Index of /kundaje/marinovg/oak/ENCODE4/datasets-Hi-C/L1029-Cyanophora_paradoxa_Hi-C/juicer-L1029-Cyanophora_paradoxa_Hi-C-3D_DNA

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]Cyanophora_CLC_112010.0.asm2019-09-20 10:56 350K 
[ ]Cyanophora_CLC_112010.0.assembly2019-09-20 10:57 4.2M 
[ ]Cyanophora_CLC_112010.0.cprops2019-09-20 10:12 3.8M 
[ ]Cyanophora_CLC_112010.0.hic2019-09-20 10:58 9.8M 
[TXT]Cyanophora_CLC_112010.0_asm.scaffold_track.txt2019-09-20 10:57 9.4M 
[TXT]Cyanophora_CLC_112010.0_asm.superscaf_track.txt2019-09-20 10:57 4.2M 
[ ]Cyanophora_CLC_112010.1.asm2019-09-20 11:22 380K 
[ ]Cyanophora_CLC_112010.1.assembly2019-09-20 11:23 4.8M 
[ ]Cyanophora_CLC_112010.1.cprops2019-09-20 10:59 4.3M 
[ ]Cyanophora_CLC_112010.1.hic2019-09-20 11:24 10M 
[TXT]Cyanophora_CLC_112010.1_asm.scaffold_track.txt2019-09-20 11:23 10M 
[TXT]Cyanophora_CLC_112010.1_asm.superscaf_track.txt2019-09-20 11:23 5.1M 
[ ]Cyanophora_CLC_112010.2.asm2019-09-20 11:44 403K 
[ ]Cyanophora_CLC_112010.2.assembly2019-09-20 11:45 5.2M 
[ ]Cyanophora_CLC_112010.2.cprops2019-09-20 11:24 4.7M 
[ ]Cyanophora_CLC_112010.2.hic2019-09-20 11:46 10M 
[TXT]Cyanophora_CLC_112010.2_asm.scaffold_track.txt2019-09-20 11:45 11M 
[TXT]Cyanophora_CLC_112010.2_asm.superscaf_track.txt2019-09-20 11:45 5.7M 
[ ]Cyanophora_CLC_112010.FINAL.assembly2019-09-20 11:55 4.8M 
[ ]Cyanophora_CLC_112010.FINAL.fasta2019-09-20 11:55 74M 
[ ]Cyanophora_CLC_112010.FINAL.hic2019-09-20 11:57 11M 
[TXT]Cyanophora_CLC_112010.FINAL_asm.scaffold_track.txt2019-09-20 11:56 10M 
[TXT]Cyanophora_CLC_112010.FINAL_asm.superscaf_track.txt2019-09-20 11:56 5.3M 
[ ]Cyanophora_CLC_112010.cprops2019-09-20 10:12 3.8M 
[TXT]Cyanophora_CLC_112010.edits.txt2019-09-20 11:24 1.6M 
[ ]Cyanophora_CLC_112010.final.asm2019-09-20 11:50 374K 
[ ]Cyanophora_CLC_112010.final.assembly2019-09-20 11:51 4.7M 
[ ]Cyanophora_CLC_112010.final.cprops2019-09-20 11:50 4.3M 
[ ]Cyanophora_CLC_112010.final.fasta2019-09-20 11:52 72M 
[ ]Cyanophora_CLC_112010.final.hic2019-09-20 11:51 10M 
[ ]Cyanophora_CLC_112010.polished.asm2019-09-20 11:47 407K 
[ ]Cyanophora_CLC_112010.polished.cprops2019-09-20 11:46 4.8M 
[ ]Cyanophora_CLC_112010.polished.depletion_score_narrow.wig2019-09-20 11:46 750K 
[ ]Cyanophora_CLC_112010.polished.depletion_score_wide.wig2019-09-20 11:46 11K 
[TXT]Cyanophora_CLC_112010.polished.edits_2D.txt2019-09-20 11:46 68K 
[ ]Cyanophora_CLC_112010.polished.hic2019-09-20 11:48 10M 
[ ]Cyanophora_CLC_112010.polished.mismatch_narrow.bed2019-09-20 11:46 29K 
[ ]Cyanophora_CLC_112010.polished.mismatch_wide.bed2019-09-20 11:46 53  
[TXT]Cyanophora_CLC_112010.polished.mismatches_2D.txt2019-09-20 11:46 48K 
[ ]Cyanophora_CLC_112010.polished.split.assembly2019-09-20 11:49 5.3M 
[ ]Cyanophora_CLC_112010.polished.split.depletion_score_narrow.wig2019-09-20 11:48 750K 
[ ]Cyanophora_CLC_112010.polished.split.depletion_score_wide.wig2019-09-20 11:48 11K 
[TXT]Cyanophora_CLC_112010.polished.split.edits_2D.txt2019-09-20 11:48 47  
[ ]Cyanophora_CLC_112010.polished.split.mismatch_narrow.bed2019-09-20 11:48 29K 
[ ]Cyanophora_CLC_112010.polished.split.mismatch_wide.bed2019-09-20 11:48 53  
[TXT]Cyanophora_CLC_112010.polished.split.mismatches_2D.txt2019-09-20 11:48 47  
[TXT]Cyanophora_CLC_112010.polished.split.suspicious_2D.txt2019-09-20 11:48 47  
[TXT]Cyanophora_CLC_112010.polished.suspect_2D.txt2019-09-20 11:46 116K 
[TXT]Cyanophora_CLC_112010.polished_asm.scaffold_track.txt2019-09-20 11:47 11M 
[TXT]Cyanophora_CLC_112010.polished_asm.superscaf_track.txt2019-09-20 11:47 5.9M 
[ ]Cyanophora_CLC_112010.rawchrom.asm2019-09-20 11:50 374K 
[ ]Cyanophora_CLC_112010.rawchrom.assembly2019-09-20 11:51 4.7M 
[ ]Cyanophora_CLC_112010.rawchrom.cprops2019-09-20 11:50 4.3M 
[ ]Cyanophora_CLC_112010.rawchrom.fasta2019-09-20 11:52 72M 
[ ]Cyanophora_CLC_112010.rawchrom.hic2019-09-20 11:51 10M 
[TXT]Cyanophora_CLC_112010.rawchrom_asm.scaffold_track.txt2019-09-20 11:51 10M 
[TXT]Cyanophora_CLC_112010.rawchrom_asm.superscaf_track.txt2019-09-20 11:51 5.3M 
[ ]Cyanophora_CLC_112010.resolved.asm2019-09-20 11:44 403K 
[ ]Cyanophora_CLC_112010.resolved.cprops2019-09-20 11:24 4.7M 
[ ]Cyanophora_CLC_112010.resolved.hic2019-09-20 11:46 10M 
[ ]Cyanophora_CLC_112010.resolved.polish.assembly2019-09-20 11:47 5.3M 
[TXT]Cyanophora_CLC_112010.resolved_asm.scaffold_track.txt2019-09-20 11:45 11M 
[TXT]Cyanophora_CLC_112010.resolved_asm.superscaf_track.txt2019-09-20 11:45 5.7M 
[ ]Cyanophora_CLC_112010.split.asm2019-09-20 11:49 407K 
[ ]Cyanophora_CLC_112010.split.assembly2019-09-20 11:50 5.3M 
[ ]Cyanophora_CLC_112010.split.cprops2019-09-20 11:48 4.8M 
[ ]Cyanophora_CLC_112010.split.hic2019-09-20 11:50 10M 
[TXT]Cyanophora_CLC_112010.split_asm.scaffold_track.txt2019-09-20 11:49 11M 
[TXT]Cyanophora_CLC_112010.split_asm.superscaf_track.txt2019-09-20 11:49 5.9M 
[ ]LICENSE2019-09-20 10:12 1.0K 
[TXT]README.md2019-09-20 10:12 8.7K 
[TXT]archive.Cyanophora_CLC_112010.edits.at.step.1.txt2019-09-20 11:24 965K 
[ ]coverage_wide.at.step.0.wig2019-09-20 10:58 52K 
[ ]coverage_wide.at.step.1.wig2019-09-20 11:24 52K 
[ ]depletion_score_narrow.at.step.0.wig2019-09-20 10:58 745K 
[ ]depletion_score_narrow.at.step.1.wig2019-09-20 11:24 744K 
[ ]depletion_score_wide.at.step.0.wig2019-09-20 10:58 42K 
[ ]depletion_score_wide.at.step.1.wig2019-09-20 11:24 42K 
[TXT]edits.for.step.1.txt2019-09-20 10:58 625K 
[TXT]edits.for.step.2.txt2019-09-20 11:24 476K 
[TXT]h.edits.txt2019-09-20 11:48 47  
[ ]mismatch_narrow.at.step.0.bed2019-09-20 10:58 111K 
[ ]mismatch_narrow.at.step.1.bed2019-09-20 11:24 100K 
[ ]mismatch_wide.at.step.0.bed2019-09-20 10:58 79  
[ ]mismatch_wide.at.step.1.bed2019-09-20 11:24 25  
[TXT]mismatches.at.step.0.txt2019-09-20 10:58 289K 
[TXT]mismatches.at.step.1.txt2019-09-20 11:24 271K 
[ ]repeats_wide.at.step.0.bed2019-09-20 10:58 1.5K 
[ ]repeats_wide.at.step.1.bed2019-09-20 11:24 1.9K 
[TXT]run-asm-pipeline-post-review.sh2019-09-20 10:12 11K 
[TXT]run-asm-pipeline.sh2019-09-20 10:12 44K 
[ ]suspect.at.step.0.bed2019-09-20 10:58 111K 
[ ]suspect.at.step.1.bed2019-09-20 11:24 98K 
[TXT]suspect_2D.at.step.0.txt2019-09-20 10:58 914K 
[TXT]suspect_2D.at.step.1.txt2019-09-20 11:24 747K 
Apache/2.4.66 (Ubuntu) Server at mitra.stanford.edu Port 443