## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[cf.Adult3.pancreas.FF.2x36mers.canFam3.unique.bam] OUTPUT=cf.Adult3.pancreas.FF.2x36mers.canFam3.unique.dedup.bam METRICS_FILE=cf.Adult3.pancreas.FF.2x36mers.canFam3.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Oct 23 09:20:55 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	46122282	0	0	7056809	0	0.153002	134922466

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.71046
3.0	2.215213
4.0	2.57382
5.0	2.828596
6.0	3.009604
7.0	3.138202
8.0	3.229567
9.0	3.294478
10.0	3.340594
11.0	3.373358
12.0	3.396635
13.0	3.413173
14.0	3.424922
15.0	3.43327
16.0	3.4392
17.0	3.443414
18.0	3.446407
19.0	3.448534
20.0	3.450045
21.0	3.451118
22.0	3.451881
23.0	3.452423
24.0	3.452808
25.0	3.453081
26.0	3.453275
27.0	3.453414
28.0	3.453512
29.0	3.453581
30.0	3.453631
31.0	3.453666
32.0	3.453691
33.0	3.453709
34.0	3.453721
35.0	3.45373
36.0	3.453737
37.0	3.453741
38.0	3.453744
39.0	3.453747
40.0	3.453748
41.0	3.453749
42.0	3.45375
43.0	3.453751
44.0	3.453751
45.0	3.453752
46.0	3.453752
47.0	3.453752
48.0	3.453752
49.0	3.453752
50.0	3.453752
51.0	3.453752
52.0	3.453752
53.0	3.453752
54.0	3.453752
55.0	3.453752
56.0	3.453752
57.0	3.453752
58.0	3.453752
59.0	3.453752
60.0	3.453752
61.0	3.453752
62.0	3.453752
63.0	3.453752
64.0	3.453752
65.0	3.453752
66.0	3.453752
67.0	3.453752
68.0	3.453752
69.0	3.453752
70.0	3.453752
71.0	3.453752
72.0	3.453752
73.0	3.453752
74.0	3.453752
75.0	3.453752
76.0	3.453752
77.0	3.453752
78.0	3.453752
79.0	3.453752
80.0	3.453752
81.0	3.453752
82.0	3.453752
83.0	3.453752
84.0	3.453752
85.0	3.453752
86.0	3.453752
87.0	3.453752
88.0	3.453752
89.0	3.453752
90.0	3.453752
91.0	3.453752
92.0	3.453752
93.0	3.453752
94.0	3.453752
95.0	3.453752
96.0	3.453752
97.0	3.453752
98.0	3.453752
99.0	3.453752
100.0	3.453752