python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py 2017-07-17-FrozKera-DMSO-0h-a_R1.2x36mers.hg19-male.bam SAMstats-2017-07-17-FrozKera-DMSO-0h-a_R1.2x36mers.hg19-male -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py 2017-07-17-FrozKera-DMSO-0h-b_R1.2x36mers.hg19-male.bam SAMstats-2017-07-17-FrozKera-DMSO-0h-b_R1.2x36mers.hg19-male -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py 2017-07-17-FrozKera-DMSO-24h-a_R1.2x36mers.hg19-male.bam SAMstats-2017-07-17-FrozKera-DMSO-24h-a_R1.2x36mers.hg19-male -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py 2017-07-17-FrozKera-DMSO-24h-b_R1.2x36mers.hg19-male.bam SAMstats-2017-07-17-FrozKera-DMSO-24h-b_R1.2x36mers.hg19-male -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py 2017-07-17-FrozKera-DMSO-24hI-a_R1.2x36mers.hg19-male.bam SAMstats-2017-07-17-FrozKera-DMSO-24hI-a_R1.2x36mers.hg19-male -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py 2017-07-17-FrozKera-DMSO-24hI-b_R1.2x36mers.hg19-male.bam SAMstats-2017-07-17-FrozKera-DMSO-24hI-b_R1.2x36mers.hg19-male -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py 2017-07-17-FrozKera-DMSO-6h-a_R1.2x36mers.hg19-male.bam SAMstats-2017-07-17-FrozKera-DMSO-6h-a_R1.2x36mers.hg19-male -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py 2017-07-17-FrozKera-DMSO-6h-b_R1.2x36mers.hg19-male.bam SAMstats-2017-07-17-FrozKera-DMSO-6h-b_R1.2x36mers.hg19-male -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py 2017-07-17-FrozKera-DMSO-0h-a_R1.2x36mers.chrM.bam SAMstats-2017-07-17-FrozKera-DMSO-0h-a_R1.2x36mers.chrM -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py 2017-07-17-FrozKera-DMSO-0h-b_R1.2x36mers.chrM.bam SAMstats-v2017-07-17-FrozKera-DMSO-0h-b_R1.2x36mers.chrM -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py 2017-07-17-FrozKera-DMSO-24h-a_R1.2x36mers.chrM.bam SAMstats-2017-07-17-FrozKera-DMSO-24h-a_R1.2x36mers.chrM -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py 2017-07-17-FrozKera-DMSO-24h-b_R1.2x36mers.chrM.bam SAMstats-2017-07-17-FrozKera-DMSO-24h-b_R1.2x36mers.chrM -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py 2017-07-17-FrozKera-DMSO-24hI-a_R1.2x36mers.chrM.bam SAMstats-2017-07-17-FrozKera-DMSO-24hI-a_R1.2x36mers.chrM -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py 2017-07-17-FrozKera-DMSO-24hI-b_R1.2x36mers.chrM.bam SAMstats-2017-07-17-FrozKera-DMSO-24hI-b_R1.2x36mers.chrM -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py 2017-07-17-FrozKera-DMSO-6h-a_R1.2x36mers.chrM.bam SAMstats-2017-07-17-FrozKera-DMSO-6h-a_R1.2x36mers.chrM -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py 2017-07-17-FrozKera-DMSO-6h-b_R1.2x36mers.chrM.bam SAMstats-2017-07-17-FrozKera-DMSO-6h-b_R1.2x36mers.chrM -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired