python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL182_b13_ATAC_EyeRedo.T106_b13_Eye_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T106_b13_Eye_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL182_b13_ATAC_EyeRedo.T180_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T180_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL182_b13_ATAC_EyeRedo.T186_b13_Eye_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T186_b13_Eye_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL182_b13_ATAC_EyeRedo.T410_b13_Eye_PCW13.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T410_b13_Eye_PCW13.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL182_b13_ATAC_EyeRedo.T51_b13_Eye_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T51_b13_Eye_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL182_b13_ATAC_EyeRedo.T5_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T5_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL182_b13_ATAC_EyeRedo.T79_b13_Eye_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T79_b13_Eye_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL159_b12_ATAC_LungRedo.T107_b12_Lung_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL159_b12_ATAC_LungRedo.T107_b12_Lung_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL159_b12_ATAC_LungRedo.T132_b12_lung_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL159_b12_ATAC_LungRedo.T132_b12_lung_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL159_b12_ATAC_LungRedo.T164_b12_Lung_PCW10.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL159_b12_ATAC_LungRedo.T164_b12_Lung_PCW10.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL159_b12_ATAC_LungRedo.T226_b12_Lung_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL159_b12_ATAC_LungRedo.T226_b12_Lung_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL159_b12_ATAC_LungRedo.T256_b12_Lung_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL159_b12_ATAC_LungRedo.T256_b12_Lung_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL159_b12_ATAC_LungRedo.T286_b12_Lung_PCW14.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL159_b12_ATAC_LungRedo.T286_b12_Lung_PCW14.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL159_b12_ATAC_LungRedo.T304_b12_Lung_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL159_b12_ATAC_LungRedo.T304_b12_Lung_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL159_b12_ATAC_LungRedo.T408L_b12_Lung_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL159_b12_ATAC_LungRedo.T408L_b12_Lung_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL122_b10_ATAC_StomachEsophagus.T238_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T238_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL122_b10_ATAC_StomachEsophagus.T269_b10_Stomach_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T269_b10_Stomach_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL122_b10_ATAC_StomachEsophagus.T303_b10_Esophagus_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T303_b10_Esophagus_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL122_b10_ATAC_StomachEsophagus.T322_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T322_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL122_b10_ATAC_StomachEsophagus.T35_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T35_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL122_b10_ATAC_StomachEsophagus.T399_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T399_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL122_b10_ATAC_StomachEsophagus.T53_b10_Stomach_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T53_b10_Stomach_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL182_b13_ATAC_EyeRedo.T106_b13_Eye_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T106_b13_Eye_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL182_b13_ATAC_EyeRedo.T180_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T180_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL182_b13_ATAC_EyeRedo.T186_b13_Eye_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T186_b13_Eye_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL182_b13_ATAC_EyeRedo.T410_b13_Eye_PCW13.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T410_b13_Eye_PCW13.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL182_b13_ATAC_EyeRedo.T51_b13_Eye_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T51_b13_Eye_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL182_b13_ATAC_EyeRedo.T5_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T5_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL182_b13_ATAC_EyeRedo.T79_b13_Eye_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T79_b13_Eye_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL159_b12_ATAC_LungRedo.T107_b12_Lung_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL159_b12_ATAC_LungRedo.T107_b12_Lung_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL159_b12_ATAC_LungRedo.T132_b12_lung_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL159_b12_ATAC_LungRedo.T132_b12_lung_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL159_b12_ATAC_LungRedo.T164_b12_Lung_PCW10.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL159_b12_ATAC_LungRedo.T164_b12_Lung_PCW10.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL159_b12_ATAC_LungRedo.T226_b12_Lung_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL159_b12_ATAC_LungRedo.T226_b12_Lung_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL159_b12_ATAC_LungRedo.T256_b12_Lung_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL159_b12_ATAC_LungRedo.T256_b12_Lung_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL159_b12_ATAC_LungRedo.T286_b12_Lung_PCW14.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL159_b12_ATAC_LungRedo.T286_b12_Lung_PCW14.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL159_b12_ATAC_LungRedo.T304_b12_Lung_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL159_b12_ATAC_LungRedo.T304_b12_Lung_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL159_b12_ATAC_LungRedo.T408L_b12_Lung_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL159_b12_ATAC_LungRedo.T408L_b12_Lung_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL122_b10_ATAC_StomachEsophagus.T238_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T238_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL122_b10_ATAC_StomachEsophagus.T269_b10_Stomach_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T269_b10_Stomach_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL122_b10_ATAC_StomachEsophagus.T303_b10_Esophagus_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T303_b10_Esophagus_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL122_b10_ATAC_StomachEsophagus.T322_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T322_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL122_b10_ATAC_StomachEsophagus.T35_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T35_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL122_b10_ATAC_StomachEsophagus.T399_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T399_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL122_b10_ATAC_StomachEsophagus.T53_b10_Stomach_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T53_b10_Stomach_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL182_b13_ATAC_EyeRedo.T106_b13_Eye_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL182_b13_ATAC_EyeRedo.T106_b13_Eye_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL182_b13_ATAC_EyeRedo.T180_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL182_b13_ATAC_EyeRedo.T180_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL182_b13_ATAC_EyeRedo.T186_b13_Eye_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL182_b13_ATAC_EyeRedo.T186_b13_Eye_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL182_b13_ATAC_EyeRedo.T410_b13_Eye_PCW13.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL182_b13_ATAC_EyeRedo.T410_b13_Eye_PCW13.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL182_b13_ATAC_EyeRedo.T51_b13_Eye_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL182_b13_ATAC_EyeRedo.T51_b13_Eye_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL182_b13_ATAC_EyeRedo.T5_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL182_b13_ATAC_EyeRedo.T5_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL182_b13_ATAC_EyeRedo.T79_b13_Eye_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL182_b13_ATAC_EyeRedo.T79_b13_Eye_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL159_b12_ATAC_LungRedo.T107_b12_Lung_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL159_b12_ATAC_LungRedo.T107_b12_Lung_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL159_b12_ATAC_LungRedo.T132_b12_lung_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL159_b12_ATAC_LungRedo.T132_b12_lung_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL159_b12_ATAC_LungRedo.T164_b12_Lung_PCW10.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL159_b12_ATAC_LungRedo.T164_b12_Lung_PCW10.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL159_b12_ATAC_LungRedo.T226_b12_Lung_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL159_b12_ATAC_LungRedo.T226_b12_Lung_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL159_b12_ATAC_LungRedo.T256_b12_Lung_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL159_b12_ATAC_LungRedo.T256_b12_Lung_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL159_b12_ATAC_LungRedo.T286_b12_Lung_PCW14.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL159_b12_ATAC_LungRedo.T286_b12_Lung_PCW14.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL159_b12_ATAC_LungRedo.T304_b12_Lung_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL159_b12_ATAC_LungRedo.T304_b12_Lung_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL159_b12_ATAC_LungRedo.T408L_b12_Lung_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL159_b12_ATAC_LungRedo.T408L_b12_Lung_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL122_b10_ATAC_StomachEsophagus.T238_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL122_b10_ATAC_StomachEsophagus.T238_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL122_b10_ATAC_StomachEsophagus.T269_b10_Stomach_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL122_b10_ATAC_StomachEsophagus.T269_b10_Stomach_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL122_b10_ATAC_StomachEsophagus.T303_b10_Esophagus_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL122_b10_ATAC_StomachEsophagus.T303_b10_Esophagus_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL122_b10_ATAC_StomachEsophagus.T322_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL122_b10_ATAC_StomachEsophagus.T322_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL122_b10_ATAC_StomachEsophagus.T35_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL122_b10_ATAC_StomachEsophagus.T35_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL122_b10_ATAC_StomachEsophagus.T399_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL122_b10_ATAC_StomachEsophagus.T399_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL122_b10_ATAC_StomachEsophagus.T53_b10_Stomach_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL122_b10_ATAC_StomachEsophagus.T53_b10_Stomach_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL187_b14_ATAC_Skin.T109_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T109_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL187_b14_ATAC_Skin.T11_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T11_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL187_b14_ATAC_Skin.T178_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T178_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL187_b14_ATAC_Skin.T187_b14_Skin_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T187_b14_Skin_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL187_b14_ATAC_Skin.T408S_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T408S_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL187_b14_ATAC_Skin.T45_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T45_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL187_b14_ATAC_Skin.T60_b14_Skin_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T60_b14_Skin_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL187_b14_ATAC_Skin.T85_b14_Skin_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T85_b14_Skin_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL187_b14_ATAC_Skin.T109_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL187_b14_ATAC_Skin.T109_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL187_b14_ATAC_Skin.T11_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL187_b14_ATAC_Skin.T11_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL187_b14_ATAC_Skin.T178_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL187_b14_ATAC_Skin.T178_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL187_b14_ATAC_Skin.T187_b14_Skin_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL187_b14_ATAC_Skin.T187_b14_Skin_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL187_b14_ATAC_Skin.T408S_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL187_b14_ATAC_Skin.T408S_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL187_b14_ATAC_Skin.T45_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL187_b14_ATAC_Skin.T45_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL187_b14_ATAC_Skin.T60_b14_Skin_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL187_b14_ATAC_Skin.T60_b14_Skin_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL187_b14_ATAC_Skin.T85_b14_Skin_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL187_b14_ATAC_Skin.T85_b14_Skin_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL187_b14_ATAC_Skin.T109_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T109_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL187_b14_ATAC_Skin.T11_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T11_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL187_b14_ATAC_Skin.T178_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T178_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL187_b14_ATAC_Skin.T187_b14_Skin_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T187_b14_Skin_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL187_b14_ATAC_Skin.T408S_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T408S_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL187_b14_ATAC_Skin.T45_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T45_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL187_b14_ATAC_Skin.T60_b14_Skin_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T60_b14_Skin_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL187_b14_ATAC_Skin.T85_b14_Skin_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T85_b14_Skin_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &