Index of /kundaje/marinovg/oak/ENCODE4/datasets-Hi-C/L1519-Giardia_lamblia-Hi-C-MboI_MseI/juicer-L1519-Giardia_lamblia-Hi-C-MboI_MseI-3D_DNA
Name
Last modified
Size
Description
Parent Directory
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Giardia_lamblia.GCA_000002435.1.20.0.asm
2020-07-02 21:59
1.2K
Giardia_lamblia.GCA_000002435.1.20.0.assembly
2020-07-02 22:00
7.0K
Giardia_lamblia.GCA_000002435.1.20.0.cprops
2020-07-02 21:47
5.5K
Giardia_lamblia.GCA_000002435.1.20.0.hic
2020-07-02 22:08
24M
Giardia_lamblia.GCA_000002435.1.20.0_asm.scaffold_track.txt
2020-07-02 22:00
32K
Giardia_lamblia.GCA_000002435.1.20.0_asm.superscaf_track.txt
2020-07-02 22:00
12K
Giardia_lamblia.GCA_000002435.1.20.1.asm
2020-07-02 22:32
1.2K
Giardia_lamblia.GCA_000002435.1.20.1.assembly
2020-07-02 22:34
7.3K
Giardia_lamblia.GCA_000002435.1.20.1.cprops
2020-07-02 22:09
5.8K
Giardia_lamblia.GCA_000002435.1.20.1.hic
2020-07-02 22:42
24M
Giardia_lamblia.GCA_000002435.1.20.1_asm.scaffold_track.txt
2020-07-02 22:34
33K
Giardia_lamblia.GCA_000002435.1.20.1_asm.superscaf_track.txt
2020-07-02 22:34
14K
Giardia_lamblia.GCA_000002435.1.20.2.asm
2020-07-02 23:07
1.2K
Giardia_lamblia.GCA_000002435.1.20.2.assembly
2020-07-02 23:09
7.3K
Giardia_lamblia.GCA_000002435.1.20.2.cprops
2020-07-02 22:43
5.8K
Giardia_lamblia.GCA_000002435.1.20.2.hic
2020-07-02 23:17
24M
Giardia_lamblia.GCA_000002435.1.20.2_asm.scaffold_track.txt
2020-07-02 23:09
33K
Giardia_lamblia.GCA_000002435.1.20.2_asm.superscaf_track.txt
2020-07-02 23:09
14K
Giardia_lamblia.GCA_000002435.1.20.FINAL.assembly
2020-07-02 23:41
8.0K
Giardia_lamblia.GCA_000002435.1.20.FINAL.fasta
2020-07-02 23:41
11M
Giardia_lamblia.GCA_000002435.1.20.FINAL.hic
2020-07-02 23:52
24M
Giardia_lamblia.GCA_000002435.1.20.FINAL_asm.scaffold_track.txt
2020-07-02 23:44
33K
Giardia_lamblia.GCA_000002435.1.20.FINAL_asm.superscaf_track.txt
2020-07-02 23:44
14K
Giardia_lamblia.GCA_000002435.1.20.cprops
2020-07-02 21:47
5.5K
Giardia_lamblia.GCA_000002435.1.20.edits.txt
2020-07-02 22:43
1.7K
Giardia_lamblia.GCA_000002435.1.20.final.asm
2020-07-02 23:30
1.2K
Giardia_lamblia.GCA_000002435.1.20.final.assembly
2020-07-02 23:33
7.4K
Giardia_lamblia.GCA_000002435.1.20.final.cprops
2020-07-02 23:30
5.9K
Giardia_lamblia.GCA_000002435.1.20.final.fasta
2020-07-02 23:41
11M
Giardia_lamblia.GCA_000002435.1.20.final.hic
2020-07-02 23:41
24M
Giardia_lamblia.GCA_000002435.1.20.polished.asm
2020-07-02 23:19
1.2K
Giardia_lamblia.GCA_000002435.1.20.polished.cprops
2020-07-02 23:19
5.9K
Giardia_lamblia.GCA_000002435.1.20.polished.depletion_score_narrow.wig
2020-07-02 23:19
139K
Giardia_lamblia.GCA_000002435.1.20.polished.depletion_score_wide.wig
2020-07-02 23:18
901
Giardia_lamblia.GCA_000002435.1.20.polished.edits_2D.txt
2020-07-02 23:19
98
Giardia_lamblia.GCA_000002435.1.20.polished.hic
2020-07-02 23:29
24M
Giardia_lamblia.GCA_000002435.1.20.polished.mismatch_narrow.bed
2020-07-02 23:19
11
Giardia_lamblia.GCA_000002435.1.20.polished.mismatch_wide.bed
2020-07-02 23:18
0
Giardia_lamblia.GCA_000002435.1.20.polished.mismatches_2D.txt
2020-07-02 23:19
47
Giardia_lamblia.GCA_000002435.1.20.polished.split.assembly
2020-07-02 23:30
7.4K
Giardia_lamblia.GCA_000002435.1.20.polished.split.depletion_score_narrow.wig
2020-07-02 23:30
139K
Giardia_lamblia.GCA_000002435.1.20.polished.split.depletion_score_wide.wig
2020-07-02 23:29
901
Giardia_lamblia.GCA_000002435.1.20.polished.split.edits_2D.txt
2020-07-02 23:30
98
Giardia_lamblia.GCA_000002435.1.20.polished.split.mismatch_narrow.bed
2020-07-02 23:30
11
Giardia_lamblia.GCA_000002435.1.20.polished.split.mismatch_wide.bed
2020-07-02 23:29
0
Giardia_lamblia.GCA_000002435.1.20.polished.split.mismatches_2D.txt
2020-07-02 23:30
47
Giardia_lamblia.GCA_000002435.1.20.polished.split.suspicious_2D.txt
2020-07-02 23:30
98
Giardia_lamblia.GCA_000002435.1.20.polished.suspect_2D.txt
2020-07-02 23:19
98
Giardia_lamblia.GCA_000002435.1.20.polished_asm.scaffold_track.txt
2020-07-02 23:21
33K
Giardia_lamblia.GCA_000002435.1.20.polished_asm.superscaf_track.txt
2020-07-02 23:21
15K
Giardia_lamblia.GCA_000002435.1.20.rawchrom.asm
2020-07-02 23:30
1.2K
Giardia_lamblia.GCA_000002435.1.20.rawchrom.assembly
2020-07-02 23:33
7.4K
Giardia_lamblia.GCA_000002435.1.20.rawchrom.cprops
2020-07-02 23:30
5.9K
Giardia_lamblia.GCA_000002435.1.20.rawchrom.fasta
2020-07-02 23:41
11M
Giardia_lamblia.GCA_000002435.1.20.rawchrom.hic
2020-07-02 23:41
24M
Giardia_lamblia.GCA_000002435.1.20.rawchrom_asm.scaffold_track.txt
2020-07-02 23:33
33K
Giardia_lamblia.GCA_000002435.1.20.rawchrom_asm.superscaf_track.txt
2020-07-02 23:33
15K
Giardia_lamblia.GCA_000002435.1.20.resolved.asm
2020-07-02 23:07
1.2K
Giardia_lamblia.GCA_000002435.1.20.resolved.cprops
2020-07-02 22:43
5.8K
Giardia_lamblia.GCA_000002435.1.20.resolved.hic
2020-07-02 23:17
24M
Giardia_lamblia.GCA_000002435.1.20.resolved.polish.assembly
2020-07-02 23:21
7.4K
Giardia_lamblia.GCA_000002435.1.20.resolved_asm.scaffold_track.txt
2020-07-02 23:09
33K
Giardia_lamblia.GCA_000002435.1.20.resolved_asm.superscaf_track.txt
2020-07-02 23:09
14K
Giardia_lamblia.GCA_000002435.1.20.split.asm
2020-07-02 23:30
1.2K
Giardia_lamblia.GCA_000002435.1.20.split.assembly
2020-07-02 23:30
7.4K
Giardia_lamblia.GCA_000002435.1.20.split.cprops
2020-07-02 23:30
5.9K
Giardia_lamblia.GCA_000002435.1.20.split_asm.scaffold_track.txt
2020-07-02 23:30
0
Giardia_lamblia.GCA_000002435.1.20.split_asm.superscaf_track.txt
2020-07-02 23:30
15K
LICENSE
2020-07-02 21:47
1.0K
README.md
2020-07-02 21:47
8.7K
archive.Giardia_lamblia.GCA_000002435.1.20.edits.at.step.1.txt
2020-07-02 22:43
1.6K
coverage_wide.at.step.0.wig
2020-07-02 22:09
8.3K
coverage_wide.at.step.1.wig
2020-07-02 22:43
8.3K
depletion_score_narrow.at.step.0.wig
2020-07-02 22:09
130K
depletion_score_narrow.at.step.1.wig
2020-07-02 22:43
130K
depletion_score_wide.at.step.0.wig
2020-07-02 22:08
6.7K
depletion_score_wide.at.step.1.wig
2020-07-02 22:42
6.9K
edits.for.step.1.txt
2020-07-02 22:09
2.5K
edits.for.step.2.txt
2020-07-02 22:43
368
h.edits.txt
2020-07-02 23:30
100
mismatch_narrow.at.step.0.bed
2020-07-02 22:09
27
mismatch_narrow.at.step.1.bed
2020-07-02 22:43
27
mismatch_wide.at.step.0.bed
2020-07-02 22:08
27
mismatch_wide.at.step.1.bed
2020-07-02 22:42
27
mismatches.at.step.0.txt
2020-07-02 22:09
154
mismatches.at.step.1.txt
2020-07-02 22:43
154
repeats_wide.at.step.0.bed
2020-07-02 22:09
25
repeats_wide.at.step.1.bed
2020-07-02 22:43
27
run-asm-pipeline-post-review.sh
2020-07-02 21:47
11K
run-asm-pipeline.sh
2020-07-02 21:47
44K
suspect.at.step.0.bed
2020-07-02 22:09
52
suspect.at.step.1.bed
2020-07-02 22:43
27
suspect_2D.at.step.0.txt
2020-07-02 22:09
2.6K
suspect_2D.at.step.1.txt
2020-07-02 22:43
475
Apache/2.4.66 (Ubuntu) Server at mitra.stanford.edu Port 443