## htsjdk.samtools.metrics.StringHeader
# CollectQualityYieldMetricsFlow INCLUDE_BQ_HISTOGRAM=true INPUT=/Ddata/Runs/441525/output/441525-20260312_0210/441525-L5384-Z0068-CGTCATTGCACAGAT/441525-L5384-Z0068-CGTCATTGCACAGAT_sample.sam.gz OUTPUT=/Ddata/Runs/441525/output/441525-20260312_0210/441525-L5384-Z0068-CGTCATTGCACAGAT/441525-L5384-Z0068-CGTCATTGCACAGAT_FlowQ.metric    INCLUDE_SECONDARY_ALIGNMENTS=false INCLUDE_SUPPLEMENTAL_ALIGNMENTS=false IGNORET0TAG=false FILLINGVALUE=0.0 KEEPBOUNDARYFLOWS=false ASSUME_SORTED=true STOP_AFTER=0 VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false USE_JDK_DEFLATER=false USE_JDK_INFLATER=false
## htsjdk.samtools.metrics.StringHeader
# Started on: Fri Mar 13 02:50:24 EDT 2026

## METRICS CLASS	picard.analysis.CollectQualityYieldMetricsFlow$QualityYieldMetricsFlow
TOTAL_READS	PF_READS	MEAN_READ_LENGTH_IN_FLOWS	PF_FLOWS	PF_Q20_FLOWS	PCT_PF_Q20_FLOWS	PF_Q30_FLOWS	PCT_PF_Q30_FLOWS	Q20_EQUIVALENT_YIELD	PF_Q20_EQUIVALENT_YIELD
999348	999348	210	210090417	176863253	0.841844	145858236	0.694264	311186307	311186307

## HISTOGRAM	java.lang.Integer
KEY	QUAL_COUNT	MEAN_CYCLE_QUAL	MEDIAN_CYCLE_QUAL	Q25_CYCLE_QUAL	Q75_CYCLE_QUAL
0	2031937	26.238744	26.25	26.25	26.25
1	202611	34.420382	35	34.25	35
2	4342	34.574274	35	34.25	35
3	1213386	34.311641	35	34.25	35
4	8219	32.978314	33.5	31.75	34.25
5	10504	34.771529	35	35	35
6	2797380	32.839761	34.25	31.75	35
7	12373	32.522824	33.75	31	35
8	17072	33.214258	33.75	32.5	35
9	4835810	33.38903	34.25	32.5	35
10	7551	34.040339	35	34.25	35
11	16484	32.375026	33.75	31.75	35
12	5910102	32.771163	35	32.5	35
13	40378	32.684084	35	31.75	35
14	622133	32.797425	35	32.5	35
15	4395504	32.726246	35	31.75	35
16	623318	32.834237	35	32.5	35
17	5015499	32.749188	35	31.75	35
18	116	32.73519	35	32	35
19	5462445	32.716665	35	31.75	35
20	301904	32.677909	35	31.75	35
21	313427	32.638487	35	31.75	35
22	3465336	32.470827	35	31.75	35
23	0	32.282548	34.25	31.75	35
24	35659	31.974881	34.25	31.25	35
25	26126996	31.409592	34.25	31	35
26	0	31.162204	34.25	30.25	35
27	17	30.669259	33.75	29.75	35
28	196397	30.132222	33.75	28.5	35
29	565281	29.581977	33.75	27.25	35
30	5442649	29.063485	33.5	25.25	35
31	0	28.566048	33	23.5	35
32	9572285	28.045262	32.5	21.75	35
33	0	27.58629	31.75	20.5	35
34	0	27.253287	31.75	19.75	35
35	130843302	26.92212	31	19.5	35
36	0	26.786632	30	19.5	35
37	0	26.502904	29.25	19	35
38	0	26.272437	28.5	19	35
39	0	26.049252	27.5	18.75	34.25
40	0	25.768279	27.25	18.5	34.25
41	0	25.584399	26.75	18.25	34.25
42	0	25.369473	26	18	34.25
43	0	25.211791	25.5	17.75	34.25
44	0	25.073894	25	17.75	34.25
45	0	24.975478	25	17.5	34.25
46	0	24.884361	25	17.5	33.75
47	0	24.91072	25	17.5	33.75
48	0	24.939052	25	17.5	33.75
49	0	24.914202	25	17.75	33.75
50	0	24.879848	25	17.75	33.75
51	0	24.794279	25	17.75	33.75
52	0	24.75729	25	17.75	33.75
53	0	24.561479	25	17.5	33.75
54	0	24.388111	25	17.5	33.5
55	0	24.185334	25	17.25	33
56	0	24.211372	25	17.5	33
57	0	24.108741	25	17.5	32.5
58	0	24.087394	25	17.5	32.5
59	0	23.929662	24.5	17.5	32.5
60	0	23.814163	24.25	17.5	31.75
61	0	23.763638	24	17.75	31.75
62	0	23.689325	24	17.75	31
63	0	23.652523	24	18	30
64	0	23.660203	24.5	18.5	30
65	0	23.688798	25	18.5	30
66	0	23.727049	25	18.5	30
67	0	23.722934	25	18.5	30
68	0	23.764507	25	18.75	30
69	0	23.838509	25	19	30
70	0	23.842961	25	19	30
71	0	23.856992	25	19	30
72	0	23.82548	25	19.25	30
73	0	23.791176	25	19.25	30
74	0	23.751632	25	19.25	30
75	0	23.617517	25	18.75	30
76	0	23.409389	25	18.5	29.25
77	0	23.147046	25	17.5	30
78	0	22.910866	25	17	30
79	0	22.752863	24.75	16.5	30
80	0	22.815257	25	16.666667	30
81	0	22.907535	25	16.75	30
82	0	22.974997	25	17	30
83	0	23.022564	25	17.25	30
84	0	23.026488	25	17.25	30
85	0	23.00985	24.75	17.25	30
86	0	22.783292	24	16.75	29.25
87	0	22.603414	23.75	16.25	29.25
88	0	22.486995	23.5	16.25	29.25
89	0	22.572382	23.5	16.25	29.5
90	0	22.554317	23.5	16.5	29.25
91	0	22.599859	23.5	16.5	29.25
92	0	22.613103	23.5	16.666667	29.25
93	0	22.992713	24	16.75	30
94	0	22.900119	23.5	16.75	30
95	0	22.769691	23.5	16.5	30
96	0	22.429991	23	16.25	29.25
97	0	22.362778	22.75	16	29.25
98	0	22.253651	22.75	16	29.25
99	0	22.287912	22.75	16.25	29.25
100	0	22.092761	22.5	16	29.25
101	0	21.719993	22	15.5	28
102	0	21.164126	21	15.25	27.5
103	0	20.956597	20.5	15.25	26.75
104	0	20.431264	20	14.75	25.75
105	0	19.57844	19	14	25
106	0	18.539955	18	13.25	23.5
107	0	17.558483	17	12.5	22.25
108	0	9.802987	9.333333	6	12.5