## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1673-Tetrahymena_thermophila_standing.2x36mers.unique.bam] OUTPUT=L1673-Tetrahymena_thermophila_standing.2x36mers.unique.dedup.bam METRICS_FILE=L1673-Tetrahymena_thermophila_standing.2x36mers.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Aug 17 19:07:21 PDT 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	37427291	29601756	0	5876497	922397	0.157011	122029945

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.021595
2.0	1.773353
3.0	2.326547
4.0	2.733624
5.0	3.033179
6.0	3.253611
7.0	3.41582
8.0	3.535184
9.0	3.62302
10.0	3.687656
11.0	3.73522
12.0	3.77022
13.0	3.795975
14.0	3.814928
15.0	3.828875
16.0	3.839138
17.0	3.84669
18.0	3.852247
19.0	3.856337
20.0	3.859346
21.0	3.86156
22.0	3.86319
23.0	3.864389
24.0	3.865271
25.0	3.865921
26.0	3.866399
27.0	3.86675
28.0	3.867009
29.0	3.867199
30.0	3.867339
31.0	3.867443
32.0	3.867518
33.0	3.867574
34.0	3.867615
35.0	3.867646
36.0	3.867668
37.0	3.867684
38.0	3.867696
39.0	3.867705
40.0	3.867712
41.0	3.867716
42.0	3.86772
43.0	3.867723
44.0	3.867724
45.0	3.867726
46.0	3.867727
47.0	3.867728
48.0	3.867728
49.0	3.867729
50.0	3.867729
51.0	3.867729
52.0	3.867729
53.0	3.867729
54.0	3.86773
55.0	3.86773
56.0	3.86773
57.0	3.86773
58.0	3.86773
59.0	3.86773
60.0	3.86773
61.0	3.86773
62.0	3.86773
63.0	3.86773
64.0	3.86773
65.0	3.86773
66.0	3.86773
67.0	3.86773
68.0	3.86773
69.0	3.86773
70.0	3.86773
71.0	3.86773
72.0	3.86773
73.0	3.86773
74.0	3.86773
75.0	3.86773
76.0	3.86773
77.0	3.86773
78.0	3.86773
79.0	3.86773
80.0	3.86773
81.0	3.86773
82.0	3.86773
83.0	3.86773
84.0	3.86773
85.0	3.86773
86.0	3.86773
87.0	3.86773
88.0	3.86773
89.0	3.86773
90.0	3.86773
91.0	3.86773
92.0	3.86773
93.0	3.86773
94.0	3.86773
95.0	3.86773
96.0	3.86773
97.0	3.86773
98.0	3.86773
99.0	3.86773
100.0	3.86773