#!/bin/bash
#SBATCH --job-name=zM5P-1
#SBATCH --output=zM5P.1.out
#SBATCH --error=zM5P.1.err
#SBATCH --time=24:00:00
#SBATCH -p akundaje,sfgf,wjg,normal,owners
#SBATCH --cpus-per-task=1
#SBATCH --mem=40000
#SBATCH -C NO_GPU
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t SK-L027-HEK293T-KAS_ATAC_input-600k_5uM_Kethoxal_input.2x36mers.hg38-female.unique.dedup.bam -n SK-L027-HEK293T-KAS_ATAC_input-600k_5uM_Kethoxal_input.2x36mers.hg38-female.unique.dedup.MACS2-PE -g hs -f BAMPE --to-large --keep-dup all --nomodel