Index of /kundaje/marinovg/oak/ENCODE4/datasets-Hi-C/L1518-Naegleria_gruberi-Hi-C-MboI_MseI/juicer-L1518-Naegleria_gruberi-Hi-C-MboI_MseI-3D_DNA-rounds20

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]GCA_000004985.1_V1.0_genomic.0.asm2020-06-19 09:20 3.3K 
[ ]GCA_000004985.1_V1.0_genomic.0.assembly2020-06-19 09:21 20K 
[ ]GCA_000004985.1_V1.0_genomic.0.cprops2020-06-19 09:00 15K 
[ ]GCA_000004985.1_V1.0_genomic.0.hic2020-06-19 09:24 9.9M 
[TXT]GCA_000004985.1_V1.0_genomic.0_asm.scaffold_track.txt2020-06-19 09:21 88K 
[TXT]GCA_000004985.1_V1.0_genomic.0_asm.superscaf_track.txt2020-06-19 09:21 3.2K 
[ ]GCA_000004985.1_V1.0_genomic.1.asm2020-06-19 09:34 5.9K 
[ ]GCA_000004985.1_V1.0_genomic.1.assembly2020-06-19 09:35 49K 
[ ]GCA_000004985.1_V1.0_genomic.1.cprops2020-06-19 09:25 41K 
[ ]GCA_000004985.1_V1.0_genomic.1.hic2020-06-19 09:38 10M 
[TXT]GCA_000004985.1_V1.0_genomic.1_asm.scaffold_track.txt2020-06-19 09:35 164K 
[TXT]GCA_000004985.1_V1.0_genomic.1_asm.superscaf_track.txt2020-06-19 09:35 57K 
[ ]GCA_000004985.1_V1.0_genomic.2.asm2020-06-19 09:47 6.7K 
[ ]GCA_000004985.1_V1.0_genomic.2.assembly2020-06-19 09:48 63K 
[ ]GCA_000004985.1_V1.0_genomic.2.cprops2020-06-19 09:39 54K 
[ ]GCA_000004985.1_V1.0_genomic.2.hic2020-06-19 09:51 10M 
[TXT]GCA_000004985.1_V1.0_genomic.2_asm.scaffold_track.txt2020-06-19 09:48 198K 
[TXT]GCA_000004985.1_V1.0_genomic.2_asm.superscaf_track.txt2020-06-19 09:48 124K 
[ ]GCA_000004985.1_V1.0_genomic.3.asm2020-06-19 09:58 7.0K 
[ ]GCA_000004985.1_V1.0_genomic.3.assembly2020-06-19 09:59 66K 
[ ]GCA_000004985.1_V1.0_genomic.3.cprops2020-06-19 09:51 57K 
[ ]GCA_000004985.1_V1.0_genomic.3.hic2020-06-19 10:02 10M 
[TXT]GCA_000004985.1_V1.0_genomic.3_asm.scaffold_track.txt2020-06-19 09:59 206K 
[TXT]GCA_000004985.1_V1.0_genomic.3_asm.superscaf_track.txt2020-06-19 09:59 133K 
[ ]GCA_000004985.1_V1.0_genomic.4.asm2020-06-19 10:09 7.2K 
[ ]GCA_000004985.1_V1.0_genomic.4.assembly2020-06-19 10:10 68K 
[ ]GCA_000004985.1_V1.0_genomic.4.cprops2020-06-19 10:02 59K 
[ ]GCA_000004985.1_V1.0_genomic.4.hic2020-06-19 10:13 10M 
[TXT]GCA_000004985.1_V1.0_genomic.4_asm.scaffold_track.txt2020-06-19 10:10 212K 
[TXT]GCA_000004985.1_V1.0_genomic.4_asm.superscaf_track.txt2020-06-19 10:10 139K 
[ ]GCA_000004985.1_V1.0_genomic.5.asm2020-06-19 10:20 7.3K 
[ ]GCA_000004985.1_V1.0_genomic.5.assembly2020-06-19 10:21 69K 
[ ]GCA_000004985.1_V1.0_genomic.5.cprops2020-06-19 10:13 60K 
[ ]GCA_000004985.1_V1.0_genomic.5.hic2020-06-19 10:24 10M 
[TXT]GCA_000004985.1_V1.0_genomic.5_asm.scaffold_track.txt2020-06-19 10:21 216K 
[TXT]GCA_000004985.1_V1.0_genomic.5_asm.superscaf_track.txt2020-06-19 10:21 143K 
[ ]GCA_000004985.1_V1.0_genomic.6.asm2020-06-19 10:30 7.4K 
[ ]GCA_000004985.1_V1.0_genomic.6.assembly2020-06-19 10:31 70K 
[ ]GCA_000004985.1_V1.0_genomic.6.cprops2020-06-19 10:24 61K 
[ ]GCA_000004985.1_V1.0_genomic.6.hic2020-06-19 10:34 10M 
[TXT]GCA_000004985.1_V1.0_genomic.6_asm.scaffold_track.txt2020-06-19 10:31 219K 
[TXT]GCA_000004985.1_V1.0_genomic.6_asm.superscaf_track.txt2020-06-19 10:31 146K 
[ ]GCA_000004985.1_V1.0_genomic.7.asm2020-06-19 10:40 7.5K 
[ ]GCA_000004985.1_V1.0_genomic.7.assembly2020-06-19 10:40 71K 
[ ]GCA_000004985.1_V1.0_genomic.7.cprops2020-06-19 10:34 62K 
[ ]GCA_000004985.1_V1.0_genomic.7.hic2020-06-19 10:44 10M 
[TXT]GCA_000004985.1_V1.0_genomic.7_asm.scaffold_track.txt2020-06-19 10:40 221K 
[TXT]GCA_000004985.1_V1.0_genomic.7_asm.superscaf_track.txt2020-06-19 10:40 148K 
[ ]GCA_000004985.1_V1.0_genomic.8.asm2020-06-19 10:50 7.6K 
[ ]GCA_000004985.1_V1.0_genomic.8.assembly2020-06-19 10:51 71K 
[ ]GCA_000004985.1_V1.0_genomic.8.cprops2020-06-19 10:44 62K 
[ ]GCA_000004985.1_V1.0_genomic.8.hic2020-06-19 10:54 10M 
[TXT]GCA_000004985.1_V1.0_genomic.8_asm.scaffold_track.txt2020-06-19 10:51 222K 
[TXT]GCA_000004985.1_V1.0_genomic.8_asm.superscaf_track.txt2020-06-19 10:51 150K 
[ ]GCA_000004985.1_V1.0_genomic.9.asm2020-06-19 11:00 7.6K 
[ ]GCA_000004985.1_V1.0_genomic.9.assembly2020-06-19 11:01 72K 
[ ]GCA_000004985.1_V1.0_genomic.9.cprops2020-06-19 10:54 63K 
[ ]GCA_000004985.1_V1.0_genomic.9.hic2020-06-19 11:04 10M 
[TXT]GCA_000004985.1_V1.0_genomic.9_asm.scaffold_track.txt2020-06-19 11:01 224K 
[TXT]GCA_000004985.1_V1.0_genomic.9_asm.superscaf_track.txt2020-06-19 11:01 151K 
[ ]GCA_000004985.1_V1.0_genomic.10.asm2020-06-19 11:11 7.7K 
[ ]GCA_000004985.1_V1.0_genomic.10.assembly2020-06-19 11:11 73K 
[ ]GCA_000004985.1_V1.0_genomic.10.cprops2020-06-19 11:04 63K 
[ ]GCA_000004985.1_V1.0_genomic.10.hic2020-06-19 11:14 10M 
[TXT]GCA_000004985.1_V1.0_genomic.10_asm.scaffold_track.txt2020-06-19 11:11 226K 
[TXT]GCA_000004985.1_V1.0_genomic.10_asm.superscaf_track.txt2020-06-19 11:11 153K 
[ ]GCA_000004985.1_V1.0_genomic.11.asm2020-06-19 11:21 7.7K 
[ ]GCA_000004985.1_V1.0_genomic.11.assembly2020-06-19 11:22 73K 
[ ]GCA_000004985.1_V1.0_genomic.11.cprops2020-06-19 11:15 64K 
[ ]GCA_000004985.1_V1.0_genomic.11.hic2020-06-19 11:25 10M 
[TXT]GCA_000004985.1_V1.0_genomic.11_asm.scaffold_track.txt2020-06-19 11:22 227K 
[TXT]GCA_000004985.1_V1.0_genomic.11_asm.superscaf_track.txt2020-06-19 11:22 154K 
[ ]GCA_000004985.1_V1.0_genomic.12.asm2020-06-19 11:32 7.8K 
[ ]GCA_000004985.1_V1.0_genomic.12.assembly2020-06-19 11:32 74K 
[ ]GCA_000004985.1_V1.0_genomic.12.cprops2020-06-19 11:25 64K 
[ ]GCA_000004985.1_V1.0_genomic.12.hic2020-06-19 11:35 10M 
[TXT]GCA_000004985.1_V1.0_genomic.12_asm.scaffold_track.txt2020-06-19 11:32 228K 
[TXT]GCA_000004985.1_V1.0_genomic.12_asm.superscaf_track.txt2020-06-19 11:32 155K 
[ ]GCA_000004985.1_V1.0_genomic.13.asm2020-06-19 11:42 7.8K 
[ ]GCA_000004985.1_V1.0_genomic.13.assembly2020-06-19 11:43 74K 
[ ]GCA_000004985.1_V1.0_genomic.13.cprops2020-06-19 11:36 65K 
[ ]GCA_000004985.1_V1.0_genomic.13.hic2020-06-19 11:46 10M 
[TXT]GCA_000004985.1_V1.0_genomic.13_asm.scaffold_track.txt2020-06-19 11:43 230K 
[TXT]GCA_000004985.1_V1.0_genomic.13_asm.superscaf_track.txt2020-06-19 11:43 157K 
[ ]GCA_000004985.1_V1.0_genomic.14.asm2020-06-19 11:52 7.9K 
[ ]GCA_000004985.1_V1.0_genomic.14.assembly2020-06-19 11:53 75K 
[ ]GCA_000004985.1_V1.0_genomic.14.cprops2020-06-19 11:46 65K 
[ ]GCA_000004985.1_V1.0_genomic.14.hic2020-06-19 11:56 10M 
[TXT]GCA_000004985.1_V1.0_genomic.14_asm.scaffold_track.txt2020-06-19 11:53 232K 
[TXT]GCA_000004985.1_V1.0_genomic.14_asm.superscaf_track.txt2020-06-19 11:53 158K 
[ ]GCA_000004985.1_V1.0_genomic.15.asm2020-06-19 12:02 7.9K 
[ ]GCA_000004985.1_V1.0_genomic.15.assembly2020-06-19 12:03 75K 
[ ]GCA_000004985.1_V1.0_genomic.15.cprops2020-06-19 11:56 65K 
[ ]GCA_000004985.1_V1.0_genomic.15.hic2020-06-19 12:06 10M 
[TXT]GCA_000004985.1_V1.0_genomic.15_asm.scaffold_track.txt2020-06-19 12:03 233K 
[TXT]GCA_000004985.1_V1.0_genomic.15_asm.superscaf_track.txt2020-06-19 12:03 160K 
[ ]GCA_000004985.1_V1.0_genomic.16.asm2020-06-19 12:13 8.0K 
[ ]GCA_000004985.1_V1.0_genomic.16.assembly2020-06-19 12:14 76K 
[ ]GCA_000004985.1_V1.0_genomic.16.cprops2020-06-19 12:06 66K 
[ ]GCA_000004985.1_V1.0_genomic.16.hic2020-06-19 12:17 10M 
[TXT]GCA_000004985.1_V1.0_genomic.16_asm.scaffold_track.txt2020-06-19 12:14 234K 
[TXT]GCA_000004985.1_V1.0_genomic.16_asm.superscaf_track.txt2020-06-19 12:14 160K 
[ ]GCA_000004985.1_V1.0_genomic.17.asm2020-06-19 12:24 8.0K 
[ ]GCA_000004985.1_V1.0_genomic.17.assembly2020-06-19 12:24 76K 
[ ]GCA_000004985.1_V1.0_genomic.17.cprops2020-06-19 12:17 66K 
[ ]GCA_000004985.1_V1.0_genomic.17.hic2020-06-19 12:27 10M 
[TXT]GCA_000004985.1_V1.0_genomic.17_asm.scaffold_track.txt2020-06-19 12:24 235K 
[TXT]GCA_000004985.1_V1.0_genomic.17_asm.superscaf_track.txt2020-06-19 12:24 162K 
[ ]GCA_000004985.1_V1.0_genomic.18.asm2020-06-19 12:34 8.0K 
[ ]GCA_000004985.1_V1.0_genomic.18.assembly2020-06-19 12:34 76K 
[ ]GCA_000004985.1_V1.0_genomic.18.cprops2020-06-19 12:28 66K 
[ ]GCA_000004985.1_V1.0_genomic.18.hic2020-06-19 12:37 10M 
[TXT]GCA_000004985.1_V1.0_genomic.18_asm.scaffold_track.txt2020-06-19 12:34 236K 
[TXT]GCA_000004985.1_V1.0_genomic.18_asm.superscaf_track.txt2020-06-19 12:34 163K 
[ ]GCA_000004985.1_V1.0_genomic.19.asm2020-06-19 12:43 8.1K 
[ ]GCA_000004985.1_V1.0_genomic.19.assembly2020-06-19 12:44 77K 
[ ]GCA_000004985.1_V1.0_genomic.19.cprops2020-06-19 12:38 67K 
[ ]GCA_000004985.1_V1.0_genomic.19.hic2020-06-19 12:47 10M 
[TXT]GCA_000004985.1_V1.0_genomic.19_asm.scaffold_track.txt2020-06-19 12:44 237K 
[TXT]GCA_000004985.1_V1.0_genomic.19_asm.superscaf_track.txt2020-06-19 12:44 163K 
[ ]GCA_000004985.1_V1.0_genomic.20.asm2020-06-19 12:54 8.1K 
[ ]GCA_000004985.1_V1.0_genomic.20.assembly2020-06-19 12:54 77K 
[ ]GCA_000004985.1_V1.0_genomic.20.cprops2020-06-19 12:47 67K 
[ ]GCA_000004985.1_V1.0_genomic.20.hic2020-06-19 12:57 10M 
[TXT]GCA_000004985.1_V1.0_genomic.20_asm.scaffold_track.txt2020-06-19 12:54 238K 
[TXT]GCA_000004985.1_V1.0_genomic.20_asm.superscaf_track.txt2020-06-19 12:54 164K 
[ ]GCA_000004985.1_V1.0_genomic.FINAL.assembly2020-06-19 13:28 53K 
[ ]GCA_000004985.1_V1.0_genomic.FINAL.fasta2020-06-19 13:28 43M 
[ ]GCA_000004985.1_V1.0_genomic.FINAL.hic2020-06-19 13:34 10M 
[TXT]GCA_000004985.1_V1.0_genomic.FINAL_asm.scaffold_track.txt2020-06-19 13:31 144K 
[TXT]GCA_000004985.1_V1.0_genomic.FINAL_asm.superscaf_track.txt2020-06-19 13:31 158K 
[ ]GCA_000004985.1_V1.0_genomic.cprops2020-06-19 09:00 15K 
[TXT]GCA_000004985.1_V1.0_genomic.edits.txt2020-06-19 12:47 101K 
[ ]GCA_000004985.1_V1.0_genomic.final.asm2020-06-19 13:23 7.9K 
[ ]GCA_000004985.1_V1.0_genomic.final.assembly2020-06-19 13:25 45K 
[ ]GCA_000004985.1_V1.0_genomic.final.cprops2020-06-19 13:23 36K 
[ ]GCA_000004985.1_V1.0_genomic.final.fasta2020-06-19 13:28 40M 
[ ]GCA_000004985.1_V1.0_genomic.final.hic2020-06-19 13:28 10M 
[ ]GCA_000004985.1_V1.0_genomic.polished.asm2020-06-19 13:13 17K 
[ ]GCA_000004985.1_V1.0_genomic.polished.cprops2020-06-19 12:58 67K 
[ ]GCA_000004985.1_V1.0_genomic.polished.depletion_score_narrow.wig2020-06-19 12:58 492K 
[ ]GCA_000004985.1_V1.0_genomic.polished.depletion_score_wide.wig2020-06-19 12:57 5.8K 
[TXT]GCA_000004985.1_V1.0_genomic.polished.edits_2D.txt2020-06-19 12:58 47  
[ ]GCA_000004985.1_V1.0_genomic.polished.hic2020-06-19 13:17 13M 
[ ]GCA_000004985.1_V1.0_genomic.polished.mismatch_narrow.bed2020-06-19 12:58 746  
[ ]GCA_000004985.1_V1.0_genomic.polished.mismatch_wide.bed2020-06-19 12:57 26  
[TXT]GCA_000004985.1_V1.0_genomic.polished.mismatches_2D.txt2020-06-19 12:58 47  
[ ]GCA_000004985.1_V1.0_genomic.polished.split.assembly2020-06-19 13:20 86K 
[ ]GCA_000004985.1_V1.0_genomic.polished.split.depletion_score_narrow.wig2020-06-19 13:17 502K 
[ ]GCA_000004985.1_V1.0_genomic.polished.split.depletion_score_wide.wig2020-06-19 13:17 5.9K 
[TXT]GCA_000004985.1_V1.0_genomic.polished.split.edits_2D.txt2020-06-19 13:17 47  
[ ]GCA_000004985.1_V1.0_genomic.polished.split.mismatch_narrow.bed2020-06-19 13:17 756  
[ ]GCA_000004985.1_V1.0_genomic.polished.split.mismatch_wide.bed2020-06-19 13:17 27  
[TXT]GCA_000004985.1_V1.0_genomic.polished.split.mismatches_2D.txt2020-06-19 13:17 47  
[TXT]GCA_000004985.1_V1.0_genomic.polished.split.suspicious_2D.txt2020-06-19 13:17 47  
[TXT]GCA_000004985.1_V1.0_genomic.polished.suspect_2D.txt2020-06-19 12:58 47  
[TXT]GCA_000004985.1_V1.0_genomic.polished_asm.scaffold_track.txt2020-06-19 13:14 243K 
[TXT]GCA_000004985.1_V1.0_genomic.polished_asm.superscaf_track.txt2020-06-19 13:14 174K 
[ ]GCA_000004985.1_V1.0_genomic.rawchrom.asm2020-06-19 13:23 7.9K 
[ ]GCA_000004985.1_V1.0_genomic.rawchrom.assembly2020-06-19 13:25 45K 
[ ]GCA_000004985.1_V1.0_genomic.rawchrom.cprops2020-06-19 13:23 36K 
[ ]GCA_000004985.1_V1.0_genomic.rawchrom.fasta2020-06-19 13:28 40M 
[ ]GCA_000004985.1_V1.0_genomic.rawchrom.hic2020-06-19 13:28 10M 
[TXT]GCA_000004985.1_V1.0_genomic.rawchrom_asm.scaffold_track.txt2020-06-19 13:25 143K 
[TXT]GCA_000004985.1_V1.0_genomic.rawchrom_asm.superscaf_track.txt2020-06-19 13:25 159K 
[ ]GCA_000004985.1_V1.0_genomic.resolved.asm2020-06-19 12:54 8.1K 
[ ]GCA_000004985.1_V1.0_genomic.resolved.cprops2020-06-19 12:47 67K 
[ ]GCA_000004985.1_V1.0_genomic.resolved.hic2020-06-19 12:57 10M 
[ ]GCA_000004985.1_V1.0_genomic.resolved.polish.assembly2020-06-19 13:14 86K 
[TXT]GCA_000004985.1_V1.0_genomic.resolved_asm.scaffold_track.txt2020-06-19 12:54 238K 
[TXT]GCA_000004985.1_V1.0_genomic.resolved_asm.superscaf_track.txt2020-06-19 12:54 164K 
[ ]GCA_000004985.1_V1.0_genomic.split.asm2020-06-19 13:19 17K 
[ ]GCA_000004985.1_V1.0_genomic.split.assembly2020-06-19 13:23 86K 
[ ]GCA_000004985.1_V1.0_genomic.split.cprops2020-06-19 13:17 67K 
[ ]GCA_000004985.1_V1.0_genomic.split.hic2020-06-19 13:23 13M 
[TXT]GCA_000004985.1_V1.0_genomic.split_asm.scaffold_track.txt2020-06-19 13:20 243K 
[TXT]GCA_000004985.1_V1.0_genomic.split_asm.superscaf_track.txt2020-06-19 13:20 340K 
[ ]LICENSE2020-06-19 08:54 1.0K 
[TXT]README.md2020-06-19 08:54 8.7K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.1.txt2020-06-19 09:39 39K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.2.txt2020-06-19 09:51 83K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.3.txt2020-06-19 10:02 85K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.4.txt2020-06-19 10:13 88K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.5.txt2020-06-19 10:24 90K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.6.txt2020-06-19 10:34 92K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.7.txt2020-06-19 10:44 92K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.8.txt2020-06-19 10:54 93K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.9.txt2020-06-19 11:04 94K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.10.txt2020-06-19 11:15 95K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.11.txt2020-06-19 11:25 95K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.12.txt2020-06-19 11:36 96K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.13.txt2020-06-19 11:46 97K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.14.txt2020-06-19 11:56 98K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.15.txt2020-06-19 12:06 98K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.16.txt2020-06-19 12:17 99K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.17.txt2020-06-19 12:28 100K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.18.txt2020-06-19 12:38 100K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.19.txt2020-06-19 12:47 100K 
[ ]coverage_wide.at.step.0.wig2020-06-19 09:25 29K 
[ ]coverage_wide.at.step.1.wig2020-06-19 09:39 28K 
[ ]coverage_wide.at.step.2.wig2020-06-19 09:51 29K 
[ ]coverage_wide.at.step.3.wig2020-06-19 10:02 29K 
[ ]coverage_wide.at.step.4.wig2020-06-19 10:13 29K 
[ ]coverage_wide.at.step.5.wig2020-06-19 10:24 29K 
[ ]coverage_wide.at.step.6.wig2020-06-19 10:34 29K 
[ ]coverage_wide.at.step.7.wig2020-06-19 10:44 29K 
[ ]coverage_wide.at.step.8.wig2020-06-19 10:54 29K 
[ ]coverage_wide.at.step.9.wig2020-06-19 11:04 29K 
[ ]coverage_wide.at.step.10.wig2020-06-19 11:15 29K 
[ ]coverage_wide.at.step.11.wig2020-06-19 11:25 29K 
[ ]coverage_wide.at.step.12.wig2020-06-19 11:36 29K 
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