Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 60 threads; java version "1.8.0_131"; scripts/juicer.sh -t 60 -D /oak/stanford/groups/akundaje/marinovg/ENCODE4/ATAC/2021-05-15-NextSeq-run/juicer-L1355-Phaeodactylum_tricoturnum-HiC-MboI_MluCI-all_reads -d /oak/stanford/groups/akundaje/marinovg/ENCODE4/ATAC/2021-05-15-NextSeq-run/juicer-L1355-Phaeodactylum_tricoturnum-HiC-MboI_MluCI-all_reads -p /oak/stanford/groups/akundaje/marinovg/genomes/Diatomes/Phaeodactylum_tricornutum-ASM15095v2/Phaeodactylum_tricornutum.ASM15095v2.20+chrM.chrom.sizes -y none -s none -z /oak/stanford/groups/akundaje/marinovg/genomes/Diatomes/Phaeodactylum_tricornutum-ASM15095v2/bwa-indexes/Phaeodactylum_tricornutum.ASM15095v2.20+chrM.fa                                                                                                                                                                                                                                                                            
Sequenced Read Pairs:  291,640,304
 Normal Paired: 217,410,244 (74.55%)
 Chimeric Paired: 0 (0.00%)
 Chimeric Ambiguous: 0 (0.00%)
 Unmapped: 74,230,060 (25.45%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 217,410,244 (74.55%)
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 14,462,674 (4.96% / 27.62%)
Hi-C Contacts: 37,896,979 (12.99% / 72.38%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 15,658,846  (5.37% / 29.91%)
Intra-chromosomal: 22,238,133  (7.63% / 42.47%)
Short Range (<20Kb): 16,771,069  (5.75% / 32.03%)
Long Range (>20Kb): 5,429,630  (1.86% / 10.37%)