## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1617-Cas9_sg38219_clicked_sheared.2x36mers.hg38-female.unique.bam] OUTPUT=L1617-Cas9_sg38219_clicked_sheared.2x36mers.hg38-female.unique.dedup.bam METRICS_FILE=L1617-Cas9_sg38219_clicked_sheared.2x36mers.hg38-female.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Thu Jul 16 00:20:16 PDT 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	19707668	0	0	719022	202932	0.036484	362043352

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.010124
2.0	1.966731
3.0	2.872659
4.0	3.73059
5.0	4.543069
6.0	5.312503
7.0	6.041173
8.0	6.731238
9.0	7.384744
10.0	8.003628
11.0	8.589723
12.0	9.144767
13.0	9.670406
14.0	10.168196
15.0	10.639614
16.0	11.086056
17.0	11.508845
18.0	11.909236
19.0	12.288414
20.0	12.647504
21.0	12.987569
22.0	13.309617
23.0	13.614604
24.0	13.903433
25.0	14.176959
26.0	14.435994
27.0	14.681306
28.0	14.913621
29.0	15.133629
30.0	15.34198
31.0	15.539293
32.0	15.726152
33.0	15.903112
34.0	16.070697
35.0	16.229403
36.0	16.3797
37.0	16.522036
38.0	16.65683
39.0	16.784483
40.0	16.905373
41.0	17.019858
42.0	17.128278
43.0	17.230954
44.0	17.32819
45.0	17.420274
46.0	17.50748
47.0	17.590066
48.0	17.668277
49.0	17.742344
50.0	17.812487
51.0	17.878913
52.0	17.941821
53.0	18.001396
54.0	18.057814
55.0	18.111244
56.0	18.161842
57.0	18.20976
58.0	18.25514
59.0	18.298115
60.0	18.338814
61.0	18.377356
62.0	18.413856
63.0	18.448423
64.0	18.481158
65.0	18.512159
66.0	18.541517
67.0	18.56932
68.0	18.59565
69.0	18.620586
70.0	18.6442
71.0	18.666563
72.0	18.687741
73.0	18.707797
74.0	18.726791
75.0	18.744778
76.0	18.761813
77.0	18.777945
78.0	18.793222
79.0	18.80769
80.0	18.821391
81.0	18.834367
82.0	18.846655
83.0	18.858292
84.0	18.869312
85.0	18.879749
86.0	18.889633
87.0	18.898993
88.0	18.907857
89.0	18.916252
90.0	18.924202
91.0	18.93173
92.0	18.93886
93.0	18.945612
94.0	18.952006
95.0	18.958062
96.0	18.963797
97.0	18.969228
98.0	18.974371
99.0	18.979242
100.0	18.983854