## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1636-Bigelowiella_natans_SMAC_EM-seq.bwameth.2x36mers.lambda.bam] OUTPUT=L1636-Bigelowiella_natans_SMAC_EM-seq.bwameth.2x36mers.lambda.dedup.bam METRICS_FILE=L1636-Bigelowiella_natans_SMAC_EM-seq.bwameth.2x36mers.lambda.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Apr 16 04:41:28 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
	0	280072	0	0	27876	9100	0.099532	1863903

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.031125
2.0	1.91839
3.0	2.681868
4.0	3.338827
5.0	3.90413
6.0	4.390564
7.0	4.809131
8.0	5.169302
9.0	5.479223
10.0	5.745905
11.0	5.97538
12.0	6.17284
13.0	6.342751
14.0	6.488956
15.0	6.614763
16.0	6.723018
17.0	6.81617
18.0	6.896325
19.0	6.965298
20.0	7.024647
21.0	7.075717
22.0	7.119661
23.0	7.157474
24.0	7.190012
25.0	7.21801
26.0	7.242102
27.0	7.262833
28.0	7.280672
29.0	7.296021
30.0	7.309229
31.0	7.320595
32.0	7.330375
33.0	7.33879
34.0	7.346031
35.0	7.352262
36.0	7.357624
37.0	7.362237
38.0	7.366207
39.0	7.369623
40.0	7.372563
41.0	7.375092
42.0	7.377269
43.0	7.379141
44.0	7.380753
45.0	7.38214
46.0	7.383333
47.0	7.38436
48.0	7.385243
49.0	7.386003
50.0	7.386657
51.0	7.38722
52.0	7.387705
53.0	7.388122
54.0	7.38848
55.0	7.388789
56.0	7.389054
57.0	7.389283
58.0	7.389479
59.0	7.389649
60.0	7.389794
61.0	7.38992
62.0	7.390027
63.0	7.39012
64.0	7.3902
65.0	7.390269
66.0	7.390328
67.0	7.390379
68.0	7.390422
69.0	7.39046
70.0	7.390492
71.0	7.39052
72.0	7.390544
73.0	7.390565
74.0	7.390583
75.0	7.390598
76.0	7.390611
77.0	7.390622
78.0	7.390632
79.0	7.39064
80.0	7.390648
81.0	7.390654
82.0	7.390659
83.0	7.390664
84.0	7.390668
85.0	7.390671
86.0	7.390674
87.0	7.390677
88.0	7.390679
89.0	7.390681
90.0	7.390682
91.0	7.390684
92.0	7.390685
93.0	7.390686
94.0	7.390687
95.0	7.390687
96.0	7.390688
97.0	7.390689
98.0	7.390689
99.0	7.39069
100.0	7.39069