## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[ATAC-OvaryPortion-P7-Wt-To-R2-L7298_S2-GSM3405369.2x36mers.Talpa_occidentalis-MPIMG_talOcc4v2.1.unique.bam] OUTPUT=ATAC-OvaryPortion-P7-Wt-To-R2-L7298_S2-GSM3405369.2x36mers.Talpa_occidentalis-MPIMG_talOcc4v2.1.unique.dedup.bam METRICS_FILE=ATAC-OvaryPortion-P7-Wt-To-R2-L7298_S2-GSM3405369.2x36mers.Talpa_occidentalis-MPIMG_talOcc4v2.1.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Oct 08 12:04:59 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	52608700	0	0	3600544	0	0.06844	366597355

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.866316
3.0	2.61682
4.0	3.266993
5.0	3.830249
6.0	4.318206
7.0	4.740932
8.0	5.107146
9.0	5.424403
10.0	5.699247
11.0	5.93735
12.0	6.143622
13.0	6.322319
14.0	6.477127
15.0	6.611239
16.0	6.727423
17.0	6.828075
18.0	6.915272
19.0	6.990811
20.0	7.056252
21.0	7.112945
22.0	7.162059
23.0	7.204607
24.0	7.241467
25.0	7.2734
26.0	7.301064
27.0	7.325029
28.0	7.345791
29.0	7.363777
30.0	7.379359
31.0	7.392858
32.0	7.404552
33.0	7.414682
34.0	7.423459
35.0	7.431062
36.0	7.437649
37.0	7.443355
38.0	7.448299
39.0	7.452581
40.0	7.456291
41.0	7.459505
42.0	7.46229
43.0	7.464702
44.0	7.466792
45.0	7.468602
46.0	7.47017
47.0	7.471529
48.0	7.472706
49.0	7.473726
50.0	7.474609
51.0	7.475374
52.0	7.476037
53.0	7.476612
54.0	7.477109
55.0	7.47754
56.0	7.477914
57.0	7.478237
58.0	7.478517
59.0	7.47876
60.0	7.478971
61.0	7.479153
62.0	7.479311
63.0	7.479447
64.0	7.479566
65.0	7.479668
66.0	7.479757
67.0	7.479834
68.0	7.479901
69.0	7.479959
70.0	7.480009
71.0	7.480052
72.0	7.48009
73.0	7.480123
74.0	7.480151
75.0	7.480175
76.0	7.480196
77.0	7.480215
78.0	7.480231
79.0	7.480244
80.0	7.480256
81.0	7.480267
82.0	7.480276
83.0	7.480283
84.0	7.48029
85.0	7.480296
86.0	7.480301
87.0	7.480305
88.0	7.480309
89.0	7.480312
90.0	7.480315
91.0	7.480318
92.0	7.48032
93.0	7.480322
94.0	7.480323
95.0	7.480325
96.0	7.480326
97.0	7.480327
98.0	7.480328
99.0	7.480329
100.0	7.480329