python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL289_b18_RNA_lungredo2.T175_b18_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL289_b18_RNA_lungredo2.T175_b18_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL289_b18_RNA_lungredo2.T198_b18_Lung_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL289_b18_RNA_lungredo2.T198_b18_Lung_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL289_b18_RNA_lungredo2.T24_b18_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL289_b18_RNA_lungredo2.T24_b18_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL289_b18_RNA_lungredo2.T305_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL289_b18_RNA_lungredo2.T305_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL289_b18_RNA_lungredo2.T333_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL289_b18_RNA_lungredo2.T333_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL289_b18_RNA_lungredo2.T49_b18_Lung_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL289_b18_RNA_lungredo2.T49_b18_Lung_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL289_b18_RNA_lungredo2.T77_b18_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL289_b18_RNA_lungredo2.T77_b18_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL290_b18_RNA_lungredo2.T175_b18_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL290_b18_RNA_lungredo2.T175_b18_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL290_b18_RNA_lungredo2.T198_b18_Lung_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL290_b18_RNA_lungredo2.T198_b18_Lung_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL290_b18_RNA_lungredo2.T24_b18_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL290_b18_RNA_lungredo2.T24_b18_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL290_b18_RNA_lungredo2.T305_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL290_b18_RNA_lungredo2.T305_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL290_b18_RNA_lungredo2.T333_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL290_b18_RNA_lungredo2.T333_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL290_b18_RNA_lungredo2.T49_b18_Lung_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL290_b18_RNA_lungredo2.T49_b18_Lung_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL290_b18_RNA_lungredo2.T77_b18_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL290_b18_RNA_lungredo2.T77_b18_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL313_b19_RNA_skinredo.T11_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL313_b19_RNA_skinredo.T11_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL313_b19_RNA_skinredo.T187_b19_Skin_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL313_b19_RNA_skinredo.T187_b19_Skin_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL313_b19_RNA_skinredo.T299_b19_Scalp_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL313_b19_RNA_skinredo.T299_b19_Scalp_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL313_b19_RNA_skinredo.T408S_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL313_b19_RNA_skinredo.T408S_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL313_b19_RNA_skinredo.T45_b19_Skin_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL313_b19_RNA_skinredo.T45_b19_Skin_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL314_b19_RNA_skinredo.T11_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL314_b19_RNA_skinredo.T11_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL314_b19_RNA_skinredo.T187_b19_Skin_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL314_b19_RNA_skinredo.T187_b19_Skin_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL314_b19_RNA_skinredo.T299_b19_Scalp_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL314_b19_RNA_skinredo.T299_b19_Scalp_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL314_b19_RNA_skinredo.T408S_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL314_b19_RNA_skinredo.T408S_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL314_b19_RNA_skinredo.T45_b19_Skin_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL314_b19_RNA_skinredo.T45_b19_Skin_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL321_b20_RNA_kidneyredo.T108_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL321_b20_RNA_kidneyredo.T108_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL321_b20_RNA_kidneyredo.T181_b20_Kidney_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL321_b20_RNA_kidneyredo.T181_b20_Kidney_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL321_b20_RNA_kidneyredo.T271_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL321_b20_RNA_kidneyredo.T271_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL321_b20_RNA_kidneyredo.T309_b20_Kidney_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL321_b20_RNA_kidneyredo.T309_b20_Kidney_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL321_b20_RNA_kidneyredo.T359_b20_Kidney_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL321_b20_RNA_kidneyredo.T359_b20_Kidney_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL321_b20_RNA_kidneyredo.T373_b20_Kidney_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL321_b20_RNA_kidneyredo.T373_b20_Kidney_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL321_b20_RNA_kidneyredo.T42_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL321_b20_RNA_kidneyredo.T42_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL321_b20_RNA_kidneyredo.T65_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL321_b20_RNA_kidneyredo.T65_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL322_b20_RNA_kidneyredo.T108_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL322_b20_RNA_kidneyredo.T108_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL322_b20_RNA_kidneyredo.T181_b20_Kidney_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL322_b20_RNA_kidneyredo.T181_b20_Kidney_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL322_b20_RNA_kidneyredo.T271_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL322_b20_RNA_kidneyredo.T271_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL322_b20_RNA_kidneyredo.T309_b20_Kidney_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL322_b20_RNA_kidneyredo.T309_b20_Kidney_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL322_b20_RNA_kidneyredo.T359_b20_Kidney_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL322_b20_RNA_kidneyredo.T359_b20_Kidney_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL322_b20_RNA_kidneyredo.T373_b20_Kidney_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL322_b20_RNA_kidneyredo.T373_b20_Kidney_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL322_b20_RNA_kidneyredo.T42_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL322_b20_RNA_kidneyredo.T42_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL322_b20_RNA_kidneyredo.T65_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL322_b20_RNA_kidneyredo.T65_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL289_b18_RNA_lungredo2.T175_b18_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL289_b18_RNA_lungredo2.T175_b18_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL289_b18_RNA_lungredo2.T198_b18_Lung_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL289_b18_RNA_lungredo2.T198_b18_Lung_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL289_b18_RNA_lungredo2.T24_b18_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL289_b18_RNA_lungredo2.T24_b18_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL289_b18_RNA_lungredo2.T305_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL289_b18_RNA_lungredo2.T305_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL289_b18_RNA_lungredo2.T333_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL289_b18_RNA_lungredo2.T333_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL289_b18_RNA_lungredo2.T49_b18_Lung_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL289_b18_RNA_lungredo2.T49_b18_Lung_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL289_b18_RNA_lungredo2.T77_b18_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL289_b18_RNA_lungredo2.T77_b18_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL290_b18_RNA_lungredo2.T175_b18_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL290_b18_RNA_lungredo2.T175_b18_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL290_b18_RNA_lungredo2.T198_b18_Lung_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL290_b18_RNA_lungredo2.T198_b18_Lung_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL290_b18_RNA_lungredo2.T24_b18_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL290_b18_RNA_lungredo2.T24_b18_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL290_b18_RNA_lungredo2.T305_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL290_b18_RNA_lungredo2.T305_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL290_b18_RNA_lungredo2.T333_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL290_b18_RNA_lungredo2.T333_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL290_b18_RNA_lungredo2.T49_b18_Lung_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL290_b18_RNA_lungredo2.T49_b18_Lung_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL290_b18_RNA_lungredo2.T77_b18_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL290_b18_RNA_lungredo2.T77_b18_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL313_b19_RNA_skinredo.T11_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL313_b19_RNA_skinredo.T11_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL313_b19_RNA_skinredo.T187_b19_Skin_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL313_b19_RNA_skinredo.T187_b19_Skin_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL313_b19_RNA_skinredo.T299_b19_Scalp_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL313_b19_RNA_skinredo.T299_b19_Scalp_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL313_b19_RNA_skinredo.T408S_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL313_b19_RNA_skinredo.T408S_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL313_b19_RNA_skinredo.T45_b19_Skin_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL313_b19_RNA_skinredo.T45_b19_Skin_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL314_b19_RNA_skinredo.T11_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL314_b19_RNA_skinredo.T11_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL314_b19_RNA_skinredo.T187_b19_Skin_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL314_b19_RNA_skinredo.T187_b19_Skin_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL314_b19_RNA_skinredo.T299_b19_Scalp_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL314_b19_RNA_skinredo.T299_b19_Scalp_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL314_b19_RNA_skinredo.T408S_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL314_b19_RNA_skinredo.T408S_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL314_b19_RNA_skinredo.T45_b19_Skin_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL314_b19_RNA_skinredo.T45_b19_Skin_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL321_b20_RNA_kidneyredo.T108_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL321_b20_RNA_kidneyredo.T108_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL321_b20_RNA_kidneyredo.T181_b20_Kidney_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL321_b20_RNA_kidneyredo.T181_b20_Kidney_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL321_b20_RNA_kidneyredo.T271_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL321_b20_RNA_kidneyredo.T271_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL321_b20_RNA_kidneyredo.T309_b20_Kidney_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL321_b20_RNA_kidneyredo.T309_b20_Kidney_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL321_b20_RNA_kidneyredo.T359_b20_Kidney_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL321_b20_RNA_kidneyredo.T359_b20_Kidney_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL321_b20_RNA_kidneyredo.T373_b20_Kidney_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL321_b20_RNA_kidneyredo.T373_b20_Kidney_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL321_b20_RNA_kidneyredo.T42_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL321_b20_RNA_kidneyredo.T42_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL321_b20_RNA_kidneyredo.T65_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL321_b20_RNA_kidneyredo.T65_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL322_b20_RNA_kidneyredo.T108_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL322_b20_RNA_kidneyredo.T108_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL322_b20_RNA_kidneyredo.T181_b20_Kidney_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL322_b20_RNA_kidneyredo.T181_b20_Kidney_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL322_b20_RNA_kidneyredo.T271_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL322_b20_RNA_kidneyredo.T271_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL322_b20_RNA_kidneyredo.T309_b20_Kidney_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL322_b20_RNA_kidneyredo.T309_b20_Kidney_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL322_b20_RNA_kidneyredo.T359_b20_Kidney_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL322_b20_RNA_kidneyredo.T359_b20_Kidney_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL322_b20_RNA_kidneyredo.T373_b20_Kidney_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL322_b20_RNA_kidneyredo.T373_b20_Kidney_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL322_b20_RNA_kidneyredo.T42_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL322_b20_RNA_kidneyredo.T42_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL322_b20_RNA_kidneyredo.T65_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL322_b20_RNA_kidneyredo.T65_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python ~/code/plotting/scatterplot.py SL289_b18_RNA_lungredo2.T175_b18_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL289_b18_RNA_lungredo2.T175_b18_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL289_b18_RNA_lungredo2.T198_b18_Lung_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL289_b18_RNA_lungredo2.T198_b18_Lung_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL289_b18_RNA_lungredo2.T24_b18_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL289_b18_RNA_lungredo2.T24_b18_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL289_b18_RNA_lungredo2.T305_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL289_b18_RNA_lungredo2.T305_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL289_b18_RNA_lungredo2.T333_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL289_b18_RNA_lungredo2.T333_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL289_b18_RNA_lungredo2.T49_b18_Lung_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL289_b18_RNA_lungredo2.T49_b18_Lung_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL289_b18_RNA_lungredo2.T77_b18_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL289_b18_RNA_lungredo2.T77_b18_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL290_b18_RNA_lungredo2.T175_b18_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL290_b18_RNA_lungredo2.T175_b18_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL290_b18_RNA_lungredo2.T198_b18_Lung_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL290_b18_RNA_lungredo2.T198_b18_Lung_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL290_b18_RNA_lungredo2.T24_b18_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL290_b18_RNA_lungredo2.T24_b18_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL290_b18_RNA_lungredo2.T305_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL290_b18_RNA_lungredo2.T305_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL290_b18_RNA_lungredo2.T333_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL290_b18_RNA_lungredo2.T333_b18_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL290_b18_RNA_lungredo2.T49_b18_Lung_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL290_b18_RNA_lungredo2.T49_b18_Lung_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL290_b18_RNA_lungredo2.T77_b18_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL290_b18_RNA_lungredo2.T77_b18_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL313_b19_RNA_skinredo.T11_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL313_b19_RNA_skinredo.T11_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL313_b19_RNA_skinredo.T187_b19_Skin_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL313_b19_RNA_skinredo.T187_b19_Skin_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL313_b19_RNA_skinredo.T299_b19_Scalp_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL313_b19_RNA_skinredo.T299_b19_Scalp_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL313_b19_RNA_skinredo.T408S_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL313_b19_RNA_skinredo.T408S_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL313_b19_RNA_skinredo.T45_b19_Skin_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL313_b19_RNA_skinredo.T45_b19_Skin_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL314_b19_RNA_skinredo.T11_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL314_b19_RNA_skinredo.T11_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL314_b19_RNA_skinredo.T187_b19_Skin_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL314_b19_RNA_skinredo.T187_b19_Skin_PCW23.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL314_b19_RNA_skinredo.T299_b19_Scalp_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL314_b19_RNA_skinredo.T299_b19_Scalp_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL314_b19_RNA_skinredo.T408S_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL314_b19_RNA_skinredo.T408S_b19_Skin_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL314_b19_RNA_skinredo.T45_b19_Skin_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL314_b19_RNA_skinredo.T45_b19_Skin_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL321_b20_RNA_kidneyredo.T108_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL321_b20_RNA_kidneyredo.T108_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL321_b20_RNA_kidneyredo.T181_b20_Kidney_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL321_b20_RNA_kidneyredo.T181_b20_Kidney_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL321_b20_RNA_kidneyredo.T271_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL321_b20_RNA_kidneyredo.T271_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL321_b20_RNA_kidneyredo.T309_b20_Kidney_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL321_b20_RNA_kidneyredo.T309_b20_Kidney_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL321_b20_RNA_kidneyredo.T359_b20_Kidney_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL321_b20_RNA_kidneyredo.T359_b20_Kidney_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL321_b20_RNA_kidneyredo.T373_b20_Kidney_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL321_b20_RNA_kidneyredo.T373_b20_Kidney_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL321_b20_RNA_kidneyredo.T42_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL321_b20_RNA_kidneyredo.T42_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL321_b20_RNA_kidneyredo.T65_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL321_b20_RNA_kidneyredo.T65_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL322_b20_RNA_kidneyredo.T108_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL322_b20_RNA_kidneyredo.T108_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL322_b20_RNA_kidneyredo.T181_b20_Kidney_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL322_b20_RNA_kidneyredo.T181_b20_Kidney_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL322_b20_RNA_kidneyredo.T271_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL322_b20_RNA_kidneyredo.T271_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL322_b20_RNA_kidneyredo.T309_b20_Kidney_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL322_b20_RNA_kidneyredo.T309_b20_Kidney_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL322_b20_RNA_kidneyredo.T359_b20_Kidney_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL322_b20_RNA_kidneyredo.T359_b20_Kidney_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL322_b20_RNA_kidneyredo.T373_b20_Kidney_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL322_b20_RNA_kidneyredo.T373_b20_Kidney_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL322_b20_RNA_kidneyredo.T42_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL322_b20_RNA_kidneyredo.T42_b20_Kidney_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL322_b20_RNA_kidneyredo.T65_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL322_b20_RNA_kidneyredo.T65_b20_Kidney_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &