## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[cf.Adult5.right_ventricle.FF.2x36mers.canFam3.unique.bam] OUTPUT=cf.Adult5.right_ventricle.FF.2x36mers.canFam3.unique.dedup.bam METRICS_FILE=cf.Adult5.right_ventricle.FF.2x36mers.canFam3.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Oct 23 09:20:55 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	17445644	0	0	465053	0	0.026657	321379875

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.947163
3.0	2.844282
4.0	3.694
5.0	4.498822
6.0	5.26112
7.0	5.983141
8.0	6.667013
9.0	7.314751
10.0	7.928265
11.0	8.509363
12.0	9.059758
13.0	9.581072
14.0	10.074842
15.0	10.542522
16.0	10.985492
17.0	11.405057
18.0	11.802454
19.0	12.178853
20.0	12.535365
21.0	12.87304
22.0	13.192874
23.0	13.495808
24.0	13.782737
25.0	14.054505
26.0	14.311914
27.0	14.555723
28.0	14.786649
29.0	15.005374
30.0	15.212542
31.0	15.408765
32.0	15.594619
33.0	15.770654
34.0	15.937388
35.0	16.095312
36.0	16.244892
37.0	16.386568
38.0	16.520759
39.0	16.64786
40.0	16.768245
41.0	16.88227
42.0	16.990269
43.0	17.092563
44.0	17.189452
45.0	17.281221
46.0	17.368141
47.0	17.45047
48.0	17.528448
49.0	17.602306
50.0	17.672261
51.0	17.738521
52.0	17.801279
53.0	17.860722
54.0	17.917023
55.0	17.97035
56.0	18.02086
57.0	18.0687
58.0	18.114013
59.0	18.156932
60.0	18.197583
61.0	18.236086
62.0	18.272555
63.0	18.307097
64.0	18.339814
65.0	18.370802
66.0	18.400153
67.0	18.427953
68.0	18.454285
69.0	18.479225
70.0	18.502847
71.0	18.525221
72.0	18.546413
73.0	18.566485
74.0	18.585497
75.0	18.603504
76.0	18.62056
77.0	18.636715
78.0	18.652016
79.0	18.666508
80.0	18.680235
81.0	18.693237
82.0	18.705551
83.0	18.717215
84.0	18.728263
85.0	18.738727
86.0	18.748638
87.0	18.758025
88.0	18.766917
89.0	18.775338
90.0	18.783315
91.0	18.79087
92.0	18.798026
93.0	18.804804
94.0	18.811224
95.0	18.817304
96.0	18.823064
97.0	18.828519
98.0	18.833686
99.0	18.838579
100.0	18.843215