## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[36_A2P032_ARV_CD8M-ATAC-GSM8224631.2x36mers.Macaca_nemestrina-Mnem_1.0.unique.bam] OUTPUT=36_A2P032_ARV_CD8M-ATAC-GSM8224631.2x36mers.Macaca_nemestrina-Mnem_1.0.unique.dedup.bam METRICS_FILE=36_A2P032_ARV_CD8M-ATAC-GSM8224631.2x36mers.Macaca_nemestrina-Mnem_1.0.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Oct 08 01:43:44 PDT 2024

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	70486343	0	0	36910736	0	0.523658	40850771

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.178091
3.0	1.209808
4.0	1.215456
5.0	1.216462
6.0	1.216641
7.0	1.216673
8.0	1.216679
9.0	1.21668
10.0	1.21668
11.0	1.21668
12.0	1.21668
13.0	1.21668
14.0	1.21668
15.0	1.21668
16.0	1.21668
17.0	1.21668
18.0	1.21668
19.0	1.21668
20.0	1.21668
21.0	1.21668
22.0	1.21668
23.0	1.21668
24.0	1.21668
25.0	1.21668
26.0	1.21668
27.0	1.21668
28.0	1.21668
29.0	1.21668
30.0	1.21668
31.0	1.21668
32.0	1.21668
33.0	1.21668
34.0	1.21668
35.0	1.21668
36.0	1.21668
37.0	1.21668
38.0	1.21668
39.0	1.21668
40.0	1.21668
41.0	1.21668
42.0	1.21668
43.0	1.21668
44.0	1.21668
45.0	1.21668
46.0	1.21668
47.0	1.21668
48.0	1.21668
49.0	1.21668
50.0	1.21668
51.0	1.21668
52.0	1.21668
53.0	1.21668
54.0	1.21668
55.0	1.21668
56.0	1.21668
57.0	1.21668
58.0	1.21668
59.0	1.21668
60.0	1.21668
61.0	1.21668
62.0	1.21668
63.0	1.21668
64.0	1.21668
65.0	1.21668
66.0	1.21668
67.0	1.21668
68.0	1.21668
69.0	1.21668
70.0	1.21668
71.0	1.21668
72.0	1.21668
73.0	1.21668
74.0	1.21668
75.0	1.21668
76.0	1.21668
77.0	1.21668
78.0	1.21668
79.0	1.21668
80.0	1.21668
81.0	1.21668
82.0	1.21668
83.0	1.21668
84.0	1.21668
85.0	1.21668
86.0	1.21668
87.0	1.21668
88.0	1.21668
89.0	1.21668
90.0	1.21668
91.0	1.21668
92.0	1.21668
93.0	1.21668
94.0	1.21668
95.0	1.21668
96.0	1.21668
97.0	1.21668
98.0	1.21668
99.0	1.21668
100.0	1.21668