Index of /kundaje/marinovg/oak/ENCODE4/datasets-Hi-C/L1624-Tetrahymena_thermophila-MboI_MseI_Hi-C/juicer-L1624-Tetrahymena_thermophila-MboI_MseI_Hi-C-3D_DNA

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]LICENSE2020-07-16 19:59 1.0K 
[TXT]README.md2020-07-16 19:59 8.7K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.0.asm2020-07-16 20:15 5.0K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.0.assembly2020-07-16 20:15 27K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.0.cprops2020-07-16 20:00 21K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.0.hic2020-07-16 20:17 24M 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.0_asm.scaffold_track.txt2020-07-16 20:15 132K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.0_asm.superscaf_track.txt2020-07-16 20:15 32K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.1.asm2020-07-16 20:35 9.4K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.1.assembly2020-07-16 20:36 72K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.1.cprops2020-07-16 20:18 60K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.1.hic2020-07-16 20:38 25M 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.1_asm.scaffold_track.txt2020-07-16 20:36 252K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.1_asm.superscaf_track.txt2020-07-16 20:36 111K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.2.asm2020-07-16 20:52 10K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.2.assembly2020-07-16 20:53 79K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.2.cprops2020-07-16 20:39 67K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.2.hic2020-07-16 20:55 25M 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.2_asm.scaffold_track.txt2020-07-16 20:53 275K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.2_asm.superscaf_track.txt2020-07-16 20:53 128K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.FINAL.assembly2020-07-16 21:10 75K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.FINAL.fasta2020-07-16 21:10 100M 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.FINAL.hic2020-07-16 21:14 26M 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.FINAL_asm.scaffold_track.txt2020-07-16 21:12 252K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.FINAL_asm.superscaf_track.txt2020-07-16 21:12 118K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.cprops2020-07-16 20:00 21K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.edits.txt2020-07-16 20:39 66K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.final.asm2020-07-16 21:06 9.3K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.final.assembly2020-07-16 21:07 71K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.final.cprops2020-07-16 21:06 60K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.final.fasta2020-07-16 21:10 100M 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.final.hic2020-07-16 21:10 26M 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.asm2020-07-16 20:58 10K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.cprops2020-07-16 20:56 68K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.depletion_score_narrow.wig2020-07-16 20:56 1.2M 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.depletion_score_wide.wig2020-07-16 20:56 16K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.edits_2D.txt2020-07-16 20:56 1.5K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.hic2020-07-16 21:01 25M 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.mismatch_narrow.bed2020-07-16 20:56 4.1K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.mismatch_wide.bed2020-07-16 20:56 27  
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.mismatches_2D.txt2020-07-16 20:56 1.9K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.assembly2020-07-16 21:03 80K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.depletion_score_narrow.wig2020-07-16 21:02 1.2M 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.depletion_score_wide.wig2020-07-16 21:01 16K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.edits_2D.txt2020-07-16 21:02 146  
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.mismatch_narrow.bed2020-07-16 21:02 4.1K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.mismatch_wide.bed2020-07-16 21:01 27  
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.mismatches_2D.txt2020-07-16 21:02 1.8K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.suspicious_2D.txt2020-07-16 21:02 1.9K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.suspect_2D.txt2020-07-16 20:56 3.4K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished_asm.scaffold_track.txt2020-07-16 20:59 276K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished_asm.superscaf_track.txt2020-07-16 20:59 130K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom.asm2020-07-16 21:06 9.3K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom.assembly2020-07-16 21:07 71K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom.cprops2020-07-16 21:06 60K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom.fasta2020-07-16 21:10 100M 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom.hic2020-07-16 21:10 26M 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom_asm.scaffold_track.txt2020-07-16 21:07 252K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom_asm.superscaf_track.txt2020-07-16 21:07 118K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.resolved.asm2020-07-16 20:52 10K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.resolved.cprops2020-07-16 20:39 67K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.resolved.hic2020-07-16 20:55 25M 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.resolved.polish.assembly2020-07-16 20:59 80K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.resolved_asm.scaffold_track.txt2020-07-16 20:53 275K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.resolved_asm.superscaf_track.txt2020-07-16 20:53 128K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.split.asm2020-07-16 21:03 10K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.split.assembly2020-07-16 21:06 80K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.split.cprops2020-07-16 21:02 68K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.split.hic2020-07-16 21:06 25M 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.split_asm.scaffold_track.txt2020-07-16 21:03 276K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.split_asm.superscaf_track.txt2020-07-16 21:03 131K 
[TXT]archive.Tetrahymena_thermophila.JCVI-TTA1-2.2.20.edits.at.step.1.txt2020-07-16 20:39 58K 
[ ]coverage_wide.at.step.0.wig2020-07-16 20:18 75K 
[ ]coverage_wide.at.step.1.wig2020-07-16 20:39 75K 
[ ]depletion_score_narrow.at.step.0.wig2020-07-16 20:18 1.2M 
[ ]depletion_score_narrow.at.step.1.wig2020-07-16 20:39 1.2M 
[ ]depletion_score_wide.at.step.0.wig2020-07-16 20:17 67K 
[ ]depletion_score_wide.at.step.1.wig2020-07-16 20:38 67K 
[TXT]edits.for.step.1.txt2020-07-16 20:18 78K 
[TXT]edits.for.step.2.txt2020-07-16 20:39 14K 
[TXT]h.edits.txt2020-07-16 21:02 110  
[ ]mismatch_narrow.at.step.0.bed2020-07-16 20:18 4.2K 
[ ]mismatch_narrow.at.step.1.bed2020-07-16 20:39 11K 
[ ]mismatch_wide.at.step.0.bed2020-07-16 20:17 3.2K 
[ ]mismatch_wide.at.step.1.bed2020-07-16 20:38 5.6K 
[TXT]mismatches.at.step.0.txt2020-07-16 20:18 5.4K 
[TXT]mismatches.at.step.1.txt2020-07-16 20:39 7.6K 
[ ]repeats_wide.at.step.0.bed2020-07-16 20:18 11K 
[ ]repeats_wide.at.step.1.bed2020-07-16 20:39 17K 
[TXT]run-asm-pipeline-post-review.sh2020-07-16 19:59 11K 
[TXT]run-asm-pipeline.sh2020-07-16 19:59 44K 
[ ]suspect.at.step.0.bed2020-07-16 20:18 13K 
[ ]suspect.at.step.1.bed2020-07-16 20:39 27K 
[TXT]suspect_2D.at.step.0.txt2020-07-16 20:18 83K 
[TXT]suspect_2D.at.step.1.txt2020-07-16 20:39 22K 
[ ]z2020-07-16 19:59 356  
[ ]zL1624-3D.1.err2020-07-16 21:11 1.9K 
[ ]zL1624-3D.1.out2020-07-16 21:14 27K 
[ ]zL1624-3D.1.sbatch2020-07-16 19:59 560  
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