## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1614-dCas9_sg38290_clicked_sheared.2x36mers.hg38-female.unique.bam] OUTPUT=L1614-dCas9_sg38290_clicked_sheared.2x36mers.hg38-female.unique.dedup.bam METRICS_FILE=L1614-dCas9_sg38290_clicked_sheared.2x36mers.hg38-female.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Thu Jul 16 00:20:16 PDT 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	3677762	0	0	170577	40161	0.046381	49510591

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.010636
2.0	1.948919
3.0	2.820031
4.0	3.628779
5.0	4.379629
6.0	5.076725
7.0	5.723915
8.0	6.324773
9.0	6.882615
10.0	7.400521
11.0	7.88135
12.0	8.327756
13.0	8.742204
14.0	9.126981
15.0	9.484212
16.0	9.815868
17.0	10.123782
18.0	10.409651
19.0	10.675055
20.0	10.921458
21.0	11.150222
22.0	11.362608
23.0	11.559789
24.0	11.742854
25.0	11.912813
26.0	12.070605
27.0	12.217101
28.0	12.353108
29.0	12.479379
30.0	12.59661
31.0	12.705449
32.0	12.806495
33.0	12.900308
34.0	12.987405
35.0	13.068266
36.0	13.143338
37.0	13.213036
38.0	13.277745
39.0	13.33782
40.0	13.393595
41.0	13.445377
42.0	13.493452
43.0	13.538085
44.0	13.579523
45.0	13.617994
46.0	13.653711
47.0	13.686872
48.0	13.717658
49.0	13.74624
50.0	13.772776
51.0	13.797412
52.0	13.820285
53.0	13.84152
54.0	13.861234
55.0	13.879538
56.0	13.896531
57.0	13.912308
58.0	13.926955
59.0	13.940553
60.0	13.953178
61.0	13.964899
62.0	13.975781
63.0	13.985884
64.0	13.995264
65.0	14.003972
66.0	14.012057
67.0	14.019563
68.0	14.026532
69.0	14.033001
70.0	14.039008
71.0	14.044584
72.0	14.049762
73.0	14.054568
74.0	14.059031
75.0	14.063174
76.0	14.067021
77.0	14.070592
78.0	14.073907
79.0	14.076985
80.0	14.079843
81.0	14.082496
82.0	14.084959
83.0	14.087246
84.0	14.089369
85.0	14.091341
86.0	14.093171
87.0	14.09487
88.0	14.096447
89.0	14.097911
90.0	14.099271
91.0	14.100533
92.0	14.101705
93.0	14.102793
94.0	14.103803
95.0	14.104741
96.0	14.105612
97.0	14.10642
98.0	14.107171
99.0	14.107868
100.0	14.108514