -O naive_primed_Nanog_RNA_2-GSM2648969
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642884 -O primed_naive_Nanog_RNA_1-GSM2648970
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642885 -O primed_naive_Nanog_RNA_2-GSM2648971
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642886 -O primed_primed_Nanog_RNA_1-GSM2648972
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642887 -O primed_primed_Nanog_RNA_2-GSM2648973
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642888 -O naive_naive_Oct4_RNA_1-GSM2648974
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642889 -O naive_naive_Oct4_RNA_2-GSM2648975
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642890 -O naive_primed_Oct4_RNA_1-GSM2648976
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642891 -O naive_primed_Oct4_RNA_2-GSM2648977
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642892 -O primed_naive_Oct4_RNA_1-GSM2648978
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642893 -O primed_naive_Oct4_RNA_2-GSM2648979
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642894 -O primed_primed_Oct4_RNA_1-GSM2648980
/oak/stanford/groups/akundaje/marinovg/programs/sratoolkit.2.8.2-1-centos_linux64/bin/fastq-dump --split-spot --split-files --gzip -A SRR5642895 -O primed_primed_Oct4_RNA_2-GSM2648981