## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[Bat3_Testis_atac-GSM5668080.2x36mers.GCF_014176215.1_mRouAeg1.p_genomic.unique.bam] OUTPUT=Bat3_Testis_atac-GSM5668080.2x36mers.GCF_014176215.1_mRouAeg1.p_genomic.unique.dedup.bam METRICS_FILE=Bat3_Testis_atac-GSM5668080.2x36mers.GCF_014176215.1_mRouAeg1.p_genomic.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Oct 08 21:27:33 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	26536415	0	0	4463417	0	0.1682	69765123

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.68361
3.0	2.150932
4.0	2.470398
5.0	2.688789
6.0	2.838082
7.0	2.940141
8.0	3.009909
9.0	3.057604
10.0	3.090208
11.0	3.112497
12.0	3.127733
13.0	3.138149
14.0	3.14527
15.0	3.150137
16.0	3.153465
17.0	3.15574
18.0	3.157295
19.0	3.158358
20.0	3.159084
21.0	3.159581
22.0	3.159921
23.0	3.160153
24.0	3.160312
25.0	3.16042
26.0	3.160494
27.0	3.160545
28.0	3.16058
29.0	3.160603
30.0	3.16062
31.0	3.160631
32.0	3.160638
33.0	3.160643
34.0	3.160647
35.0	3.160649
36.0	3.160651
37.0	3.160652
38.0	3.160653
39.0	3.160653
40.0	3.160654
41.0	3.160654
42.0	3.160654
43.0	3.160654
44.0	3.160654
45.0	3.160654
46.0	3.160655
47.0	3.160655
48.0	3.160655
49.0	3.160655
50.0	3.160655
51.0	3.160655
52.0	3.160655
53.0	3.160655
54.0	3.160655
55.0	3.160655
56.0	3.160655
57.0	3.160655
58.0	3.160655
59.0	3.160655
60.0	3.160655
61.0	3.160655
62.0	3.160655
63.0	3.160655
64.0	3.160655
65.0	3.160655
66.0	3.160655
67.0	3.160655
68.0	3.160655
69.0	3.160655
70.0	3.160655
71.0	3.160655
72.0	3.160655
73.0	3.160655
74.0	3.160655
75.0	3.160655
76.0	3.160655
77.0	3.160655
78.0	3.160655
79.0	3.160655
80.0	3.160655
81.0	3.160655
82.0	3.160655
83.0	3.160655
84.0	3.160655
85.0	3.160655
86.0	3.160655
87.0	3.160655
88.0	3.160655
89.0	3.160655
90.0	3.160655
91.0	3.160655
92.0	3.160655
93.0	3.160655
94.0	3.160655
95.0	3.160655
96.0	3.160655
97.0	3.160655
98.0	3.160655
99.0	3.160655
100.0	3.160655