zcat SL1_b1_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL1_b1_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL2_b1_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL2_b1_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL3_b1_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL3_b1_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL4_b1_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL4_b1_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL5_b1_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL5_b1_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL6_b1_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL6_b1_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL7_b1_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL7_b1_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL8_b1_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL8_b1_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL9_b2_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL9_b2_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL10_b2_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL10_b2_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL11_b2_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL11_b2_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL12_b2_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL12_b2_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL13_b2_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL13_b2_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL14_b2_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL14_b2_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL15_b2_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL15_b2_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL16_b2_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL16_b2_ATAC_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL17_b1_RNA_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL17_b1_RNA_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL18_b1_RNA_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL18_b1_RNA_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL19_b1_RNA_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL19_b1_RNA_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL20_b1_RNA_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL20_b1_RNA_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL21_b1_RNA_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL21_b1_RNA_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL22_b1_RNA_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL22_b1_RNA_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL23_b1_RNA_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL23_b1_RNA_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL24_b1_RNA_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL24_b1_RNA_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL25_b2_RNA_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL25_b2_RNA_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL26_b2_RNA_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL26_b2_RNA_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL27_b2_RNA_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL27_b2_RNA_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL28_b2_RNA_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL28_b2_RNA_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL29_b2_RNA_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL29_b2_RNA_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL30_b2_RNA_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL30_b2_RNA_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL31_b2_RNA_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL31_b2_RNA_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts
zcat SL32_b2_RNA_lung.220920_A00509_0608_AHNT5JDSX3.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL32_b2_RNA_lung.220920_A00509_0608_AHNT5JDSX3.nan_counts