## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1426-Symbiodinium_minutum_SSBO1-0h-KAS.2x36mers.symbB.v1.0.genome.unique.bam] OUTPUT=L1426-Symbiodinium_minutum_SSBO1-0h-KAS.2x36mers.symbB.v1.0.genome.unique.dedup.bam METRICS_FILE=L1426-Symbiodinium_minutum_SSBO1-0h-KAS.2x36mers.symbB.v1.0.genome.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Feb 14 12:13:10 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	1819450	0	0	1441929	285936	0.792508	384660

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.009917
2.0	1.018831
3.0	1.01891
4.0	1.01891
5.0	1.01891
6.0	1.01891
7.0	1.01891
8.0	1.01891
9.0	1.01891
10.0	1.01891
11.0	1.01891
12.0	1.01891
13.0	1.01891
14.0	1.01891
15.0	1.01891
16.0	1.01891
17.0	1.01891
18.0	1.01891
19.0	1.01891
20.0	1.01891
21.0	1.01891
22.0	1.01891
23.0	1.01891
24.0	1.01891
25.0	1.01891
26.0	1.01891
27.0	1.01891
28.0	1.01891
29.0	1.01891
30.0	1.01891
31.0	1.01891
32.0	1.01891
33.0	1.01891
34.0	1.01891
35.0	1.01891
36.0	1.01891
37.0	1.01891
38.0	1.01891
39.0	1.01891
40.0	1.01891
41.0	1.01891
42.0	1.01891
43.0	1.01891
44.0	1.01891
45.0	1.01891
46.0	1.01891
47.0	1.01891
48.0	1.01891
49.0	1.01891
50.0	1.01891
51.0	1.01891
52.0	1.01891
53.0	1.01891
54.0	1.01891
55.0	1.01891
56.0	1.01891
57.0	1.01891
58.0	1.01891
59.0	1.01891
60.0	1.01891
61.0	1.01891
62.0	1.01891
63.0	1.01891
64.0	1.01891
65.0	1.01891
66.0	1.01891
67.0	1.01891
68.0	1.01891
69.0	1.01891
70.0	1.01891
71.0	1.01891
72.0	1.01891
73.0	1.01891
74.0	1.01891
75.0	1.01891
76.0	1.01891
77.0	1.01891
78.0	1.01891
79.0	1.01891
80.0	1.01891
81.0	1.01891
82.0	1.01891
83.0	1.01891
84.0	1.01891
85.0	1.01891
86.0	1.01891
87.0	1.01891
88.0	1.01891
89.0	1.01891
90.0	1.01891
91.0	1.01891
92.0	1.01891
93.0	1.01891
94.0	1.01891
95.0	1.01891
96.0	1.01891
97.0	1.01891
98.0	1.01891
99.0	1.01891
100.0	1.01891