## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1312-Eyal_B1_KAS_post-click.2x36mers.hg38-female.unique.bam] OUTPUT=L1312-Eyal_B1_KAS_post-click.2x36mers.hg38-female.unique.dedup.bam METRICS_FILE=L1312-Eyal_B1_KAS_post-click.2x36mers.hg38-female.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jan 11 22:55:13 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	17814408	0	0	4853397	669499	0.272442	29144795

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.028356
2.0	1.586423
3.0	1.889274
4.0	2.053625
5.0	2.142815
6.0	2.191216
7.0	2.217483
8.0	2.231737
9.0	2.239472
10.0	2.24367
11.0	2.245948
12.0	2.247184
13.0	2.247855
14.0	2.248219
15.0	2.248417
16.0	2.248524
17.0	2.248582
18.0	2.248614
19.0	2.248631
20.0	2.24864
21.0	2.248645
22.0	2.248648
23.0	2.24865
24.0	2.24865
25.0	2.248651
26.0	2.248651
27.0	2.248651
28.0	2.248651
29.0	2.248651
30.0	2.248651
31.0	2.248651
32.0	2.248651
33.0	2.248651
34.0	2.248651
35.0	2.248651
36.0	2.248651
37.0	2.248651
38.0	2.248651
39.0	2.248651
40.0	2.248651
41.0	2.248651
42.0	2.248651
43.0	2.248651
44.0	2.248651
45.0	2.248651
46.0	2.248651
47.0	2.248651
48.0	2.248651
49.0	2.248651
50.0	2.248651
51.0	2.248651
52.0	2.248651
53.0	2.248651
54.0	2.248651
55.0	2.248651
56.0	2.248651
57.0	2.248651
58.0	2.248651
59.0	2.248651
60.0	2.248651
61.0	2.248651
62.0	2.248651
63.0	2.248651
64.0	2.248651
65.0	2.248651
66.0	2.248651
67.0	2.248651
68.0	2.248651
69.0	2.248651
70.0	2.248651
71.0	2.248651
72.0	2.248651
73.0	2.248651
74.0	2.248651
75.0	2.248651
76.0	2.248651
77.0	2.248651
78.0	2.248651
79.0	2.248651
80.0	2.248651
81.0	2.248651
82.0	2.248651
83.0	2.248651
84.0	2.248651
85.0	2.248651
86.0	2.248651
87.0	2.248651
88.0	2.248651
89.0	2.248651
90.0	2.248651
91.0	2.248651
92.0	2.248651
93.0	2.248651
94.0	2.248651
95.0	2.248651
96.0	2.248651
97.0	2.248651
98.0	2.248651
99.0	2.248651
100.0	2.248651