## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[6_14-ATAC-Seq-GSM3679598.2x36mers.GCF_003339765.1_Mmul_10_genomic.unique.bam] OUTPUT=6_14-ATAC-Seq-GSM3679598.2x36mers.GCF_003339765.1_Mmul_10_genomic.unique.dedup.bam METRICS_FILE=6_14-ATAC-Seq-GSM3679598.2x36mers.GCF_003339765.1_Mmul_10_genomic.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Oct 08 01:48:41 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	53808848	0	0	10939266	0	0.203299	113718975

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.623022
3.0	2.011178
4.0	2.253007
5.0	2.403673
6.0	2.49754
7.0	2.556022
8.0	2.592457
9.0	2.615157
10.0	2.6293
11.0	2.638111
12.0	2.6436
13.0	2.647021
14.0	2.649151
15.0	2.650479
16.0	2.651306
17.0	2.651821
18.0	2.652142
19.0	2.652342
20.0	2.652467
21.0	2.652545
22.0	2.652593
23.0	2.652623
24.0	2.652642
25.0	2.652653
26.0	2.652661
27.0	2.652665
28.0	2.652668
29.0	2.65267
30.0	2.652671
31.0	2.652672
32.0	2.652672
33.0	2.652672
34.0	2.652673
35.0	2.652673
36.0	2.652673
37.0	2.652673
38.0	2.652673
39.0	2.652673
40.0	2.652673
41.0	2.652673
42.0	2.652673
43.0	2.652673
44.0	2.652673
45.0	2.652673
46.0	2.652673
47.0	2.652673
48.0	2.652673
49.0	2.652673
50.0	2.652673
51.0	2.652673
52.0	2.652673
53.0	2.652673
54.0	2.652673
55.0	2.652673
56.0	2.652673
57.0	2.652673
58.0	2.652673
59.0	2.652673
60.0	2.652673
61.0	2.652673
62.0	2.652673
63.0	2.652673
64.0	2.652673
65.0	2.652673
66.0	2.652673
67.0	2.652673
68.0	2.652673
69.0	2.652673
70.0	2.652673
71.0	2.652673
72.0	2.652673
73.0	2.652673
74.0	2.652673
75.0	2.652673
76.0	2.652673
77.0	2.652673
78.0	2.652673
79.0	2.652673
80.0	2.652673
81.0	2.652673
82.0	2.652673
83.0	2.652673
84.0	2.652673
85.0	2.652673
86.0	2.652673
87.0	2.652673
88.0	2.652673
89.0	2.652673
90.0	2.652673
91.0	2.652673
92.0	2.652673
93.0	2.652673
94.0	2.652673
95.0	2.652673
96.0	2.652673
97.0	2.652673
98.0	2.652673
99.0	2.652673
100.0	2.652673