## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1430-38902_eGATA1-dCas9-CasKAS.2x36mers.hg38-female.unique.bam] OUTPUT=L1430-38902_eGATA1-dCas9-CasKAS.2x36mers.hg38-female.unique.dedup.bam METRICS_FILE=L1430-38902_eGATA1-dCas9-CasKAS.2x36mers.hg38-female.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Feb 14 00:59:34 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	3093250	0	0	72414	27551	0.02341	103722376

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.008854
2.0	1.988065
3.0	2.938505
4.0	3.861019
5.0	4.756428
6.0	5.625527
7.0	6.469091
8.0	7.287869
9.0	8.08259
10.0	8.85396
11.0	9.602665
12.0	10.329372
13.0	11.034727
14.0	11.719357
15.0	12.383872
16.0	13.028861
17.0	13.654899
18.0	14.262543
19.0	14.852333
20.0	15.424794
21.0	15.980435
22.0	16.51975
23.0	17.043218
24.0	17.551306
25.0	18.044466
26.0	18.523135
27.0	18.98774
28.0	19.438694
29.0	19.876398
30.0	20.301241
31.0	20.713601
32.0	21.113846
33.0	21.50233
34.0	21.8794
35.0	22.245391
36.0	22.600628
37.0	22.945428
38.0	23.280097
39.0	23.604932
40.0	23.920223
41.0	24.22625
42.0	24.523286
43.0	24.811594
44.0	25.091431
45.0	25.363045
46.0	25.626679
47.0	25.882567
48.0	26.130937
49.0	26.372008
50.0	26.605997
51.0	26.83311
52.0	27.053551
53.0	27.267514
54.0	27.475191
55.0	27.676766
56.0	27.872418
57.0	28.062321
58.0	28.246645
59.0	28.425553
60.0	28.599204
61.0	28.767753
62.0	28.931349
63.0	29.090139
64.0	29.244263
65.0	29.393859
66.0	29.539059
67.0	29.679993
68.0	29.816786
69.0	29.94956
70.0	30.078433
71.0	30.203519
72.0	30.32493
73.0	30.442773
74.0	30.557154
75.0	30.668174
76.0	30.775932
77.0	30.880524
78.0	30.982043
79.0	31.080579
80.0	31.17622
81.0	31.269051
82.0	31.359154
83.0	31.44661
84.0	31.531496
85.0	31.613888
86.0	31.693859
87.0	31.771481
88.0	31.846822
89.0	31.919949
90.0	31.990927
91.0	32.05982
92.0	32.126689
93.0	32.191593
94.0	32.25459
95.0	32.315736
96.0	32.375085
97.0	32.432691
98.0	32.488604
99.0	32.542874
100.0	32.59555