## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1428-Hox_inv_9-1uL_sgRNA-Cas9-CasKAS.2x36mers.mm10.unique.bam] OUTPUT=L1428-Hox_inv_9-1uL_sgRNA-Cas9-CasKAS.2x36mers.mm10.unique.dedup.bam METRICS_FILE=L1428-Hox_inv_9-1uL_sgRNA-Cas9-CasKAS.2x36mers.mm10.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Feb 14 05:40:09 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	6559577	0	0	409978	73582	0.062501	60346469

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.010739
2.0	1.917373
3.0	2.730625
4.0	3.460112
5.0	4.114462
6.0	4.701415
7.0	5.227912
8.0	5.700181
9.0	6.123806
10.0	6.503798
11.0	6.844651
12.0	7.150396
13.0	7.42465
14.0	7.670656
15.0	7.891323
16.0	8.089262
17.0	8.266814
18.0	8.426077
19.0	8.568937
20.0	8.697082
21.0	8.812028
22.0	8.915135
23.0	9.007622
24.0	9.090583
25.0	9.164999
26.0	9.23175
27.0	9.291626
28.0	9.345335
29.0	9.393512
30.0	9.436726
31.0	9.47549
32.0	9.510261
33.0	9.54145
34.0	9.569427
35.0	9.594523
36.0	9.617033
37.0	9.637225
38.0	9.655338
39.0	9.671584
40.0	9.686158
41.0	9.69923
42.0	9.710956
43.0	9.721474
44.0	9.730909
45.0	9.739372
46.0	9.746963
47.0	9.753772
48.0	9.75988
49.0	9.765359
50.0	9.770274
51.0	9.774682
52.0	9.778636
53.0	9.782183
54.0	9.785365
55.0	9.788219
56.0	9.790779
57.0	9.793075
58.0	9.795135
59.0	9.796983
60.0	9.79864
61.0	9.800127
62.0	9.80146
63.0	9.802657
64.0	9.80373
65.0	9.804692
66.0	9.805555
67.0	9.80633
68.0	9.807024
69.0	9.807647
70.0	9.808206
71.0	9.808708
72.0	9.809157
73.0	9.809561
74.0	9.809923
75.0	9.810247
76.0	9.810538
77.0	9.8108
78.0	9.811034
79.0	9.811244
80.0	9.811432
81.0	9.811601
82.0	9.811753
83.0	9.811889
84.0	9.812011
85.0	9.812121
86.0	9.812219
87.0	9.812307
88.0	9.812386
89.0	9.812457
90.0	9.81252
91.0	9.812577
92.0	9.812628
93.0	9.812674
94.0	9.812715
95.0	9.812752
96.0	9.812785
97.0	9.812815
98.0	9.812842
99.0	9.812866
100.0	9.812887