Index of /kundaje/marinovg/oak/ENCODE4/datasets-Hi-C/L1355-Phaeodactylum_tricoturnum-HiC-MboI_MluCI/juicer-L1355-Phaeodactylum_tricoturnum-HiC-MboI_MluCI-all_reads-3D_DNA

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]LICENSE2021-05-19 23:35 1.0K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.0.asm2021-05-19 23:44 302  
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.0.assembly2021-05-19 23:45 1.8K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.0.cprops2021-05-19 23:38 1.5K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.0.hic2021-05-19 23:51 50M 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.0_asm.scaffold_track.txt2021-05-19 23:45 9.7K 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.0_asm.superscaf_track.txt2021-05-19 23:45 833  
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.1.asm2021-05-20 00:07 305  
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.1.assembly2021-05-20 00:09 1.9K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.1.cprops2021-05-19 23:51 1.5K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.1.hic2021-05-20 00:14 50M 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.1_asm.scaffold_track.txt2021-05-20 00:09 9.8K 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.1_asm.superscaf_track.txt2021-05-20 00:09 933  
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.2.asm2021-05-20 00:31 308  
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.2.assembly2021-05-20 00:32 1.9K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.2.cprops2021-05-20 00:14 1.5K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.2.hic2021-05-20 00:38 50M 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.2_asm.scaffold_track.txt2021-05-20 00:32 10K 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.2_asm.superscaf_track.txt2021-05-20 00:32 1.0K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.FINAL.assembly2021-05-20 01:02 2.1K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.FINAL.fasta2021-05-20 01:02 27M 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.FINAL.hic2021-05-20 01:09 50M 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.FINAL_asm.scaffold_track.txt2021-05-20 01:04 9.9K 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.FINAL_asm.superscaf_track.txt2021-05-20 01:04 933  
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.cprops2021-05-19 23:38 1.5K 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.edits.txt2021-05-20 00:14 145  
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.final.asm2021-05-20 00:54 305  
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.final.assembly2021-05-20 00:56 1.9K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.final.cprops2021-05-20 00:54 1.5K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.final.fasta2021-05-20 01:01 27M 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.final.hic2021-05-20 01:01 50M 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.polished.asm2021-05-20 00:39 310  
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.polished.cprops2021-05-20 00:38 1.5K 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.polished.edits_2D.txt2021-05-20 00:38 47  
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.polished.hic2021-05-20 00:46 50M 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.polished.mismatches_2D.txt2021-05-20 00:38 47  
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.polished.split.assembly2021-05-20 00:48 1.9K 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.polished.split.edits_2D.txt2021-05-20 00:46 47  
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.polished.split.mismatches_2D.txt2021-05-20 00:46 47  
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.polished.split.suspicious_2D.txt2021-05-20 00:46 47  
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.polished.suspect_2D.txt2021-05-20 00:38 47  
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.polished_asm.scaffold_track.txt2021-05-20 00:40 10K 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.polished_asm.superscaf_track.txt2021-05-20 00:40 1.2K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.rawchrom.asm2021-05-20 00:54 305  
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.rawchrom.assembly2021-05-20 00:56 1.9K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.rawchrom.cprops2021-05-20 00:54 1.5K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.rawchrom.fasta2021-05-20 01:01 27M 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.rawchrom.hic2021-05-20 01:01 50M 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.rawchrom_asm.scaffold_track.txt2021-05-20 00:56 9.8K 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.rawchrom_asm.superscaf_track.txt2021-05-20 00:56 1.0K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.resolved.asm2021-05-20 00:31 308  
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.resolved.cprops2021-05-20 00:14 1.5K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.resolved.hic2021-05-20 00:38 50M 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.resolved.polish.assembly2021-05-20 00:40 1.9K 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.resolved_asm.scaffold_track.txt2021-05-20 00:32 10K 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.resolved_asm.superscaf_track.txt2021-05-20 00:32 1.0K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.split.asm2021-05-20 00:46 312  
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.split.assembly2021-05-20 00:54 1.9K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.split.cprops2021-05-20 00:46 1.5K 
[ ]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.split.hic2021-05-20 00:54 50M 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.split_asm.scaffold_track.txt2021-05-20 00:48 10K 
[TXT]Phaeodactylum_tricornutum.ASM15095v2.20+chrM.split_asm.superscaf_track.txt2021-05-20 00:48 1.5K 
[TXT]README.md2021-05-19 23:35 8.7K 
[TXT]archive.Phaeodactylum_tricornutum.ASM15095v2.20+chrM.edits.at.step.1.txt2021-05-20 00:14 98  
[DIR]data/2021-05-19 23:35 -  
[DIR]edit/2021-05-19 23:35 -  
[TXT]edits.for.step.1.txt2021-05-19 23:51 98  
[TXT]edits.for.step.2.txt2021-05-20 00:14 98  
[DIR]finalize/2021-05-19 23:35 -  
[TXT]h.edits.txt2021-05-20 00:46 47  
[DIR]lift/2021-05-19 23:35 -  
[DIR]merge/2021-05-19 23:35 -  
[TXT]mismatches.at.step.0.txt2021-05-19 23:51 47  
[TXT]mismatches.at.step.1.txt2021-05-20 00:14 47  
[DIR]polish/2021-05-19 23:35 -  
[TXT]run-asm-pipeline-post-review.sh2021-05-19 23:35 11K 
[TXT]run-asm-pipeline.sh2021-05-19 23:35 44K 
[DIR]scaffold/2021-05-19 23:35 -  
[DIR]seal/2021-05-19 23:35 -  
[DIR]split/2021-05-19 23:35 -  
[DIR]split_chrom_aware/2021-05-19 23:35 -  
[DIR]supp/2021-05-19 23:35 -  
[ ]suspect.at.step.0.bed2021-05-19 23:51 11  
[ ]suspect.at.step.1.bed2021-05-20 00:14 11  
[TXT]suspect_2D.at.step.0.txt2021-05-19 23:51 98  
[TXT]suspect_2D.at.step.1.txt2021-05-20 00:14 98  
[DIR]utils/2021-05-19 23:35 -  
[DIR]visualize/2022-02-08 17:13 -  
[ ]z2021-05-19 23:36 383  
[ ]zL1109-3D.1.err2021-05-20 01:02 7.6K 
[ ]zL1109-3D.1.out2021-05-20 01:09 19K 
[ ]zL1109-3D.1.sbatch2021-05-19 23:36 588  
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