## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1429-38290_eHDAC6-dCas9-CasKAS.2x36mers.hg38-female.unique.bam] OUTPUT=L1429-38290_eHDAC6-dCas9-CasKAS.2x36mers.hg38-female.unique.dedup.bam METRICS_FILE=L1429-38290_eHDAC6-dCas9-CasKAS.2x36mers.hg38-female.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Feb 14 00:59:34 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	9740976	0	0	350064	91538	0.035937	176850746

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.009228
2.0	1.96437
3.0	2.868325
4.0	3.723837
5.0	4.533501
6.0	5.299775
7.0	6.024983
8.0	6.711328
9.0	7.36089
10.0	7.975642
11.0	8.557448
12.0	9.108076
13.0	9.629195
14.0	10.122386
15.0	10.589147
16.0	11.030894
17.0	11.448968
18.0	11.844636
19.0	12.219101
20.0	12.573497
21.0	12.908901
22.0	13.226331
23.0	13.526749
24.0	13.811068
25.0	14.08015
26.0	14.334811
27.0	14.575825
28.0	14.803923
29.0	15.019797
30.0	15.224102
31.0	15.417459
32.0	15.600453
33.0	15.77364
34.0	15.937546
35.0	16.092668
36.0	16.239477
37.0	16.378419
38.0	16.509914
39.0	16.634363
40.0	16.752142
41.0	16.86361
42.0	16.969103
43.0	17.068944
44.0	17.163433
45.0	17.252859
46.0	17.337493
47.0	17.417591
48.0	17.493397
49.0	17.56514
50.0	17.633038
51.0	17.697297
52.0	17.758113
53.0	17.81567
54.0	17.870142
55.0	17.921695
56.0	17.970485
57.0	18.01666
58.0	18.060361
59.0	18.10172
60.0	18.140863
61.0	18.177908
62.0	18.212967
63.0	18.246148
64.0	18.27755
65.0	18.30727
66.0	18.335397
67.0	18.362016
68.0	18.387209
69.0	18.411052
70.0	18.433617
71.0	18.454973
72.0	18.475185
73.0	18.494313
74.0	18.512416
75.0	18.529549
76.0	18.545764
77.0	18.56111
78.0	18.575633
79.0	18.589378
80.0	18.602387
81.0	18.614698
82.0	18.62635
83.0	18.637377
84.0	18.647813
85.0	18.65769
86.0	18.667038
87.0	18.675884
88.0	18.684257
89.0	18.692181
90.0	18.69968
91.0	18.706777
92.0	18.713494
93.0	18.719851
94.0	18.725868
95.0	18.731562
96.0	18.736951
97.0	18.742051
98.0	18.746877
99.0	18.751445
100.0	18.755768

