## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1616-Cas9_sg38202_clicked_sheared.2x36mers.hg38-female.unique.bam] OUTPUT=L1616-Cas9_sg38202_clicked_sheared.2x36mers.hg38-female.unique.dedup.bam METRICS_FILE=L1616-Cas9_sg38202_clicked_sheared.2x36mers.hg38-female.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Thu Jul 16 00:20:16 PDT 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	12162655	0	0	392012	120194	0.032231	262731531

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.009752
2.0	1.973824
3.0	2.894284
4.0	3.773104
5.0	4.612169
6.0	5.413275
7.0	6.178142
8.0	6.908407
9.0	7.605637
10.0	8.271325
11.0	8.906899
12.0	9.513722
13.0	10.093092
14.0	10.646254
15.0	11.174391
16.0	11.678636
17.0	12.160071
18.0	12.619726
19.0	13.058588
20.0	13.477596
21.0	13.87765
22.0	14.259605
23.0	14.624282
24.0	14.972462
25.0	15.30489
26.0	15.622281
27.0	15.925313
28.0	16.214637
29.0	16.490872
30.0	16.754611
31.0	17.006419
32.0	17.246836
33.0	17.476377
34.0	17.695533
35.0	17.904776
36.0	18.104553
37.0	18.295292
38.0	18.477403
39.0	18.651276
40.0	18.817283
41.0	18.97578
42.0	19.127107
43.0	19.271588
44.0	19.409533
45.0	19.541238
46.0	19.666985
47.0	19.787043
48.0	19.90167
49.0	20.011112
50.0	20.115603
51.0	20.215366
52.0	20.310617
53.0	20.401559
54.0	20.488386
55.0	20.571286
56.0	20.650436
57.0	20.726005
58.0	20.798155
59.0	20.867042
60.0	20.932812
61.0	20.995607
62.0	21.055561
63.0	21.112803
64.0	21.167456
65.0	21.219636
66.0	21.269455
67.0	21.317021
68.0	21.362435
69.0	21.405795
70.0	21.447193
71.0	21.486719
72.0	21.524456
73.0	21.560486
74.0	21.594886
75.0	21.62773
76.0	21.659089
77.0	21.689028
78.0	21.717614
79.0	21.744906
80.0	21.770963
81.0	21.795842
82.0	21.819595
83.0	21.842274
84.0	21.863927
85.0	21.8846
86.0	21.904338
87.0	21.923183
88.0	21.941176
89.0	21.958354
90.0	21.974756
91.0	21.990415
92.0	22.005366
93.0	22.019641
94.0	22.03327
95.0	22.046283
96.0	22.058707
97.0	22.070568
98.0	22.081894
99.0	22.092706
100.0	22.10303