python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate.py /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.refFlat-2012-10-22.TSS-0bp.bed 0 1 2 4000 2017-07-17-FrozKera-DMSO-0h-a_R1.2x36mers.hg19-male.nochrM.dedup.5p.wig.bz2 hg19.refFlat-2012-10-22.TSS-0bp.4kb-radius-2017-07-17-FrozKera-DMSO-0h-a_R1.2x36mers.hg19-male.nochrM.dedup.5p -normalize
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate.py /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.refFlat-2012-10-22.TSS-0bp.bed 0 1 2 4000 2017-07-17-FrozKera-DMSO-0h-b_R1.2x36mers.hg19-male.nochrM.dedup.5p.wig.bz2 hg19.refFlat-2012-10-22.TSS-0bp.4kb-radius-2017-07-17-FrozKera-DMSO-0h-b_R1.2x36mers.hg19-male.nochrM.dedup.5p -normalize
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate.py /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.refFlat-2012-10-22.TSS-0bp.bed 0 1 2 4000 2017-07-17-FrozKera-DMSO-24h-a_R1.2x36mers.hg19-male.nochrM.dedup.5p.wig.bz2 hg19.refFlat-2012-10-22.TSS-0bp.4kb-radius-2017-07-17-FrozKera-DMSO-24h-a_R1.2x36mers.hg19-male.nochrM.dedup.5p -normalize
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate.py /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.refFlat-2012-10-22.TSS-0bp.bed 0 1 2 4000 2017-07-17-FrozKera-DMSO-24h-b_R1.2x36mers.hg19-male.nochrM.dedup.5p.wig.bz2 hg19.refFlat-2012-10-22.TSS-0bp.4kb-radius-2017-07-17-FrozKera-DMSO-24h-b_R1.2x36mers.hg19-male.nochrM.dedup.5p -normalize
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate.py /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.refFlat-2012-10-22.TSS-0bp.bed 0 1 2 4000 2017-07-17-FrozKera-DMSO-24hI-a_R1.2x36mers.hg19-male.nochrM.dedup.5p.wig.bz2 hg19.refFlat-2012-10-22.TSS-0bp.4kb-radius-2017-07-17-FrozKera-DMSO-24hI-a_R1.2x36mers.hg19-male.nochrM.dedup.5p -normalize
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate.py /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.refFlat-2012-10-22.TSS-0bp.bed 0 1 2 4000 2017-07-17-FrozKera-DMSO-24hI-b_R1.2x36mers.hg19-male.nochrM.dedup.5p.wig.bz2 hg19.refFlat-2012-10-22.TSS-0bp.4kb-radius-2017-07-17-FrozKera-DMSO-24hI-b_R1.2x36mers.hg19-male.nochrM.dedup.5p -normalize
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate.py /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.refFlat-2012-10-22.TSS-0bp.bed 0 1 2 4000 2017-07-17-FrozKera-DMSO-6h-a_R1.2x36mers.hg19-male.nochrM.dedup.5p.wig.bz2 hg19.refFlat-2012-10-22.TSS-0bp.4kb-radius-2017-07-17-FrozKera-DMSO-6h-a_R1.2x36mers.hg19-male.nochrM.dedup.5p -normalize
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate.py /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.refFlat-2012-10-22.TSS-0bp.bed 0 1 2 4000 2017-07-17-FrozKera-DMSO-6h-b_R1.2x36mers.hg19-male.nochrM.dedup.5p.wig.bz2 hg19.refFlat-2012-10-22.TSS-0bp.4kb-radius-2017-07-17-FrozKera-DMSO-6h-b_R1.2x36mers.hg19-male.nochrM.dedup.5p -normalize
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate.py /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.refFlat-2012-10-22.TSS-0bp.bed 0 1 2 4000 2017-07-17-FrozKera-DMSO-0h-a_R1.2x36mers.hg19-male.nochrM.dedup.wig.bz2 hg19.refFlat-2012-10-22.TSS-0bp.4kb-radius-2017-07-17-FrozKera-DMSO-0h-a_R1.2x36mers.hg19-male.nochrM.dedup -normalize
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate.py /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.refFlat-2012-10-22.TSS-0bp.bed 0 1 2 4000 2017-07-17-FrozKera-DMSO-0h-b_R1.2x36mers.hg19-male.nochrM.dedup.wig.bz2 hg19.refFlat-2012-10-22.TSS-0bp.4kb-radius-2017-07-17-FrozKera-DMSO-0h-b_R1.2x36mers.hg19-male.nochrM.dedup -normalize
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate.py /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.refFlat-2012-10-22.TSS-0bp.bed 0 1 2 4000 2017-07-17-FrozKera-DMSO-24h-a_R1.2x36mers.hg19-male.nochrM.dedup.wig.bz2 hg19.refFlat-2012-10-22.TSS-0bp.4kb-radius-2017-07-17-FrozKera-DMSO-24h-a_R1.2x36mers.hg19-male.nochrM.dedup -normalize
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate.py /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.refFlat-2012-10-22.TSS-0bp.bed 0 1 2 4000 2017-07-17-FrozKera-DMSO-24h-b_R1.2x36mers.hg19-male.nochrM.dedup.wig.bz2 hg19.refFlat-2012-10-22.TSS-0bp.4kb-radius-2017-07-17-FrozKera-DMSO-24h-b_R1.2x36mers.hg19-male.nochrM.dedup -normalize
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate.py /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.refFlat-2012-10-22.TSS-0bp.bed 0 1 2 4000 2017-07-17-FrozKera-DMSO-24hI-a_R1.2x36mers.hg19-male.nochrM.dedup.wig.bz2 hg19.refFlat-2012-10-22.TSS-0bp.4kb-radius-2017-07-17-FrozKera-DMSO-24hI-a_R1.2x36mers.hg19-male.nochrM.dedup -normalize
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate.py /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.refFlat-2012-10-22.TSS-0bp.bed 0 1 2 4000 2017-07-17-FrozKera-DMSO-24hI-b_R1.2x36mers.hg19-male.nochrM.dedup.wig.bz2 hg19.refFlat-2012-10-22.TSS-0bp.4kb-radius-2017-07-17-FrozKera-DMSO-24hI-b_R1.2x36mers.hg19-male.nochrM.dedup -normalize
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate.py /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.refFlat-2012-10-22.TSS-0bp.bed 0 1 2 4000 2017-07-17-FrozKera-DMSO-6h-a_R1.2x36mers.hg19-male.nochrM.dedup.wig.bz2 hg19.refFlat-2012-10-22.TSS-0bp.4kb-radius-2017-07-17-FrozKera-DMSO-6h-a_R1.2x36mers.hg19-male.nochrM.dedup -normalize
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate.py /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.refFlat-2012-10-22.TSS-0bp.bed 0 1 2 4000 2017-07-17-FrozKera-DMSO-6h-b_R1.2x36mers.hg19-male.nochrM.dedup.wig.bz2 hg19.refFlat-2012-10-22.TSS-0bp.4kb-radius-2017-07-17-FrozKera-DMSO-6h-b_R1.2x36mers.hg19-male.nochrM.dedup -normalize