Index of /kundaje/marinovg/oak/ENCODE4/single-cell/2022-03-17-NextSeq-run-vervet-mangabey

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]220317_NB551514_0750_AHTGY7BGXK.zip---moved-to-wjg-seqruns2022-04-05 23:00 16K 
[TXT]ATACTSSscore.txt2022-03-19 21:08 536  
[ ]Cercocebus_atys-Caty_1.0+Chlorocebus_sabaeus-Vero_WHO_p1.0.chrM.blastn2022-03-18 16:56 35K 
[ ]Cercocebus_atys.chrom.sizes2022-03-18 16:39 348K 
[ ]Chlorocebus_sabaeus.chrom.sizes2022-03-18 16:39 237K 
[ ]SAMstats-SK-L308-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_ATAC_20k_3.2x30mers.Cercocebus_atys-Caty_1.0+Chlorocebus_sabaeus-Vero_WHO_p1.0.unique.Cercocebus_atys-Caty_1.02022-03-19 20:22 155  
[ ]SAMstats-SK-L308-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_ATAC_20k_3.2x30mers.Cercocebus_atys-Caty_1.0+Chlorocebus_sabaeus-Vero_WHO_p1.0.unique.Chlorocebus_sabaeus-Vero_WHO_p1.02022-03-19 20:19 155  
[ ]SAMstats-SK-L308-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_ATAC_20k_3.2x30mers.Cercocebus_atys-Caty_1.0.BC_dedup2022-03-21 03:21 155  
[ ]SAMstats-SK-L308-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_ATAC_20k_3.2x30mers.Chlorocebus_sabaeus-Vero_WHO_p1.0.BC_dedup2022-03-21 03:27 155  
[ ]SAMstats-SK-L316-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_RNA_20k_3.end1.Cercocebus_atys-Caty_1.0-STAR-2.5.3a.Cercocebus_atys-Caty_1.02022-03-19 20:30 182  
[ ]SAMstats-SK-L316-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_RNA_20k_3.end1.Chlorocebus_sabaeus-Vero_WHO_p1.0+Cercocebus_atys-Caty_1.0-STAR-2.5.3a.Chlorocebus_sabaeus-Vero_WHO_p1.02022-03-19 20:55 182  
[TXT]SHARE-seq_RNA_counts.sh2022-03-19 19:48 971K 
[ ]SK-L308-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_ATAC_20k_3.2x30mers.Cercocebus_atys-Caty_1.0.BC_dedup.per_cell_stats.fragments_eCDF2022-03-21 03:14 4.8K 
[ ]SK-L308-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_ATAC_20k_3.2x30mers.Cercocebus_atys-Caty_1.0.BC_dedup.per_cell_stats.fragments_hist2022-03-21 03:14 85  
[IMG]SK-L308-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_ATAC_20k_3.2x30mers.Cercocebus_atys-Caty_1.0.fragments_vs_rank_scatter_log10.png2022-03-21 03:22 90K 
[IMG]SK-L308-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_ATAC_20k_3.2x30mers.Cercocebus_atys-Caty_1.0.unique.BC_dedup.TSS_score_vs_fragments.png2022-03-21 03:22 491K 
[ ]SK-L308-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_ATAC_20k_3.2x30mers.Chlorocebus_sabaeus-Vero_WHO_p1.0.BC_dedup.per_cell_stats.fragments_eCDF2022-03-21 03:14 4.8K 
[ ]SK-L308-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_ATAC_20k_3.2x30mers.Chlorocebus_sabaeus-Vero_WHO_p1.0.BC_dedup.per_cell_stats.fragments_hist2022-03-21 03:14 84  
[IMG]SK-L308-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_ATAC_20k_3.2x30mers.Chlorocebus_sabaeus-Vero_WHO_p1.0.fragments_vs_rank_scatter_log10.png2022-03-21 03:22 84K 
[IMG]SK-L308-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_ATAC_20k_3.2x30mers.Chlorocebus_sabaeus-Vero_WHO_p1.0.unique.BC_dedup.TSS_score_vs_fragments.png2022-03-21 03:22 524K 
[ ]SK-L308-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_ATAC_20k_3.per_cell_stats.files2022-03-21 03:25 347  
[ ]SK-L308-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_ATAC_20k_3.per_cell_stats.min200_either.table2022-03-21 03:26 384K 
[ ]SK-L308-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_ATAC_20k_3.per_cell_stats.table2022-03-21 03:25 29M 
[ ]SK-L316-Cercocebus_atys-Caty_1.0.UMIs_per_cell.fragments_eCDF2022-03-21 02:49 4.8K 
[ ]SK-L316-Cercocebus_atys-Caty_1.0.UMIs_per_cell.fragments_hist2022-03-21 02:49 92  
[IMG]SK-L316-Cercocebus_atys-Caty_1.0.UMIs_vs_rank_scatter_log10.png2022-03-21 03:15 97K 
[TXT]SK-L316-Cercocebus_atys-Caty_1.0.table.min200.sparse.barcodes_Mangabey_Cerebellum.tsv2022-03-21 04:36 41K 
[TXT]SK-L316-Cercocebus_atys-Caty_1.0.table.min200.sparse.barcodes_Mangabey_Frontal_Cortex.tsv2022-03-21 04:36 30K 
[TXT]SK-L316-Cercocebus_atys-Caty_1.0.table.min200.sparse.barcodes_Vervet_Cerebellum.tsv2022-03-21 04:36 2.2K 
[TXT]SK-L316-Cercocebus_atys-Caty_1.0.table.min200.sparse.barcodes_Vervet_Frontal_Cortex.tsv2022-03-21 04:36 29K 
[TXT]SK-L316-Cercocebus_atys-Caty_1.0.table.min500.sparse.barcodes_Mangabey_Cerebellum.tsv2022-03-21 04:06 2.6K 
[TXT]SK-L316-Cercocebus_atys-Caty_1.0.table.min500.sparse.barcodes_Mangabey_Frontal_Cortex.tsv2022-03-21 04:06 7.1K 
[TXT]SK-L316-Cercocebus_atys-Caty_1.0.table.min500.sparse.barcodes_Vervet_Cerebellum.tsv2022-03-21 04:06 243  
[TXT]SK-L316-Cercocebus_atys-Caty_1.0.table.min500.sparse.barcodes_Vervet_Frontal_Cortex.tsv2022-03-21 04:06 4.4K 
[ ]SK-L316-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_RNA_20k_3.per_cell_stats.files2022-03-21 03:30 146  
[ ]SK-L316-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_RNA_20k_3.per_cell_stats.min200_either.table2022-03-21 03:31 346K 
[ ]SK-L316-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_RNA_20k_3.per_cell_stats.table2022-03-21 03:31 22M 
[ ]SK-L316-Chlorocebus_sabaeus-Vero_WHO_p1.0.UMIs_per_cell.fragments_eCDF2022-03-21 02:49 4.9K 
[ ]SK-L316-Chlorocebus_sabaeus-Vero_WHO_p1.0.UMIs_per_cell.fragments_hist2022-03-21 02:49 98  
[IMG]SK-L316-Chlorocebus_sabaeus-Vero_WHO_p1.0.UMIs_vs_rank_scatter_log10.png2022-03-21 03:15 112K 
[TXT]SK-L316-Chlorocebus_sabaeus-Vero_WHO_p1.0.table.min500.sparse.barcodes_Mangabey_Cerebellum.tsv2022-03-21 04:06 324  
[TXT]SK-L316-Chlorocebus_sabaeus-Vero_WHO_p1.0.table.min500.sparse.barcodes_Mangabey_Frontal_Cortex.tsv2022-03-21 04:06 2.2K 
[TXT]SK-L316-Chlorocebus_sabaeus-Vero_WHO_p1.0.table.min500.sparse.barcodes_Vervet_Cerebellum.tsv2022-03-21 04:06 74K 
[TXT]SK-L316-Chlorocebus_sabaeus-Vero_WHO_p1.0.table.min500.sparse.barcodes_Vervet_Frontal_Cortex.tsv2022-03-21 04:06 63K 
[ ]SampleSheet-SHARE-seq-1.config2022-03-18 16:25 399  
[ ]SampleSheet-SHARE-seq-2.config2022-03-18 16:25 399  
[ ]SampleSheet-SHARE-seq-3.config2022-03-18 17:26 399  
[ ]SampleSheet-SHARE-seq-4.config2022-03-18 17:26 399  
[ ]all.220317_NB551514_0750_AHTGY7BGXK.fastq.lines2022-03-18 17:21 11  
[ ]barcodes_Mangabey_Cerebellum2022-03-21 03:58 556  
[ ]barcodes_Mangabey_Frontal_Cortex2022-03-21 03:57 556  
[ ]barcodes_Vervet_Cerebellum2022-03-21 03:58 580  
[ ]barcodes_Vervet_Frontal_Cortex2022-03-21 03:58 556  
[ ]coverage-SK-L316-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_RNA_20k_3.end1.Cercocebus_atys-Caty_1.0-STAR-2.5.3a.Cercocebus_atys-Caty_1.02022-03-20 02:25 2.3K 
[ ]coverage-SK-L316-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_RNA_20k_3.end1.Chlorocebus_sabaeus-Vero_WHO_p1.0+Cercocebus_atys-Caty_1.0-STAR-2.5.3a.Chlorocebus_sabaeus-Vero_WHO_p1.02022-03-20 02:28 2.2K 
[ ]old_to_news_Cercocebus_atys2022-03-18 14:29 458K 
[ ]old_to_news_Chlorocebus_sabaeus2022-03-18 14:31 302K 
[ ]sam_reads_genes-SK-L316-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_RNA_20k_3.end1.Cercocebus_atys-Caty_1.0-STAR-2.5.3a.Cercocebus_atys-Caty_1.02022-03-19 22:09 92  
[ ]sam_reads_genes-SK-L316-Cercocebus_torquatus_Chlorocebus_pygerythrus-FrontalCortex_Cerebellum_RNA_20k_3.end1.Chlorocebus_sabaeus-Vero_WHO_p1.0+Cercocebus_atys-Caty_1.0-STAR-2.5.3a.Chlorocebus_sabaeus-Vero_WHO_p1.02022-03-19 22:45 91  
[ ]z2022-03-21 03:57 139K 
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