## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1676-Tetrahymena_pyrrhiformis_standing.2x36mers.unique.bam] OUTPUT=L1676-Tetrahymena_pyrrhiformis_standing.2x36mers.unique.dedup.bam METRICS_FILE=L1676-Tetrahymena_pyrrhiformis_standing.2x36mers.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Aug 17 19:06:44 PDT 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	1306566	1796304	0	445060	45912	0.340633	1543627

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.023203
2.0	1.462101
3.0	1.650364
4.0	1.731119
5.0	1.765758
6.0	1.780617
7.0	1.78699
8.0	1.789724
9.0	1.790897
10.0	1.7914
11.0	1.791615
12.0	1.791708
13.0	1.791748
14.0	1.791765
15.0	1.791772
16.0	1.791775
17.0	1.791776
18.0	1.791777
19.0	1.791777
20.0	1.791777
21.0	1.791777
22.0	1.791777
23.0	1.791777
24.0	1.791777
25.0	1.791777
26.0	1.791777
27.0	1.791777
28.0	1.791777
29.0	1.791777
30.0	1.791777
31.0	1.791777
32.0	1.791777
33.0	1.791777
34.0	1.791777
35.0	1.791777
36.0	1.791777
37.0	1.791777
38.0	1.791777
39.0	1.791777
40.0	1.791777
41.0	1.791777
42.0	1.791777
43.0	1.791777
44.0	1.791777
45.0	1.791777
46.0	1.791777
47.0	1.791777
48.0	1.791777
49.0	1.791777
50.0	1.791777
51.0	1.791777
52.0	1.791777
53.0	1.791777
54.0	1.791777
55.0	1.791777
56.0	1.791777
57.0	1.791777
58.0	1.791777
59.0	1.791777
60.0	1.791777
61.0	1.791777
62.0	1.791777
63.0	1.791777
64.0	1.791777
65.0	1.791777
66.0	1.791777
67.0	1.791777
68.0	1.791777
69.0	1.791777
70.0	1.791777
71.0	1.791777
72.0	1.791777
73.0	1.791777
74.0	1.791777
75.0	1.791777
76.0	1.791777
77.0	1.791777
78.0	1.791777
79.0	1.791777
80.0	1.791777
81.0	1.791777
82.0	1.791777
83.0	1.791777
84.0	1.791777
85.0	1.791777
86.0	1.791777
87.0	1.791777
88.0	1.791777
89.0	1.791777
90.0	1.791777
91.0	1.791777
92.0	1.791777
93.0	1.791777
94.0	1.791777
95.0	1.791777
96.0	1.791777
97.0	1.791777
98.0	1.791777
99.0	1.791777
100.0	1.791777