## htsjdk.samtools.metrics.StringHeader
# CollectQualityYieldMetricsFlow INCLUDE_BQ_HISTOGRAM=true INPUT=/Ddata/Runs/441525/output/441525-20260312_0210/441525-L5421-Z0123-CAGATCGCCACAGAT/441525-L5421-Z0123-CAGATCGCCACAGAT_sample.sam.gz OUTPUT=/Ddata/Runs/441525/output/441525-20260312_0210/441525-L5421-Z0123-CAGATCGCCACAGAT/441525-L5421-Z0123-CAGATCGCCACAGAT_FlowQ.metric    INCLUDE_SECONDARY_ALIGNMENTS=false INCLUDE_SUPPLEMENTAL_ALIGNMENTS=false IGNORET0TAG=false FILLINGVALUE=0.0 KEEPBOUNDARYFLOWS=false ASSUME_SORTED=true STOP_AFTER=0 VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false USE_JDK_DEFLATER=false USE_JDK_INFLATER=false
## htsjdk.samtools.metrics.StringHeader
# Started on: Fri Mar 13 02:52:17 EDT 2026

## METRICS CLASS	picard.analysis.CollectQualityYieldMetricsFlow$QualityYieldMetricsFlow
TOTAL_READS	PF_READS	MEAN_READ_LENGTH_IN_FLOWS	PF_FLOWS	PF_Q20_FLOWS	PCT_PF_Q20_FLOWS	PF_Q30_FLOWS	PCT_PF_Q30_FLOWS	Q20_EQUIVALENT_YIELD	PF_Q20_EQUIVALENT_YIELD
999945	999945	204	204750163	171581039	0.838002	140839390	0.68786	302227743	302227743

## HISTOGRAM	java.lang.Integer
KEY	QUAL_COUNT	MEAN_CYCLE_QUAL	MEDIAN_CYCLE_QUAL	Q25_CYCLE_QUAL	Q75_CYCLE_QUAL
0	2031664	26.237742	26.25	26.25	26.25
1	204659	34.297632	35	34.25	35
2	4194	34.53535	35	34.25	35
3	1215129	34.114194	35	34.25	35
4	7925	31.419052	31.75	30	33.5
5	9566	34.636065	35	35	35
6	2782640	33.163756	34.25	32.5	35
7	11311	32.433678	33.75	30.5	35
8	15585	33.305032	33.75	32.5	35
9	4818324	33.557781	34.25	32.5	35
10	7128	34.200814	35	34.25	35
11	15524	32.487037	33.75	31.75	35
12	5923074	32.819883	35	32.5	35
13	37888	32.706305	35	31.75	35
14	611333	32.800844	35	32.5	35
15	4404744	32.745153	35	32.25	35
16	606363	32.857911	35	32.5	35
17	5010214	32.765736	35	32.5	35
18	144	32.741863	35	32.5	35
19	5451715	32.722691	35	32.25	35
20	281000	32.659899	35	31.75	35
21	302746	32.594574	35	31.75	35
22	3251109	32.381654	35	31.75	35
23	0	32.141136	34.25	31.75	35
24	32785	31.71111	34.25	31	35
25	26126517	31.006371	34.25	30	35
26	0	30.712689	34.25	29.75	35
27	25	30.116177	33.75	28.5	35
28	206217	29.500221	33.75	27	35
29	541250	28.89153	33.5	25	35
30	5118963	28.348988	33	23	35
31	0	27.823848	32.5	21	35
32	9085432	27.296299	31.75	19.75	35
33	0	26.852257	31	19	35
34	0	26.530518	30	18.5	35
35	126634995	26.223654	29.25	18.5	35
36	0	26.058747	27.75	18.5	35
37	0	25.762369	27	18.25	34.25
38	0	25.635478	26	18.25	34.25
39	0	25.426493	25.25	18	34.25
40	0	25.179671	25	17.75	34.25
41	0	25.03624	25	17.75	34.25
42	0	24.845852	25	17.5	33.75
43	0	24.736135	25	17.5	33.75
44	0	24.668467	25	17.25	33.75
45	0	24.622198	25	17.25	33.75
46	0	24.617116	25	17.25	33.75
47	0	24.682166	25	17.25	33.75
48	0	24.767015	25	17.25	33.75
49	0	24.786916	25	17.5	33.75
50	0	24.814673	25	17.75	33.75
51	0	24.767891	25	17.75	33.75
52	0	24.770492	25	17.75	33.75
53	0	24.613285	25	17.75	33.75
54	0	24.469866	25	17.5	33.75
55	0	24.287531	25	17.25	33.5
56	0	24.334373	25	17.5	33.5
57	0	24.243908	25	17.5	33
58	0	24.264005	25	17.75	32.5
59	0	24.158247	25	17.75	32.5
60	0	24.051693	25	17.75	32.5
61	0	24.017056	25	18	31.75
62	0	23.97543	25	18	31.75
63	0	23.982303	25	18.5	31.25
64	0	24.057321	25	18.75	30.75
65	0	24.08211	25	18.75	30.25
66	0	24.13453	25	19	30
67	0	24.14637	25	19	30
68	0	24.181819	25	19	30
69	0	24.226417	25	19.25	30
70	0	24.246252	25	19.5	30
71	0	24.288771	25	19.75	30
72	0	24.271451	25	19.5	30
73	0	24.218867	25	19.75	30
74	0	24.227163	25	19.75	30
75	0	24.058803	25	19.25	30
76	0	23.941108	25	19	30
77	0	23.662915	25	18.25	30
78	0	23.470493	25	17.75	30
79	0	23.359196	25	17.25	30
80	0	23.350374	25	17.25	30
81	0	23.433093	25	17.5	30
82	0	23.530857	25	17.75	30
83	0	23.568379	25	18	30
84	0	23.551996	25	18	30
85	0	23.490499	25	17.75	30
86	0	23.278216	25	17.25	30
87	0	23.110444	25	17	30
88	0	23.121235	25	17	30
89	0	23.134967	24.5	17	30
90	0	23.182885	24.5	17	30
91	0	23.264175	24.5	17.25	30
92	0	23.290073	24.5	17.25	30
93	0	23.562359	25	17.5	30
94	0	23.480807	24.5	17.75	30
95	0	23.242888	24	17	30
96	0	23.082637	23.5	17	30
97	0	22.957297	23.5	16.75	30
98	0	22.86378	23.5	16.666667	30
99	0	22.666175	23	16.5	29.75
100	0	22.584619	23	16.5	29.25
101	0	22.187503	22.5	16	29
102	0	21.784061	21.75	15.5	28
103	0	21.533629	21.25	15.5	27.5
104	0	21.125905	20.75	15.25	26.75
105	0	20.099364	19.5	14.5	25.25
106	0	19.157023	18.75	13.75	24.5
107	0	17.862427	17.5	12.5	22.75
108	0	10.200513	9.5	6	12.5