## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[7_46-ATAC-Seq-GSM4233078.2x36mers.GCF_003339765.1_Mmul_10_genomic.unique.bam] OUTPUT=7_46-ATAC-Seq-GSM4233078.2x36mers.GCF_003339765.1_Mmul_10_genomic.unique.dedup.bam METRICS_FILE=7_46-ATAC-Seq-GSM4233078.2x36mers.GCF_003339765.1_Mmul_10_genomic.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Oct 08 01:49:37 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	42995455	0	0	7753466	0	0.180332	104402044

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.66244
3.0	2.101266
4.0	2.391962
5.0	2.58453
6.0	2.712095
7.0	2.7966
8.0	2.852579
9.0	2.889661
10.0	2.914226
11.0	2.930499
12.0	2.941279
13.0	2.94842
14.0	2.95315
15.0	2.956284
16.0	2.95836
17.0	2.959735
18.0	2.960646
19.0	2.961249
20.0	2.961649
21.0	2.961914
22.0	2.962089
23.0	2.962205
24.0	2.962282
25.0	2.962333
26.0	2.962367
27.0	2.962389
28.0	2.962404
29.0	2.962414
30.0	2.962421
31.0	2.962425
32.0	2.962428
33.0	2.96243
34.0	2.962431
35.0	2.962432
36.0	2.962432
37.0	2.962433
38.0	2.962433
39.0	2.962433
40.0	2.962433
41.0	2.962433
42.0	2.962433
43.0	2.962433
44.0	2.962433
45.0	2.962433
46.0	2.962433
47.0	2.962433
48.0	2.962433
49.0	2.962433
50.0	2.962433
51.0	2.962433
52.0	2.962433
53.0	2.962433
54.0	2.962433
55.0	2.962433
56.0	2.962433
57.0	2.962433
58.0	2.962433
59.0	2.962433
60.0	2.962433
61.0	2.962433
62.0	2.962433
63.0	2.962433
64.0	2.962433
65.0	2.962433
66.0	2.962433
67.0	2.962433
68.0	2.962433
69.0	2.962433
70.0	2.962433
71.0	2.962433
72.0	2.962433
73.0	2.962433
74.0	2.962433
75.0	2.962433
76.0	2.962433
77.0	2.962433
78.0	2.962433
79.0	2.962433
80.0	2.962433
81.0	2.962433
82.0	2.962433
83.0	2.962433
84.0	2.962433
85.0	2.962433
86.0	2.962433
87.0	2.962433
88.0	2.962433
89.0	2.962433
90.0	2.962433
91.0	2.962433
92.0	2.962433
93.0	2.962433
94.0	2.962433
95.0	2.962433
96.0	2.962433
97.0	2.962433
98.0	2.962433
99.0	2.962433
100.0	2.962433