## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[cf.Adult4.pancreas.FF.2x36mers.canFam3.unique.bam] OUTPUT=cf.Adult4.pancreas.FF.2x36mers.canFam3.unique.dedup.bam METRICS_FILE=cf.Adult4.pancreas.FF.2x36mers.canFam3.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Oct 23 09:20:55 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	50990331	0	0	7492014	0	0.14693	156069817

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.721289
3.0	2.241548
4.0	2.616805
5.0	2.887473
6.0	3.082704
7.0	3.223521
8.0	3.325092
9.0	3.398353
10.0	3.451196
11.0	3.489311
12.0	3.516803
13.0	3.536633
14.0	3.550936
15.0	3.561252
16.0	3.568693
17.0	3.574061
18.0	3.577932
19.0	3.580724
20.0	3.582738
21.0	3.584191
22.0	3.585239
23.0	3.585995
24.0	3.58654
25.0	3.586933
26.0	3.587217
27.0	3.587421
28.0	3.587569
29.0	3.587675
30.0	3.587752
31.0	3.587807
32.0	3.587847
33.0	3.587876
34.0	3.587897
35.0	3.587912
36.0	3.587923
37.0	3.587931
38.0	3.587936
39.0	3.58794
40.0	3.587943
41.0	3.587945
42.0	3.587947
43.0	3.587948
44.0	3.587949
45.0	3.587949
46.0	3.58795
47.0	3.58795
48.0	3.58795
49.0	3.58795
50.0	3.58795
51.0	3.58795
52.0	3.587951
53.0	3.587951
54.0	3.587951
55.0	3.587951
56.0	3.587951
57.0	3.587951
58.0	3.587951
59.0	3.587951
60.0	3.587951
61.0	3.587951
62.0	3.587951
63.0	3.587951
64.0	3.587951
65.0	3.587951
66.0	3.587951
67.0	3.587951
68.0	3.587951
69.0	3.587951
70.0	3.587951
71.0	3.587951
72.0	3.587951
73.0	3.587951
74.0	3.587951
75.0	3.587951
76.0	3.587951
77.0	3.587951
78.0	3.587951
79.0	3.587951
80.0	3.587951
81.0	3.587951
82.0	3.587951
83.0	3.587951
84.0	3.587951
85.0	3.587951
86.0	3.587951
87.0	3.587951
88.0	3.587951
89.0	3.587951
90.0	3.587951
91.0	3.587951
92.0	3.587951
93.0	3.587951
94.0	3.587951
95.0	3.587951
96.0	3.587951
97.0	3.587951
98.0	3.587951
99.0	3.587951
100.0	3.587951