## htsjdk.samtools.metrics.StringHeader
# CollectQualityYieldMetricsFlow INCLUDE_BQ_HISTOGRAM=true INPUT=/Ddata/Runs/441525/output/441525-20260312_0210/441525-L5288-Z0033-CATCATCGATTCGAT/441525-L5288-Z0033-CATCATCGATTCGAT_sample.sam.gz OUTPUT=/Ddata/Runs/441525/output/441525-20260312_0210/441525-L5288-Z0033-CATCATCGATTCGAT/441525-L5288-Z0033-CATCATCGATTCGAT_FlowQ.metric    INCLUDE_SECONDARY_ALIGNMENTS=false INCLUDE_SUPPLEMENTAL_ALIGNMENTS=false IGNORET0TAG=false FILLINGVALUE=0.0 KEEPBOUNDARYFLOWS=false ASSUME_SORTED=true STOP_AFTER=0 VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false USE_JDK_DEFLATER=false USE_JDK_INFLATER=false
## htsjdk.samtools.metrics.StringHeader
# Started on: Fri Mar 13 02:50:23 EDT 2026

## METRICS CLASS	picard.analysis.CollectQualityYieldMetricsFlow$QualityYieldMetricsFlow
TOTAL_READS	PF_READS	MEAN_READ_LENGTH_IN_FLOWS	PF_FLOWS	PF_Q20_FLOWS	PCT_PF_Q20_FLOWS	PF_Q30_FLOWS	PCT_PF_Q30_FLOWS	Q20_EQUIVALENT_YIELD	PF_Q20_EQUIVALENT_YIELD
1000428	1000428	261	261533063	228449514	0.873501	191951407	0.733947	397694105	397694105

## HISTOGRAM	java.lang.Integer
KEY	QUAL_COUNT	MEAN_CYCLE_QUAL	MEDIAN_CYCLE_QUAL	Q25_CYCLE_QUAL	Q75_CYCLE_QUAL
0	2041094	26.24197	26.25	26.25	26.25
1	180288	34.691991	35	35	35
2	9699	34.801027	35	35	35
3	1345136	34.36356	35	34.25	35
4	12059	33.018374	33.5	31.75	35
5	15654	34.764482	35	35	35
6	2725684	33.372325	35	32.5	35
7	14690	33.239481	35	31.75	35
8	23459	33.505999	33.75	32.5	35
9	4668356	33.786246	34.25	33.5	35
10	10182	34.335759	35	34.25	35
11	22305	32.880401	33.75	32.5	35
12	5731968	33.142796	35	32.5	35
13	58621	33.053924	35	32.5	35
14	670778	33.122672	35	32.5	35
15	4312553	33.070041	35	32.5	35
16	687784	33.144585	35	32.5	35
17	4929462	33.041261	35	32.5	35
18	128	33.055502	35	32.5	35
19	5623649	33.0611	35	32.5	35
20	366375	33.038207	35	32.5	35
21	505779	33.014787	35	32.5	35
22	4387493	32.944214	35	32.5	35
23	0	32.849712	35	32.5	35
24	48432	32.702298	35	32.5	35
25	30086994	32.471313	35	31.75	35
26	0	32.331233	35	31.75	35
27	37	32.125862	34.25	31.75	35
28	297254	31.877737	34.25	31.75	35
29	805743	31.627801	34.25	31.5	35
30	7971906	31.389078	34.25	31.25	35
31	0	31.137953	34.25	31	35
32	10903229	30.876348	34.25	30	35
33	0	30.637217	33.75	29.75	35
34	0	30.471479	33.75	29.25	35
35	173076272	30.297214	33.75	28.5	35
36	0	30.21311	33.75	27.75	35
37	0	30.018371	33.75	27.25	35
38	0	29.850154	33.75	26.5	35
39	0	29.681674	33.75	25.5	35
40	0	29.470637	33.75	25	35
41	0	29.340305	33.75	25	35
42	0	29.162124	33.5	25	35
43	0	29.060954	33.5	25	35
44	0	28.94721	33	25	35
45	0	28.901017	33	25	35
46	0	28.8246	33	24.5	35
47	0	28.790864	32.75	24.25	35
48	0	28.749327	32.5	24.25	35
49	0	28.67474	32.5	23.75	35
50	0	28.579535	32.5	23.5	35
51	0	28.426683	32.5	23.5	35
52	0	28.36056	32.5	23.25	35
53	0	28.120818	31.75	22.75	35
54	0	27.911676	31.75	22.25	35
55	0	27.626512	31.5	21.75	35
56	0	27.576809	31.25	21.75	35
57	0	27.400004	31	21.5	35
58	0	27.252597	30.25	21.25	35
59	0	26.996148	30	21	35
60	0	26.755713	29.25	20.5	34.25
61	0	26.577555	28.5	20.5	34.25
62	0	26.412821	27.75	20.5	33.75
63	0	26.25456	27.5	20.5	33.75
64	0	26.129808	27	21	33.75
65	0	26.047864	26.75	21	33
66	0	25.961838	26.75	21	32.5
67	0	25.868272	26.5	21	32.5
68	0	25.764638	26.5	21	32.5
69	0	25.744562	26.5	21	32.5
70	0	25.687391	26.25	21	31.75
71	0	25.61978	26.25	21.5	31.75
72	0	25.513397	26	21.25	31.75
73	0	25.438358	26	21.25	31.75
74	0	25.361111	26	21	31.25
75	0	25.162988	26	21	31
76	0	24.999772	25.75	20.5	31
77	0	24.78279	25.75	20	31
78	0	24.575366	25.5	19.5	31
79	0	24.405721	25.5	19	31
80	0	24.410388	25.5	19.25	31
81	0	24.431097	25.5	19.25	31
82	0	24.400667	25.5	19.25	30.75
83	0	24.357085	25.5	19.25	30.25
84	0	24.333089	25.25	19.25	30.25
85	0	24.23732	25	19	30
86	0	24.053132	25	18.75	30
87	0	23.863128	25	18.25	30
88	0	23.833949	25	18	30
89	0	23.81861	25	18	30
90	0	23.705926	25	18	30
91	0	23.734767	25	18	30
92	0	23.70573	25	18	30
93	0	23.868011	25	18.25	30
94	0	23.725778	24.75	18	30
95	0	23.545706	24.5	17.75	30
96	0	23.357527	24.25	17.25	30
97	0	23.167851	23.75	17.25	30
98	0	23.06225	23.5	17	30
99	0	22.89906	23.5	17	29.25
100	0	22.631841	23	16.75	29.25
101	0	22.287677	22.5	16.25	28.75
102	0	21.883193	22	16	28
103	0	21.63118	21.5	15.75	27.5
104	0	21.157777	21	15.5	26.75
105	0	20.31402	20	14.75	25.5
106	0	19.435883	19	14	25
107	0	18.19989	18	13	23
108	0	10.651918	10.25	6	13.333333