Index of /kundaje/marinovg/oak/ENCODE4/datasets-Hi-C/L1111-Cyanophora_paradoxa_Hi-C/juicer-L1111-Cyanophora_paradoxa_Hi-C-3D_DNA

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]Cyanophora_CLC_112010.0.asm2019-10-08 00:25 350K 
[ ]Cyanophora_CLC_112010.0.assembly2019-10-08 00:26 4.2M 
[ ]Cyanophora_CLC_112010.0.cprops2019-10-07 19:11 3.8M 
[ ]Cyanophora_CLC_112010.0.hic2019-10-08 00:27 16M 
[TXT]Cyanophora_CLC_112010.0_asm.scaffold_track.txt2019-10-08 00:26 9.4M 
[TXT]Cyanophora_CLC_112010.0_asm.superscaf_track.txt2019-10-08 00:26 4.2M 
[ ]Cyanophora_CLC_112010.1.asm2019-10-08 06:10 351K 
[ ]Cyanophora_CLC_112010.1.assembly2019-10-08 06:11 4.3M 
[ ]Cyanophora_CLC_112010.1.cprops2019-10-08 00:27 3.9M 
[ ]Cyanophora_CLC_112010.1.hic2019-10-08 06:12 16M 
[TXT]Cyanophora_CLC_112010.1_asm.scaffold_track.txt2019-10-08 06:11 9.5M 
[TXT]Cyanophora_CLC_112010.1_asm.superscaf_track.txt2019-10-08 06:11 4.3M 
[ ]Cyanophora_CLC_112010.2.asm2019-10-08 11:35 352K 
[ ]Cyanophora_CLC_112010.2.assembly2019-10-08 11:35 4.3M 
[ ]Cyanophora_CLC_112010.2.cprops2019-10-08 06:12 3.9M 
[ ]Cyanophora_CLC_112010.2.hic2019-10-08 11:36 16M 
[TXT]Cyanophora_CLC_112010.2_asm.scaffold_track.txt2019-10-08 11:35 9.5M 
[TXT]Cyanophora_CLC_112010.2_asm.superscaf_track.txt2019-10-08 11:35 4.3M 
[ ]Cyanophora_CLC_112010.FINAL.assembly2019-10-08 11:49 4.4M 
[ ]Cyanophora_CLC_112010.FINAL.fasta2019-10-08 11:49 77M 
[ ]Cyanophora_CLC_112010.FINAL.hic2019-10-08 11:52 17M 
[TXT]Cyanophora_CLC_112010.FINAL_asm.scaffold_track.txt2019-10-08 11:51 9.5M 
[TXT]Cyanophora_CLC_112010.FINAL_asm.superscaf_track.txt2019-10-08 11:51 4.3M 
[ ]Cyanophora_CLC_112010.cprops2019-10-07 19:11 3.8M 
[TXT]Cyanophora_CLC_112010.edits.txt2019-10-08 06:12 156K 
[ ]Cyanophora_CLC_112010.final.asm2019-10-08 11:43 351K 
[ ]Cyanophora_CLC_112010.final.assembly2019-10-08 11:44 4.3M 
[ ]Cyanophora_CLC_112010.final.cprops2019-10-08 11:43 3.9M 
[ ]Cyanophora_CLC_112010.final.fasta2019-10-08 11:45 71M 
[ ]Cyanophora_CLC_112010.final.hic2019-10-08 11:45 16M 
[ ]Cyanophora_CLC_112010.polished.asm2019-10-08 11:38 352K 
[ ]Cyanophora_CLC_112010.polished.cprops2019-10-08 11:37 3.9M 
[ ]Cyanophora_CLC_112010.polished.depletion_score_narrow.wig2019-10-08 11:37 812K 
[ ]Cyanophora_CLC_112010.polished.depletion_score_wide.wig2019-10-08 11:36 11K 
[TXT]Cyanophora_CLC_112010.polished.edits_2D.txt2019-10-08 11:37 2.9K 
[ ]Cyanophora_CLC_112010.polished.hic2019-10-08 11:40 16M 
[ ]Cyanophora_CLC_112010.polished.mismatch_narrow.bed2019-10-08 11:37 1.8K 
[ ]Cyanophora_CLC_112010.polished.mismatch_wide.bed2019-10-08 11:36 80  
[TXT]Cyanophora_CLC_112010.polished.mismatches_2D.txt2019-10-08 11:37 3.8K 
[ ]Cyanophora_CLC_112010.polished.split.assembly2019-10-08 11:42 4.3M 
[ ]Cyanophora_CLC_112010.polished.split.depletion_score_narrow.wig2019-10-08 11:40 812K 
[ ]Cyanophora_CLC_112010.polished.split.depletion_score_wide.wig2019-10-08 11:40 11K 
[TXT]Cyanophora_CLC_112010.polished.split.edits_2D.txt2019-10-08 11:40 574  
[ ]Cyanophora_CLC_112010.polished.split.mismatch_narrow.bed2019-10-08 11:40 1.4K 
[ ]Cyanophora_CLC_112010.polished.split.mismatch_wide.bed2019-10-08 11:40 80  
[TXT]Cyanophora_CLC_112010.polished.split.mismatches_2D.txt2019-10-08 11:40 2.3K 
[TXT]Cyanophora_CLC_112010.polished.split.suspicious_2D.txt2019-10-08 11:40 2.8K 
[TXT]Cyanophora_CLC_112010.polished.suspect_2D.txt2019-10-08 11:37 6.7K 
[TXT]Cyanophora_CLC_112010.polished_asm.scaffold_track.txt2019-10-08 11:39 9.5M 
[TXT]Cyanophora_CLC_112010.polished_asm.superscaf_track.txt2019-10-08 11:39 4.3M 
[ ]Cyanophora_CLC_112010.rawchrom.asm2019-10-08 11:43 351K 
[ ]Cyanophora_CLC_112010.rawchrom.assembly2019-10-08 11:44 4.3M 
[ ]Cyanophora_CLC_112010.rawchrom.cprops2019-10-08 11:43 3.9M 
[ ]Cyanophora_CLC_112010.rawchrom.fasta2019-10-08 11:45 71M 
[ ]Cyanophora_CLC_112010.rawchrom.hic2019-10-08 11:45 16M 
[TXT]Cyanophora_CLC_112010.rawchrom_asm.scaffold_track.txt2019-10-08 11:44 9.5M 
[TXT]Cyanophora_CLC_112010.rawchrom_asm.superscaf_track.txt2019-10-08 11:44 4.3M 
[ ]Cyanophora_CLC_112010.resolved.asm2019-10-08 11:35 352K 
[ ]Cyanophora_CLC_112010.resolved.cprops2019-10-08 06:12 3.9M 
[ ]Cyanophora_CLC_112010.resolved.hic2019-10-08 11:36 16M 
[ ]Cyanophora_CLC_112010.resolved.polish.assembly2019-10-08 11:39 4.3M 
[TXT]Cyanophora_CLC_112010.resolved_asm.scaffold_track.txt2019-10-08 11:35 9.5M 
[TXT]Cyanophora_CLC_112010.resolved_asm.superscaf_track.txt2019-10-08 11:35 4.3M 
[ ]Cyanophora_CLC_112010.split.asm2019-10-08 11:41 352K 
[ ]Cyanophora_CLC_112010.split.assembly2019-10-08 11:43 4.3M 
[ ]Cyanophora_CLC_112010.split.cprops2019-10-08 11:41 3.9M 
[ ]Cyanophora_CLC_112010.split.hic2019-10-08 11:43 16M 
[TXT]Cyanophora_CLC_112010.split_asm.scaffold_track.txt2019-10-08 11:42 9.5M 
[TXT]Cyanophora_CLC_112010.split_asm.superscaf_track.txt2019-10-08 11:42 4.4M 
[ ]LICENSE2019-10-07 19:10 1.0K 
[TXT]README.md2019-10-07 19:10 8.7K 
[TXT]archive.Cyanophora_CLC_112010.edits.at.step.1.txt2019-10-08 06:12 119K 
[ ]coverage_wide.at.step.0.wig2019-10-08 00:27 52K 
[ ]coverage_wide.at.step.1.wig2019-10-08 06:12 52K 
[ ]depletion_score_narrow.at.step.0.wig2019-10-08 00:27 785K 
[ ]depletion_score_narrow.at.step.1.wig2019-10-08 06:12 783K 
[ ]depletion_score_wide.at.step.0.wig2019-10-08 00:27 46K 
[ ]depletion_score_wide.at.step.1.wig2019-10-08 06:12 46K 
[TXT]edits.for.step.1.txt2019-10-08 00:27 79K 
[TXT]edits.for.step.2.txt2019-10-08 06:12 26K 
[TXT]h.edits.txt2019-10-08 11:41 874  
[ ]mismatch_narrow.at.step.0.bed2019-10-08 00:27 19K 
[ ]mismatch_narrow.at.step.1.bed2019-10-08 06:12 19K 
[ ]mismatch_wide.at.step.0.bed2019-10-08 00:27 3.8K 
[ ]mismatch_wide.at.step.1.bed2019-10-08 06:12 3.8K 
[TXT]mismatches.at.step.0.txt2019-10-08 00:27 37K 
[TXT]mismatches.at.step.1.txt2019-10-08 06:12 35K 
[ ]repeats_wide.at.step.0.bed2019-10-08 00:27 2.1K 
[ ]repeats_wide.at.step.1.bed2019-10-08 06:12 1.7K 
[TXT]run-asm-pipeline-post-review.sh2019-10-07 19:10 11K 
[TXT]run-asm-pipeline.sh2019-10-07 19:10 44K 
[ ]suspect.at.step.0.bed2019-10-08 00:27 19K 
[ ]suspect.at.step.1.bed2019-10-08 06:12 18K 
[TXT]suspect_2D.at.step.0.txt2019-10-08 00:27 115K 
[TXT]suspect_2D.at.step.1.txt2019-10-08 06:12 61K 
[ ]z2019-10-07 19:10 345  
[ ]zL1111-3D.1.err2019-10-08 11:50 1.4K 
[ ]zL1111-3D.1.out2019-10-08 11:52 111K 
[ ]zL1111-3D.1.sbatch2019-10-07 19:10 549  
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