## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[Bat3_Cerebellum_atac-GSM5668073.2x36mers.GCF_014176215.1_mRouAeg1.p_genomic.unique.bam] OUTPUT=Bat3_Cerebellum_atac-GSM5668073.2x36mers.GCF_014176215.1_mRouAeg1.p_genomic.unique.dedup.bam METRICS_FILE=Bat3_Cerebellum_atac-GSM5668073.2x36mers.GCF_014176215.1_mRouAeg1.p_genomic.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Oct 08 21:27:35 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	70255097	0	0	28799177	0	0.409923	60186536

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.311209
3.0	1.408061
4.0	1.438202
5.0	1.447582
6.0	1.450501
7.0	1.45141
8.0	1.451692
9.0	1.45178
10.0	1.451808
11.0	1.451816
12.0	1.451819
13.0	1.45182
14.0	1.45182
15.0	1.45182
16.0	1.45182
17.0	1.45182
18.0	1.45182
19.0	1.45182
20.0	1.45182
21.0	1.45182
22.0	1.45182
23.0	1.45182
24.0	1.45182
25.0	1.45182
26.0	1.45182
27.0	1.45182
28.0	1.45182
29.0	1.45182
30.0	1.45182
31.0	1.45182
32.0	1.45182
33.0	1.45182
34.0	1.45182
35.0	1.45182
36.0	1.45182
37.0	1.45182
38.0	1.45182
39.0	1.45182
40.0	1.45182
41.0	1.45182
42.0	1.45182
43.0	1.45182
44.0	1.45182
45.0	1.45182
46.0	1.45182
47.0	1.45182
48.0	1.45182
49.0	1.45182
50.0	1.45182
51.0	1.45182
52.0	1.45182
53.0	1.45182
54.0	1.45182
55.0	1.45182
56.0	1.45182
57.0	1.45182
58.0	1.45182
59.0	1.45182
60.0	1.45182
61.0	1.45182
62.0	1.45182
63.0	1.45182
64.0	1.45182
65.0	1.45182
66.0	1.45182
67.0	1.45182
68.0	1.45182
69.0	1.45182
70.0	1.45182
71.0	1.45182
72.0	1.45182
73.0	1.45182
74.0	1.45182
75.0	1.45182
76.0	1.45182
77.0	1.45182
78.0	1.45182
79.0	1.45182
80.0	1.45182
81.0	1.45182
82.0	1.45182
83.0	1.45182
84.0	1.45182
85.0	1.45182
86.0	1.45182
87.0	1.45182
88.0	1.45182
89.0	1.45182
90.0	1.45182
91.0	1.45182
92.0	1.45182
93.0	1.45182
94.0	1.45182
95.0	1.45182
96.0	1.45182
97.0	1.45182
98.0	1.45182
99.0	1.45182
100.0	1.45182