## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[ATAC-Testis-P7-Wt-To-R1-L7279_S1-GSM3405372.2x36mers.Talpa_occidentalis-MPIMG_talOcc4v2.1.unique.bam] OUTPUT=ATAC-Testis-P7-Wt-To-R1-L7279_S1-GSM3405372.2x36mers.Talpa_occidentalis-MPIMG_talOcc4v2.1.unique.dedup.bam METRICS_FILE=ATAC-Testis-P7-Wt-To-R1-L7279_S1-GSM3405372.2x36mers.Talpa_occidentalis-MPIMG_talOcc4v2.1.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Oct 08 12:04:59 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	48455423	0	0	5545833	0	0.114452	195203696

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.78018
3.0	2.388862
4.0	2.863743
5.0	3.234237
6.0	3.523288
7.0	3.7488
8.0	3.924741
9.0	4.062006
10.0	4.169098
11.0	4.252648
12.0	4.317833
13.0	4.368689
14.0	4.408366
15.0	4.439321
16.0	4.463471
17.0	4.482313
18.0	4.497013
19.0	4.508482
20.0	4.517429
21.0	4.52441
22.0	4.529856
23.0	4.534105
24.0	4.53742
25.0	4.540006
26.0	4.542024
27.0	4.543598
28.0	4.544827
29.0	4.545785
30.0	4.546532
31.0	4.547116
32.0	4.547571
33.0	4.547926
34.0	4.548203
35.0	4.548419
36.0	4.548587
37.0	4.548719
38.0	4.548822
39.0	4.548902
40.0	4.548964
41.0	4.549013
42.0	4.549051
43.0	4.54908
44.0	4.549104
45.0	4.549122
46.0	4.549136
47.0	4.549147
48.0	4.549155
49.0	4.549162
50.0	4.549167
51.0	4.549171
52.0	4.549174
53.0	4.549177
54.0	4.549179
55.0	4.54918
56.0	4.549182
57.0	4.549183
58.0	4.549183
59.0	4.549184
60.0	4.549184
61.0	4.549185
62.0	4.549185
63.0	4.549185
64.0	4.549185
65.0	4.549185
66.0	4.549185
67.0	4.549185
68.0	4.549186
69.0	4.549186
70.0	4.549186
71.0	4.549186
72.0	4.549186
73.0	4.549186
74.0	4.549186
75.0	4.549186
76.0	4.549186
77.0	4.549186
78.0	4.549186
79.0	4.549186
80.0	4.549186
81.0	4.549186
82.0	4.549186
83.0	4.549186
84.0	4.549186
85.0	4.549186
86.0	4.549186
87.0	4.549186
88.0	4.549186
89.0	4.549186
90.0	4.549186
91.0	4.549186
92.0	4.549186
93.0	4.549186
94.0	4.549186
95.0	4.549186
96.0	4.549186
97.0	4.549186
98.0	4.549186
99.0	4.549186
100.0	4.549186