## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[8_22-ATAC-Seq-GSM3679608.2x36mers.GCF_003339765.1_Mmul_10_genomic.unique.bam] OUTPUT=8_22-ATAC-Seq-GSM3679608.2x36mers.GCF_003339765.1_Mmul_10_genomic.unique.dedup.bam METRICS_FILE=8_22-ATAC-Seq-GSM3679608.2x36mers.GCF_003339765.1_Mmul_10_genomic.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Oct 08 01:49:37 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	66841370	0	0	22545128	0	0.337293	75258887

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.411415
3.0	1.580678
4.0	1.650315
5.0	1.678964
6.0	1.690751
7.0	1.695601
8.0	1.697596
9.0	1.698417
10.0	1.698754
11.0	1.698893
12.0	1.69895
13.0	1.698974
14.0	1.698984
15.0	1.698988
16.0	1.698989
17.0	1.69899
18.0	1.69899
19.0	1.69899
20.0	1.69899
21.0	1.69899
22.0	1.69899
23.0	1.69899
24.0	1.69899
25.0	1.69899
26.0	1.69899
27.0	1.69899
28.0	1.69899
29.0	1.69899
30.0	1.69899
31.0	1.69899
32.0	1.69899
33.0	1.69899
34.0	1.69899
35.0	1.69899
36.0	1.69899
37.0	1.69899
38.0	1.69899
39.0	1.69899
40.0	1.69899
41.0	1.69899
42.0	1.69899
43.0	1.69899
44.0	1.69899
45.0	1.69899
46.0	1.69899
47.0	1.69899
48.0	1.69899
49.0	1.69899
50.0	1.69899
51.0	1.69899
52.0	1.69899
53.0	1.69899
54.0	1.69899
55.0	1.69899
56.0	1.69899
57.0	1.69899
58.0	1.69899
59.0	1.69899
60.0	1.69899
61.0	1.69899
62.0	1.69899
63.0	1.69899
64.0	1.69899
65.0	1.69899
66.0	1.69899
67.0	1.69899
68.0	1.69899
69.0	1.69899
70.0	1.69899
71.0	1.69899
72.0	1.69899
73.0	1.69899
74.0	1.69899
75.0	1.69899
76.0	1.69899
77.0	1.69899
78.0	1.69899
79.0	1.69899
80.0	1.69899
81.0	1.69899
82.0	1.69899
83.0	1.69899
84.0	1.69899
85.0	1.69899
86.0	1.69899
87.0	1.69899
88.0	1.69899
89.0	1.69899
90.0	1.69899
91.0	1.69899
92.0	1.69899
93.0	1.69899
94.0	1.69899
95.0	1.69899
96.0	1.69899
97.0	1.69899
98.0	1.69899
99.0	1.69899
100.0	1.69899