## htsjdk.samtools.metrics.StringHeader
# CollectQualityYieldMetricsFlow INCLUDE_BQ_HISTOGRAM=true INPUT=/Ddata/Runs/441525/output/441525-20260312_0210/441525-L5411-Z0103-CATATAATCACAGAT/441525-L5411-Z0103-CATATAATCACAGAT_sample.sam.gz OUTPUT=/Ddata/Runs/441525/output/441525-20260312_0210/441525-L5411-Z0103-CATATAATCACAGAT/441525-L5411-Z0103-CATATAATCACAGAT_FlowQ.metric    INCLUDE_SECONDARY_ALIGNMENTS=false INCLUDE_SUPPLEMENTAL_ALIGNMENTS=false IGNORET0TAG=false FILLINGVALUE=0.0 KEEPBOUNDARYFLOWS=false ASSUME_SORTED=true STOP_AFTER=0 VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false USE_JDK_DEFLATER=false USE_JDK_INFLATER=false
## htsjdk.samtools.metrics.StringHeader
# Started on: Fri Mar 13 02:51:51 EDT 2026

## METRICS CLASS	picard.analysis.CollectQualityYieldMetricsFlow$QualityYieldMetricsFlow
TOTAL_READS	PF_READS	MEAN_READ_LENGTH_IN_FLOWS	PF_FLOWS	PF_Q20_FLOWS	PCT_PF_Q20_FLOWS	PF_Q30_FLOWS	PCT_PF_Q30_FLOWS	Q20_EQUIVALENT_YIELD	PF_Q20_EQUIVALENT_YIELD
1001884	1001884	211	211969308	178658354	0.84285	147677693	0.696694	314312140	314312140

## HISTOGRAM	java.lang.Integer
KEY	QUAL_COUNT	MEAN_CYCLE_QUAL	MEDIAN_CYCLE_QUAL	Q25_CYCLE_QUAL	Q75_CYCLE_QUAL
0	2035926	26.239304	26.25	26.25	26.25
1	197135	34.106676	34.25	34.25	35
2	5021	34.690559	35	35	35
3	1246666	34.262897	35	34.25	35
4	8121	32.083	32.5	30	34.25
5	10437	34.693015	35	35	35
6	2866536	33.314321	34.25	32.5	35
7	11566	32.68926	33.75	31	35
8	16641	33.267509	33.75	32.5	35
9	4853515	33.573855	34.25	32.5	35
10	7576	34.324697	35	34.25	35
11	16494	32.637444	33.75	31.75	35
12	5940328	32.857871	35	32.5	35
13	41340	32.735872	35	31.75	35
14	624659	32.825723	35	32.5	35
15	4418242	32.776538	35	32.5	35
16	618625	32.829658	35	32.5	35
17	4993752	32.731958	35	31.75	35
18	123	32.741066	35	32.25	35
19	5398251	32.729258	35	32.25	35
20	302163	32.683187	35	31.75	35
21	340974	32.61159	35	31.75	35
22	3421613	32.464728	35	31.75	35
23	0	32.236253	34.25	31.75	35
24	36183	31.865376	34.25	31.25	35
25	26062011	31.294362	34.25	30.5	35
26	0	30.931717	34.25	30	35
27	33	30.425469	33.75	29.25	35
28	224691	29.900465	33.75	28	35
29	592993	29.375679	33.75	26.75	35
30	5564787	28.902267	33.5	25	35
31	0	28.446492	33	23.5	35
32	9541458	28.003346	32.5	21.75	35
33	0	27.613211	31.75	20.5	35
34	0	27.322931	31.75	20	35
35	132571448	27.029059	31	19.5	35
36	0	26.875885	30.5	19.5	35
37	0	26.584723	30	19	35
38	0	26.396024	29.25	19	35
39	0	26.187503	28.5	18.75	35
40	0	25.940868	27.5	18.5	34.25
41	0	25.793931	27.5	18.5	34.25
42	0	25.621203	27.5	18.25	34.25
43	0	25.512899	27	18	34.25
44	0	25.41493	26.75	18	34.25
45	0	25.356642	26.75	17.75	34.25
46	0	25.298769	26.75	17.75	34.25
47	0	25.321991	26.75	17.75	34.25
48	0	25.339922	26.75	17.75	34.25
49	0	25.309012	26.5	18	34.25
50	0	25.268228	26	18	34.25
51	0	25.169871	25.75	18	33.75
52	0	25.1329	25.25	18	33.75
53	0	24.928165	25	17.75	33.75
54	0	24.741378	25	17.75	33.75
55	0	24.501318	25	17.5	33.75
56	0	24.481841	25	17.5	33.5
57	0	24.365782	25	17.5	33.5
58	0	24.334671	25	17.75	33
59	0	24.17236	25	17.75	32.5
60	0	24.03617	25	17.75	32.5
61	0	23.971742	24.75	17.75	31.75
62	0	23.920161	24.5	18	31.75
63	0	23.88064	24.75	18.25	31
64	0	23.889729	25	18.5	30
65	0	23.935067	25	18.5	30
66	0	23.965427	25	18.75	30
67	0	23.978613	25	18.75	30
68	0	24.021507	25	19	30
69	0	24.1144	25	19	30
70	0	24.148241	25	19.25	30
71	0	24.096507	25	19.5	30
72	0	24.113558	25	19.5	30
73	0	24.034588	25	19.5	30
74	0	24.006531	25	19.5	30
75	0	23.841553	25	19	30
76	0	23.693095	25	18.75	30
77	0	23.53866	25	18	30
78	0	23.299209	25	17.5	30
79	0	23.185072	25	17	30
80	0	23.258707	25	17.25	30
81	0	23.365207	25	17.5	30
82	0	23.510749	25	17.75	30
83	0	23.495856	25	18	30
84	0	23.522335	25	18	30
85	0	23.490391	25	17.75	30
86	0	23.335474	25	17.5	30
87	0	23.141178	25	17	30
88	0	23.069406	24.75	16.75	30
89	0	23.144022	24.75	17	30
90	0	23.245273	24.5	17.25	30
91	0	23.202478	24.5	17.25	30
92	0	23.291664	24.75	17.25	30
93	0	23.550422	24.75	17.75	30
94	0	23.440825	24.5	17.5	30
95	0	23.334567	24.25	17.25	30
96	0	23.335513	24.25	17.25	30
97	0	23.077084	23.75	16.75	30
98	0	22.944986	23.5	16.75	30
99	0	22.877596	23.5	17	29.75
100	0	22.777807	23.5	16.75	29.25
101	0	22.303063	22.5	16.25	29.25
102	0	21.87665	21.75	15.75	28
103	0	21.647057	21.25	16	27.5
104	0	21.036654	20.5	15.25	26.75
105	0	20.202082	19.75	14.75	25.25
106	0	19.13857	18.75	13.75	24.5
107	0	18.068627	17.75	13	23
108	0	10.279813	9.666667	6	12.5