## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[ATAC-OvaryPortion-P7-Wt-To-R1-L7297_S1-GSM3405368.2x36mers.Talpa_occidentalis-MPIMG_talOcc4v2.1.unique.bam] OUTPUT=ATAC-OvaryPortion-P7-Wt-To-R1-L7297_S1-GSM3405368.2x36mers.Talpa_occidentalis-MPIMG_talOcc4v2.1.unique.dedup.bam METRICS_FILE=ATAC-OvaryPortion-P7-Wt-To-R1-L7297_S1-GSM3405368.2x36mers.Talpa_occidentalis-MPIMG_talOcc4v2.1.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Oct 08 12:04:59 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	40695241	0	0	2408597	0	0.059186	330086609

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.88401
3.0	2.665485
4.0	3.356316
5.0	3.967018
6.0	4.506885
7.0	4.984132
8.0	5.406024
9.0	5.778981
10.0	6.108679
11.0	6.400135
12.0	6.657786
13.0	6.885551
14.0	7.086898
15.0	7.264891
16.0	7.422239
17.0	7.561335
18.0	7.684298
19.0	7.792999
20.0	7.889091
21.0	7.974038
22.0	8.049132
23.0	8.115516
24.0	8.174199
25.0	8.226077
26.0	8.271936
27.0	8.312477
28.0	8.348315
29.0	8.379997
30.0	8.408004
31.0	8.432762
32.0	8.454648
33.0	8.473996
34.0	8.4911
35.0	8.50622
36.0	8.519586
37.0	8.531402
38.0	8.541847
39.0	8.551081
40.0	8.559244
41.0	8.56646
42.0	8.572839
43.0	8.578478
44.0	8.583463
45.0	8.58787
46.0	8.591765
47.0	8.595209
48.0	8.598253
49.0	8.600945
50.0	8.603324
51.0	8.605427
52.0	8.607286
53.0	8.60893
54.0	8.610383
55.0	8.611667
56.0	8.612802
57.0	8.613806
58.0	8.614693
59.0	8.615478
60.0	8.616171
61.0	8.616784
62.0	8.617326
63.0	8.617805
64.0	8.618228
65.0	8.618603
66.0	8.618934
67.0	8.619226
68.0	8.619485
69.0	8.619713
70.0	8.619916
71.0	8.620094
72.0	8.620252
73.0	8.620392
74.0	8.620515
75.0	8.620624
76.0	8.620721
77.0	8.620806
78.0	8.620881
79.0	8.620948
80.0	8.621007
81.0	8.621059
82.0	8.621105
83.0	8.621146
84.0	8.621182
85.0	8.621213
86.0	8.621242
87.0	8.621266
88.0	8.621288
89.0	8.621308
90.0	8.621325
91.0	8.62134
92.0	8.621354
93.0	8.621365
94.0	8.621376
95.0	8.621385
96.0	8.621393
97.0	8.621401
98.0	8.621407
99.0	8.621413
100.0	8.621418